miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46397_miR403:micropc
          Length = 117

 Score =  224 bits (113), Expect = 1e-59
 Identities = 116/117 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgtgtttgtgcgtgaatctaaggatccttaatcttatcaaatcaccagtaatcatacttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cgtgtttgtgcgtgaatctaaggatccttaatcttatcaaatcaccagtaatcatacttt 60

                                                                    
Query: 61  ttgtttgtttgttgccagacaggatctgttggttcgttagattcacgcacaaactcg 117
           ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttgtttgtttgtttccagacaggatctgttggttcgttagattcacgcacaaactcg 117




>46843_miR403:micropc
          Length = 117

 Score =  208 bits (105), Expect = 7e-55
 Identities = 114/117 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgtgtttgtgcgtgaatctaaggatccttaatcttatcaaatcaccagtaatcatacttt 60
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1   cgtgtttgtgcgtgaatctaaggatccttaatcttatcacatcaccagtaatcatacttt 60

                                                                    
Query: 61  ttgtttgtttgttgccagacaggatctgttggttcgttagattcacgcacaaactcg 117
           |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttgtttgtctgttgccagtcaggatctgttggttcgttagattcacgcacaaactcg 117




>46234_miR403:micropc
          Length = 125

 Score =  165 bits (83), Expect = 9e-42
 Identities = 115/125 (92%), Gaps = 8/125 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgtgtttgtgcgtgaatctaaggatccttaatcttatcaaatcaccagtaa----tcata 56
           ||||||||||||||||||||||||||||||||||||||| |||||||||||    |||||
Sbjct: 1   cgtgtttgtgcgtgaatctaaggatccttaatcttatcacatcaccagtaagtaatcata 60

                                                                       
Query: 57  ctttttgtttgt----ttgttgccagacaggatctgttggttcgttagattcacgcacaa 112
           |||||| |||||    ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctttttctttgtctgtttgttgccagacaggatctgttggttcgttagattcacgcacaa 120

                
Query: 113 actcg 117
           |||||
Sbjct: 121 actcg 125




>46200_miR403:micropc
          Length = 125

 Score =  165 bits (83), Expect = 9e-42
 Identities = 115/125 (92%), Gaps = 8/125 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgtgtttgtgcgtgaatctaaggatccttaatcttatcaaatcaccagtaa----tcata 56
           ||||||||||||||||||||||||||||||||||||||| |||||||||||    |||||
Sbjct: 1   cgtgtttgtgcgtgaatctaaggatccttaatcttatcacatcaccagtaagtaatcata 60

                                                                       
Query: 57  ctttttgtttgt----ttgttgccagacaggatctgttggttcgttagattcacgcacaa 112
           |||||| |||||    ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctttttctttgtctgtttgttgccagacaggatctgttggttcgttagattcacgcacaa 120

                
Query: 113 actcg 117
           |||||
Sbjct: 121 actcg 125




>45766_miR403:micropc
          Length = 125

 Score =  165 bits (83), Expect = 9e-42
 Identities = 115/125 (92%), Gaps = 8/125 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgtgtttgtgcgtgaatctaaggatccttaatcttatcaaatcaccagtaa----tcata 56
           ||||||||||||||||||||||||||||||||||||||| |||||||||||    |||||
Sbjct: 1   cgtgtttgtgcgtgaatctaaggatccttaatcttatcacatcaccagtaagtaatcata 60

                                                                       
Query: 57  ctttttgtttgt----ttgttgccagacaggatctgttggttcgttagattcacgcacaa 112
           |||||| |||||    ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctttttctttgtctgtttgttgccagacaggatctgttggttcgttagattcacgcacaa 120

                
Query: 113 actcg 117
           |||||
Sbjct: 121 actcg 125




>45615_miR403:micropc
          Length = 125

 Score =  165 bits (83), Expect = 9e-42
 Identities = 115/125 (92%), Gaps = 8/125 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgtgtttgtgcgtgaatctaaggatccttaatcttatcaaatcaccagtaa----tcata 56
           ||||||||||||||||||||||||||||||||||||||| |||||||||||    |||||
Sbjct: 1   cgtgtttgtgcgtgaatctaaggatccttaatcttatcacatcaccagtaagtaatcata 60

                                                                       
Query: 57  ctttttgtttgt----ttgttgccagacaggatctgttggttcgttagattcacgcacaa 112
           |||||| |||||    ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctttttctttgtctgtttgttgccagacaggatctgttggttcgttagattcacgcacaa 120

                
Query: 113 actcg 117
           |||||
Sbjct: 121 actcg 125




>45432_miR403:micropc
          Length = 109

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 96  gttagattcacgcacaaactcg 117
           ||||||||||||||||||||||
Sbjct: 88  gttagattcacgcacaaactcg 109




>45272_miR403:micropc
          Length = 73

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 98  tagattcacgcacaaactcg 117
           ||||||||||||||||||||
Sbjct: 54  tagattcacgcacaaactcg 73