miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45502_miR390:micropc
Length = 68
Score = 135 bits (68), Expect = 4e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcaccatgaatacatcttaataactatctatagcgctatccatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcaccatgaatacatcttaataactatctatagcgctatccatc 60
Query: 61 ttgagttt 68
||||||||
Sbjct: 61 ttgagttt 68
>45082_miR390:micropc
Length = 68
Score = 135 bits (68), Expect = 4e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcaccatgaatacatcttaataactatctatagcgctatccatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcaccatgaatacatcttaataactatctatagcgctatccatc 60
Query: 61 ttgagttt 68
||||||||
Sbjct: 61 ttgagttt 68
>45612_miR390:micropc
Length = 88
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcaccatg 24
||||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcaccatg 24
>44796_miR390:micropc
Length = 87
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcaccatg 24
||||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcaccatg 24
>46582_miR390:micropc
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcaccatg 24
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
>46562_miR390:micropc
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcaccatg 24
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 45 tatagcgctatccatcttgagttt 68
|||||||||||||||| |||||||
Sbjct: 73 tatagcgctatccatcctgagttt 96
>46339_miR390:micropc
Length = 71
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcaccatg 24
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
>46099_miR390:micropc
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcaccatg 24
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
>45789_miR390:micropc
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcaccatg 24
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
>45779_miR390:micropc
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcaccatg 24
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 45 tatagcgctatccatcttgagttt 68
|||||||||||||||| |||||||
Sbjct: 73 tatagcgctatccatcctgagttt 96
>45682_miR390:micropc
Length = 71
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcaccatg 24
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
>45362_miR390:micropc
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcaccatg 24
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 45 tatagcgctatccatcttgagttt 68
|||||||||||||||| |||||||
Sbjct: 73 tatagcgctatccatcctgagttt 96
>45123_miR390:micropc
Length = 72
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcaccatg 24
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
>44966_miR390:micropc
Length = 98
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aagctcaggagggatagcaccatg 24
|||||||||||||||||| |||||
Sbjct: 1 aagctcaggagggatagcgccatg 24
>46796_miR390:micropc
Length = 95
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 agctcaggagggatagcaccatg 24
||||||||||||||||| |||||
Sbjct: 1 agctcaggagggatagcgccatg 23
>45647_miR390:micropc
Length = 94
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 agctcaggagggatagcaccatg 24
||||||||||||||||| |||||
Sbjct: 1 agctcaggagggatagcgccatg 23
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 45 tatagcgctatccatcttgagtt 67
|||||||||||||||| ||||||
Sbjct: 72 tatagcgctatccatcctgagtt 94
>45151_miR390:micropc
Length = 69
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 agctcaggagggatagcaccatg 24
||||||||||||||||| |||||
Sbjct: 1 agctcaggagggatagcgccatg 23