miRNEST 2.0, an integrative microRNA resource :: BLAST
>45587_miR156:micropc
Length = 90
Score = 178 bits (90), Expect = 5e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 2 gacagaagagagtgagcatatgcaagcaattgtatagagagatatgctcttgttgtaatt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacagaagagagtgagcatatgcaagcaattgtatagagagatatgctcttgttgtaatt 60
Query: 62 atgatgcgtgtgctcacttctcttgctgtc 91
||||||||||||||||||||||||||||||
Sbjct: 61 atgatgcgtgtgctcacttctcttgctgtc 90
>46798_miR156:micropc
Length = 86
Score = 87.7 bits (44), Expect = 1e-18
Identities = 81/92 (88%), Gaps = 6/92 (6%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcatatgcaagcaattgtatagagagatatgctcttgttgtaat 60
|||||||||||||||||||||||||| ||||||||||||||| ||| | ||||| |||
Sbjct: 1 tgacagaagagagtgagcatatgcaaacaattgtatagagaggtatacacttgt--aaat 58
Query: 61 tatgatgcgtgtgctcacttctcttgctgtca 92
||||||||||||||||||||||||||||
Sbjct: 59 ----atgcgtgtgctcacttctcttgctgtca 86
>45125_miR156:micropc
Length = 84
Score = 83.8 bits (42), Expect = 2e-17
Identities = 79/90 (87%), Gaps = 6/90 (6%)
Strand = Plus / Plus
Query: 2 gacagaagagagtgagcatatgcaagcaattgtatagagagatatgctcttgttgtaatt 61
||||||||||||||||||||||||| ||||||||||||||| ||| | ||||| |||
Sbjct: 1 gacagaagagagtgagcatatgcaaacaattgtatagagaggtatacacttgt--aaat- 57
Query: 62 atgatgcgtgtgctcacttctcttgctgtc 91
|||||||||||||||||||||||||||
Sbjct: 58 ---atgcgtgtgctcacttctcttgctgtc 84
>45062_miR156:micropc
Length = 91
Score = 79.8 bits (40), Expect = 3e-16
Identities = 83/94 (88%), Gaps = 5/94 (5%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcatatgc-aagcaattgtatagagaga-tatgctcttgttgta 58
|||||||||||||||||||||||| ||||||||||||||| | | ||| | |||||| |
Sbjct: 1 tgacagaagagagtgagcatatgcaaagcaattgtatagaaaaactatacatttgttgga 60
Query: 59 attatgatgcgtgtgctcacttctcttgctgtca 92
||| ||||||||||||||||||||||||||||
Sbjct: 61 att---atgcgtgtgctcacttctcttgctgtca 91
>45047_miR156:micropc
Length = 91
Score = 79.8 bits (40), Expect = 3e-16
Identities = 83/94 (88%), Gaps = 5/94 (5%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcatatgc-aagcaattgtatagagaga-tatgctcttgttgta 58
|||||||||||||||||||||||| ||||||||||||||| | | ||| | |||||| |
Sbjct: 1 tgacagaagagagtgagcatatgcaaagcaattgtatagaaaaactatacatttgttgga 60
Query: 59 attatgatgcgtgtgctcacttctcttgctgtca 92
||| ||||||||||||||||||||||||||||
Sbjct: 61 att---atgcgtgtgctcacttctcttgctgtca 91
>45582_miR156:micropc
Length = 89
Score = 75.8 bits (38), Expect = 5e-15
Identities = 81/92 (88%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 2 gacagaagagagtgagcatatgc-aagcaattgtatagagaga-tatgctcttgttgtaa 59
||||||||||||||||||||||| ||||||||||||||| | | ||| | |||||| ||
Sbjct: 1 gacagaagagagtgagcatatgcaaagcaattgtatagaaaaactatacatttgttggaa 60
Query: 60 ttatgatgcgtgtgctcacttctcttgctgtc 91
|| |||||||||||||||||||||||||||
Sbjct: 61 tt---atgcgtgtgctcacttctcttgctgtc 89
>45113_miR156:micropc
Length = 89
Score = 75.8 bits (38), Expect = 5e-15
Identities = 81/92 (88%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 2 gacagaagagagtgagcatatgc-aagcaattgtatagagaga-tatgctcttgttgtaa 59
||||||||||||||||||||||| ||||||||||||||| | | ||| | |||||| ||
Sbjct: 1 gacagaagagagtgagcatatgcaaagcaattgtatagaaaaactatacatttgttggaa 60
Query: 60 ttatgatgcgtgtgctcacttctcttgctgtc 91
|| |||||||||||||||||||||||||||
Sbjct: 61 tt---atgcgtgtgctcacttctcttgctgtc 89
>45810_miR156:micropc
Length = 91
Score = 71.9 bits (36), Expect = 8e-14
Identities = 82/94 (87%), Gaps = 5/94 (5%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcatatgc-aagcaattgtatagagaga-tatgctcttgttgta 58
|||||||||||||||||||||||| ||||||||||||||| | | ||| | |||||| |
Sbjct: 1 tgacagaagagagtgagcatatgcaaagcaattgtatagaaaaactatacatttgttgga 60
Query: 59 attatgatgcgtgtgctcacttctcttgctgtca 92
||| |||||||||| |||||||||||||||||
Sbjct: 61 att---atgcgtgtgcccacttctcttgctgtca 91
>44842_miR156:micropc
Length = 91
Score = 71.9 bits (36), Expect = 8e-14
Identities = 82/94 (87%), Gaps = 5/94 (5%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcatatgc-aagcaattgtatagagaga-tatgctcttgttgta 58
|||||||||||||||||||||||| ||||||||||||| | | | ||| | |||||| |
Sbjct: 1 tgacagaagagagtgagcatatgcaaagcaattgtataaaaaaactatacatttgttgga 60
Query: 59 attatgatgcgtgtgctcacttctcttgctgtca 92
||| ||||||||||||||||||||||||||||
Sbjct: 61 att---atgcgtgtgctcacttctcttgctgtca 91
>45659_miR156:micropc
Length = 89
Score = 67.9 bits (34), Expect = 1e-12
Identities = 80/92 (86%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 2 gacagaagagagtgagcatatgc-aagcaattgtatagagaga-tatgctcttgttgtaa 59
||||||||||||||||||||||| ||||||||||||||| | | ||| | |||||| ||
Sbjct: 1 gacagaagagagtgagcatatgcaaagcaattgtatagaaaaactatacatttgttggaa 60
Query: 60 ttatgatgcgtgtgctcacttctcttgctgtc 91
|| |||||||||| ||||||||||||||||
Sbjct: 61 tt---atgcgtgtgcccacttctcttgctgtc 89
>45528_miR156:micropc
Length = 89
Score = 67.9 bits (34), Expect = 1e-12
Identities = 80/92 (86%), Gaps = 5/92 (5%)
Strand = Plus / Plus
Query: 2 gacagaagagagtgagcatatgc-aagcaattgtatagagaga-tatgctcttgttgtaa 59
||||||||||||||||||||||| ||||||||||||| | | | ||| | |||||| ||
Sbjct: 1 gacagaagagagtgagcatatgcaaagcaattgtataaaaaaactatacatttgttggaa 60
Query: 60 ttatgatgcgtgtgctcacttctcttgctgtc 91
|| |||||||||||||||||||||||||||
Sbjct: 61 tt---atgcgtgtgctcacttctcttgctgtc 89
>45385_miR156:micropc
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 79/93 (84%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcatatgcaagcaattgtatagagagat-atgctcttgttgtaa 59
||||||||||||||||||| | || |||| |||||| ||||| || ||||||||| ||
Sbjct: 1 tgacagaagagagtgagcacaggccggcaactgtatacggagattatactcttgttggaa 60
Query: 60 ttatgatgcgtgtgctcacttctcttgctgtca 92
||||| |||||||||||||||||| ||||||
Sbjct: 61 ttatg---cgtgtgctcacttctctttctgtca 90
>45182_miR156:micropc
Length = 90
Score = 61.9 bits (31), Expect = 7e-11
Identities = 79/93 (84%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcatatgcaagcaattgtatagagagat-atgctcttgttgtaa 59
||||||||||||||||||| | || |||| |||||| ||||| || ||||||||| ||
Sbjct: 1 tgacagaagagagtgagcacaggccggcaactgtatacggagattatactcttgttggaa 60
Query: 60 ttatgatgcgtgtgctcacttctcttgctgtca 92
||||| |||||||||||||||||| ||||||
Sbjct: 61 ttatg---cgtgtgctcacttctctttctgtca 90
>46069_miR156:micropc
Length = 88
Score = 58.0 bits (29), Expect = 1e-09
Identities = 77/91 (84%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 2 gacagaagagagtgagcatatgcaagcaattgtatagagagat-atgctcttgttgtaat 60
|||||||||||||||||| | || |||| |||||| ||||| || ||||||||| |||
Sbjct: 1 gacagaagagagtgagcacaggccggcaactgtatacggagattatactcttgttggaat 60
Query: 61 tatgatgcgtgtgctcacttctcttgctgtc 91
|||| |||||||||||||||||| |||||
Sbjct: 61 tatg---cgtgtgctcacttctctttctgtc 88
>46709_miR156:micropc
Length = 90
Score = 54.0 bits (27), Expect = 2e-08
Identities = 78/93 (83%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcatatgcaagcaattgtatagagaga-tatgctcttgttgtaa 59
||||||||||||||||||| || |||| ||||| ||||| ||| ||||||||| ||
Sbjct: 1 tgacagaagagagtgagcactcgccggcaaccgtatatagagattatactcttgttggaa 60
Query: 60 ttatgatgcgtgtgctcacttctcttgctgtca 92
|| ||||||||||||||||||||| ||||||
Sbjct: 61 tt---atgcgtgtgctcacttctctttctgtca 90
>46842_miR156:micropc
Length = 84
Score = 50.1 bits (25), Expect = 3e-07
Identities = 70/83 (84%), Gaps = 4/83 (4%)
Strand = Plus / Plus
Query: 4 cagaagagagtgagcatatgcaagcaattgtatagagagat-atgctcttgttgtaatta 62
|||||||||||||||| | || |||| |||||| ||||| || ||||||||| |||||
Sbjct: 1 cagaagagagtgagcacaggccggcaactgtatacggagattatactcttgttggaatta 60
Query: 63 tgatgcgtgtgctcacttctctt 85
|| ||||||||||||||||||
Sbjct: 61 tg---cgtgtgctcacttctctt 80
>46803_miR156:micropc
Length = 88
Score = 50.1 bits (25), Expect = 3e-07
Identities = 76/91 (83%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 2 gacagaagagagtgagcatatgcaagcaattgtatagagaga-tatgctcttgttgtaat 60
|||||||||||||||||| || |||| ||||| ||||| ||| ||||||||| |||
Sbjct: 1 gacagaagagagtgagcactcgccggcaaccgtatatagagattatactcttgttggaat 60
Query: 61 tatgatgcgtgtgctcacttctcttgctgtc 91
| ||||||||||||||||||||| |||||
Sbjct: 61 t---atgcgtgtgctcacttctctttctgtc 88
>46151_miR156:micropc
Length = 99
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 2 gacagaagagagtgagcatatgcaagcaattgtatag 38
||||||||||||||||||| ||| ||||||||||||
Sbjct: 1 gacagaagagagtgagcatccgcaggcaattgtatag 37
>46153_miR156:micropc
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 66 tgcgtgtgctcacttctcttgctgtca 92
|||||||||||||||||||| ||||||
Sbjct: 66 tgcgtgtgctcacttctctttctgtca 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcatatgcaagcaattgtata 37
||||||||||||||||||| | ||| ||||||||||
Sbjct: 1 tgacagaagagagtgagcacacgcacacaattgtata 37
>45524_miR156:micropc
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 66 tgcgtgtgctcacttctcttgctgtca 92
|||||||||||||||||||| ||||||
Sbjct: 66 tgcgtgtgctcacttctctttctgtca 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcatatgcaagcaattgtata 37
||||||||||||||||||| | ||| ||||||||||
Sbjct: 1 tgacagaagagagtgagcacacgcacacaattgtata 37
>44793_miR156:micropc
Length = 88
Score = 46.1 bits (23), Expect = 4e-06
Identities = 70/85 (82%), Gaps = 3/85 (3%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcatatgcaagcaattgtatagagagatatgctcttgttgtaat 60
||||||||||||||||| | | ||| |||||||||||| | ||| |||||||| | |
Sbjct: 1 tgacagaagagagtgagtacacgcaggcaattgtatagtggactatactcttgtttgagt 60
Query: 61 tatgatgcgtgtgctcacttctctt 85
| |||||||||||||||||||||
Sbjct: 61 t---atgcgtgtgctcacttctctt 82
>46707_miR156:micropc
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 66 tgcgtgtgctcacttctcttgctgtc 91
|||||||||||||||||||| |||||
Sbjct: 65 tgcgtgtgctcacttctctttctgtc 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 2 gacagaagagagtgagcatatgcaagcaattgtata 37
|||||||||||||||||| | ||| ||||||||||
Sbjct: 1 gacagaagagagtgagcacacgcacacaattgtata 36
>46146_miR156:micropc
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 atgcgtgtgctcacttctctt 85
|||||||||||||||||||||
Sbjct: 60 atgcgtgtgctcacttctctt 80
>46794_miR156:micropc
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcatatgc 24
||||||||||||||||||| ||||
Sbjct: 1 tgacagaagagagtgagcacatgc 24
>46066_miR156:micropc
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 66 tgcgtgtgctcacttctctt 85
||||||||||||||||||||
Sbjct: 63 tgcgtgtgctcacttctctt 82
>45863_miR156:micropc
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgacagaagagagtgagcatatgc 24
||||||||||||||||||| ||||
Sbjct: 1 tgacagaagagagtgagcacatgc 24
