miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45268_miR167:micropc
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcgtgatctcaacttttctggtctcttaaaggaaagatcagatcatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaagctgccagcgtgatctcaacttttctggtctcttaaaggaaagatcagatcatgtg 60
Query: 61 gcagcttca 69
|||||||||
Sbjct: 61 gcagcttca 69
>46078_miR167:micropc
Length = 78
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 aaggaaagatcagatcatgtggcagcttca 69
|||||||||||||||||| ||| |||||||
Sbjct: 49 aaggaaagatcagatcatatggtagcttca 78
>45974_miR167:micropc
Length = 78
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 aaggaaagatcagatcatgtggcagcttca 69
|||||||||||||||||| ||| |||||||
Sbjct: 49 aaggaaagatcagatcatatggtagcttca 78
>45908_miR167:micropc
Length = 71
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 aaggaaagatcagatcatgtggcagcttca 69
||||||||||| |||||| |||||||||||
Sbjct: 42 aaggaaagatcggatcatatggcagcttca 71
>45795_miR167:micropc
Length = 71
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 aaggaaagatcagatcatgtggcagcttca 69
||||||||||| |||||| |||||||||||
Sbjct: 42 aaggaaagatcggatcatatggcagcttca 71
>45483_miR167:micropc
Length = 71
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 40 aaggaaagatcagatcatgtggcagcttca 69
||||||||||| |||||| |||||||||||
Sbjct: 42 aaggaaagatcggatcatatggcagcttca 71
>45329_miR167:micropc
Length = 69
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 41 aggaaagatcagatcatgtggcagcttca 69
|||| ||||||||||||||||||| ||||
Sbjct: 41 aggagagatcagatcatgtggcagtttca 69
>44939_miR167:micropc
Length = 69
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 41 aggaaagatcagatcatgtggcagcttca 69
|||| ||||||||||||||||||| ||||
Sbjct: 41 aggagagatcagatcatgtggcagtttca 69
>46533_miR167:micropc
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 45 aagatcagatcatgtggcag 64
||||||||||||||||||||
Sbjct: 62 aagatcagatcatgtggcag 81
>46195_miR167:micropc
Length = 67
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 40 aaggaaagatcagatcatgtggcagctt 67
||||||||||| |||||| |||||||||
Sbjct: 40 aaggaaagatcggatcatatggcagctt 67
>46170_miR167:micropc
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 45 aagatcagatcatgtggcag 64
||||||||||||||||||||
Sbjct: 64 aagatcagatcatgtggcag 83
>45462_miR167:micropc
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 agatcagatcatgtggcagcttca 69
||||||||||||||||||| ||||
Sbjct: 53 agatcagatcatgtggcagtttca 76
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcgtgatctcaacttt 27
||||||||||||| |||||| ||||||
Sbjct: 1 tgaagctgccagcatgatcttaacttt 27
>45389_miR167:micropc
Length = 65
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 41 aggaaagatcagatcatgtggcag 64
|||| |||||||||||||||||||
Sbjct: 39 aggagagatcagatcatgtggcag 62
>44797_miR167:micropc
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 46 agatcagatcatgtggcagcttca 69
||||||||||||||||||| ||||
Sbjct: 53 agatcagatcatgtggcagtttca 76
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcgtgatctcaacttt 27
||||||||||||| |||||| ||||||
Sbjct: 1 tgaagctgccagcatgatcttaacttt 27
>46424_miR167:micropc
Length = 72
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 46 agatcagatcatgtggcag 64
|||||||||||||||||||
Sbjct: 51 agatcagatcatgtggcag 69
>45652_miR167:micropc
Length = 74
Score = 38.2 bits (19), Expect = 7e-04
Identities = 29/31 (93%), Gaps = 1/31 (3%)
Strand = Plus / Minus
Query: 40 aaggaaagatcagatcatg-tggcagcttca 69
|||||||| |||||||||| |||||||||||
Sbjct: 31 aaggaaagttcagatcatgctggcagcttca 1
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcgtgatctcaacttt 27
||||||||||||| |||||| ||||||
Sbjct: 1 tgaagctgccagcatgatctgaacttt 27
>45259_miR167:micropc
Length = 74
Score = 38.2 bits (19), Expect = 7e-04
Identities = 29/31 (93%), Gaps = 1/31 (3%)
Strand = Plus / Minus
Query: 40 aaggaaagatcagatcatg-tggcagcttca 69
|||||||| |||||||||| |||||||||||
Sbjct: 31 aaggaaagttcagatcatgctggcagcttca 1
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 tgaagctgccagcgtgatctcaacttt 27
||||||||||||| |||||| ||||||
Sbjct: 1 tgaagctgccagcatgatctgaacttt 27
