miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46070_miR166:micropc
Length = 142
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgagaccacaagaaagcttcaatctttataatctttatgttaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ggaatgttgtctggctcgagaccacaagaaagcttcaatctttataatctttatgttaca 62
Query: 61 taatcacataattgatcaatctttgttgatcaatgattaaagattagaatcttgtgttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 taatcacataattgatcaatctttgttgatcaatgattaaagattagaatcttgtgttgt 122
Query: 121 cggaccaggcttcattcc 138
||||||||||||||||||
Sbjct: 123 cggaccaggcttcattcc 140
>45882_miR166:micropc
Length = 140
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgagaccacaagaaagcttcaatctttataatctttatgttaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgagaccacaagaaagcttcaatctttataatctttatgttaca 61
Query: 61 taatcacataattgatcaatctttgttgatcaatgattaaagattagaatcttgtgttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 taatcacataattgatcaatctttgttgatcaatgattaaagattagaatcttgtgttgt 121
Query: 121 cggaccaggcttcattcc 138
||||||||||||||||||
Sbjct: 122 cggaccaggcttcattcc 139
>44803_miR166:micropc
Length = 140
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgagaccacaagaaagcttcaatctttataatctttatgttaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgagaccacaagaaagcttcaatctttataatctttatgttaca 61
Query: 61 taatcacataattgatcaatctttgttgatcaatgattaaagattagaatcttgtgttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 taatcacataattgatcaatctttgttgatcaatgattaaagattagaatcttgtgttgt 121
Query: 121 cggaccaggcttcattcc 138
||||||||||||||||||
Sbjct: 122 cggaccaggcttcattcc 139
>45879_miR166:micropc
Length = 194
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 109 atcttgtgttgtcggaccaggcttcattcc 138
|||| |||| ||||||||||||||||||||
Sbjct: 165 atctggtgtcgtcggaccaggcttcattcc 194
>45567_miR166:micropc
Length = 194
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 109 atcttgtgttgtcggaccaggcttcattcc 138
|||| |||| ||||||||||||||||||||
Sbjct: 165 atctggtgtcgtcggaccaggcttcattcc 194
>45509_miR166:micropc
Length = 199
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 109 atcttgtgttgtcggaccaggcttcattcc 138
|||| |||| ||||||||||||||||||||
Sbjct: 168 atctggtgtcgtcggaccaggcttcattcc 197
>45363_miR166:micropc
Length = 197
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 109 atcttgtgttgtcggaccaggcttcattcc 138
|||| |||| ||||||||||||||||||||
Sbjct: 167 atctggtgtcgtcggaccaggcttcattcc 196
>45116_miR166:micropc
Length = 197
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 109 atcttgtgttgtcggaccaggcttcattcc 138
|||| |||| ||||||||||||||||||||
Sbjct: 167 atctggtgtcgtcggaccaggcttcattcc 196
>46788_miR166:micropc
Length = 164
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgagaccac 25
|||||||||||||||||||| ||||
Sbjct: 3 ggaatgttgtctggctcgaggccac 27
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gtcggaccaggcttcattcc 138
||||||||||||||||||||
Sbjct: 143 gtcggaccaggcttcattcc 162
>46741_miR166:micropc
Length = 151
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 gtgttgtcggaccaggcttcattcc 138
|||| ||||||||||||||||||||
Sbjct: 126 gtgtcgtcggaccaggcttcattcc 150
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
>46517_miR166:micropc
Length = 75
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 118 tgtcggaccaggcttcattcc 138
|||||||||||||||||||||
Sbjct: 53 tgtcggaccaggcttcattcc 73
>46481_miR166:micropc
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 gtgttgtcggaccaggcttcattcc 138
|||| ||||||||||||||||||||
Sbjct: 63 gtgtcgtcggaccaggcttcattcc 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
>46444_miR166:micropc
Length = 73
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 118 tgtcggaccaggcttcattcc 138
|||||||||||||||||||||
Sbjct: 52 tgtcggaccaggcttcattcc 72
>46431_miR166:micropc
Length = 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 gtgttgtcggaccaggcttcattcc 138
|||| ||||||||||||||||||||
Sbjct: 127 gtgtcgtcggaccaggcttcattcc 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 3 ggaatgttgtctggctcgag 22
>46390_miR166:micropc
Length = 151
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 gtgttgtcggaccaggcttcattcc 138
|||| ||||||||||||||||||||
Sbjct: 126 gtgtcgtcggaccaggcttcattcc 150
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
>46337_miR166:micropc
Length = 145
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 gtgttgtcggaccaggcttcattcc 138
|||| ||||||||||||||||||||
Sbjct: 120 gtgtcgtcggaccaggcttcattcc 144
>45905_miR166:micropc
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 gtgttgtcggaccaggcttcattcc 138
|||| ||||||||||||||||||||
Sbjct: 75 gtgtcgtcggaccaggcttcattcc 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
>45781_miR166:micropc
Length = 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 118 tgtcggaccaggcttcattcc 138
|||||||||||||||||||||
Sbjct: 96 tgtcggaccaggcttcattcc 116
>45748_miR166:micropc
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 gtgttgtcggaccaggcttcattcc 138
|||| ||||||||||||||||||||
Sbjct: 75 gtgtcgtcggaccaggcttcattcc 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
>45518_miR166:micropc
Length = 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 gtgttgtcggaccaggcttcattcc 138
|||| ||||||||||||||||||||
Sbjct: 106 gtgtcgtcggaccaggcttcattcc 130
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
>45045_miR166:micropc
Length = 149
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 gtgttgtcggaccaggcttcattcc 138
|||| ||||||||||||||||||||
Sbjct: 125 gtgtcgtcggaccaggcttcattcc 149
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 1 ggaatgttgtctggctcgag 20
>45037_miR166:micropc
Length = 71
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 118 tgtcggaccaggcttcattcc 138
|||||||||||||||||||||
Sbjct: 51 tgtcggaccaggcttcattcc 71
>45008_miR166:micropc
Length = 73
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 118 tgtcggaccaggcttcattcc 138
|||||||||||||||||||||
Sbjct: 52 tgtcggaccaggcttcattcc 72
>44945_miR166:micropc
Length = 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 118 tgtcggaccaggcttcattcc 138
|||||||||||||||||||||
Sbjct: 96 tgtcggaccaggcttcattcc 116
>44943_miR166:micropc
Length = 149
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 gtgttgtcggaccaggcttcattcc 138
|||| ||||||||||||||||||||
Sbjct: 125 gtgtcgtcggaccaggcttcattcc 149
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 1 ggaatgttgtctggctcgag 20
>44893_miR166:micropc
Length = 162
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgagaccac 25
|||||||||||||||||||| ||||
Sbjct: 2 ggaatgttgtctggctcgaggccac 26
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gtcggaccaggcttcattcc 138
||||||||||||||||||||
Sbjct: 142 gtcggaccaggcttcattcc 161
>44795_miR166:micropc
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgagaccac 25
|||||||||||||||||||| ||||
Sbjct: 1 ggaatgttgtctggctcgaggccac 25
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gtcggaccaggcttcattcc 138
||||||||||||||||||||
Sbjct: 141 gtcggaccaggcttcattcc 160
>46839_miR166:micropc
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
>46834_miR166:micropc
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 1 ggaatgttgtctggctcgag 20
>46806_miR166:micropc
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 1 ggaatgttgtctggctcgag 20
>46784_miR166:micropc
Length = 138
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gtcggaccaggcttcattcc 138
||||||||||||||||||||
Sbjct: 118 gtcggaccaggcttcattcc 137
>46743_miR166:micropc
Length = 122
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 1 ggaatgttgtctggctcgag 20
>46731_miR166:micropc
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
>46590_miR166:micropc
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 1 ggaatgttgtctggctcgag 20
>46452_miR166:micropc
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 1 ggaatgttgtctggctcgag 20
>46438_miR166:micropc
Length = 74
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gtcggaccaggcttcattcc 138
||||||||||||||||||||
Sbjct: 55 gtcggaccaggcttcattcc 74
>46436_miR166:micropc
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 1 ggaatgttgtctggctcgag 20
>46376_miR166:micropc
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
>46335_miR166:micropc
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gtcggaccaggcttcattcc 138
||||||||||||||||||||
Sbjct: 79 gtcggaccaggcttcattcc 98
>46273_miR166:micropc
Length = 138
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gtcggaccaggcttcattcc 138
||||||||||||||||||||
Sbjct: 118 gtcggaccaggcttcattcc 137
>46248_miR166:micropc
Length = 76
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gtcggaccaggcttcattcc 138
||||||||||||||||||||
Sbjct: 56 gtcggaccaggcttcattcc 75
>46212_miR166:micropc
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
>46204_miR166:micropc
Length = 76
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gtcggaccaggcttcattcc 138
||||||||||||||||||||
Sbjct: 56 gtcggaccaggcttcattcc 75
>45927_miR166:micropc
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
>45764_miR166:micropc
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gtcggaccaggcttcattcc 138
||||||||||||||||||||
Sbjct: 79 gtcggaccaggcttcattcc 98
>45417_miR166:micropc
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 4 ggaatgttgtctggctcgag 23
>45117_miR166:micropc
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
>45034_miR166:micropc
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 3 ggaatgttgtctggctcgag 22
>45032_miR166:micropc
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 3 ggaatgttgtctggctcgag 22
>45026_miR166:micropc
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
>45017_miR166:micropc
Length = 178
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gtcggaccaggcttcattcc 138
||||||||||||||||||||
Sbjct: 158 gtcggaccaggcttcattcc 177
>44979_miR166:micropc
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttgtctggctcgag 20
||||||||||||||||||||
Sbjct: 2 ggaatgttgtctggctcgag 21
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gtcggaccaggcttcattcc 138
||||||||||||||||||||
Sbjct: 79 gtcggaccaggcttcattcc 98
>44922_miR166:micropc
Length = 78
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 gtcggaccaggcttcattcc 138
||||||||||||||||||||
Sbjct: 57 gtcggaccaggcttcattcc 76
