miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>46573_miR169:micropc
          Length = 109

 Score =  216 bits (109), Expect = 3e-57
 Identities = 109/109 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   agccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctccg 60

                                                            
Query: 61  tgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 109
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 109




>45957_miR169:micropc
          Length = 110

 Score =  216 bits (109), Expect = 3e-57
 Identities = 109/109 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   agccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   agccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctccg 61

                                                            
Query: 61  tgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 109
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  tgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 110




>45092_miR169:micropc
          Length = 109

 Score =  216 bits (109), Expect = 3e-57
 Identities = 109/109 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   agccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctccg 60

                                                            
Query: 61  tgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 109
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 109




>44851_miR169:micropc
          Length = 110

 Score =  216 bits (109), Expect = 3e-57
 Identities = 109/109 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   agccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   agccaaggatgacttgccgactctctttcttcctatttatttggattggatctatctccg 61

                                                            
Query: 61  tgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 109
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  tgtatgttaaattaatggaaataatgaagttggcaagttgttcttggct 110




>46837_miR169:micropc
          Length = 126

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  agccaaggatgacttgccgact 22
          ||||||||||||||||||||||
Sbjct: 1  agccaaggatgacttgccgact 22




>46631_miR169:micropc
          Length = 126

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  agccaaggatgacttgccgact 22
          ||||||||||||||||||||||
Sbjct: 1  agccaaggatgacttgccgact 22




>46378_miR169:micropc
          Length = 127

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  agccaaggatgacttgccgact 22
          ||||||||||||||||||||||
Sbjct: 2  agccaaggatgacttgccgact 23




>45596_miR169:micropc
          Length = 127

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  agccaaggatgacttgccgact 22
          ||||||||||||||||||||||
Sbjct: 2  agccaaggatgacttgccgact 23




>45539_miR169:micropc
          Length = 126

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 1  agccaaggatgacttgccgact 22
          ||||||||||||||||||||||
Sbjct: 1  agccaaggatgacttgccgact 22




>46208_miR169:micropc
          Length = 100

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  agccaaggatgacttgccgac 21
          |||||||||||||||||||||
Sbjct: 2  agccaaggatgacttgccgac 22




>45625_miR169:micropc
          Length = 99

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  agccaaggatgacttgccgac 21
          |||||||||||||||||||||
Sbjct: 1  agccaaggatgacttgccgac 21




>45442_miR169:micropc
          Length = 99

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  agccaaggatgacttgccgac 21
          |||||||||||||||||||||
Sbjct: 1  agccaaggatgacttgccgac 21




>44868_miR169:micropc
          Length = 100

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  agccaaggatgacttgccgac 21
          |||||||||||||||||||||
Sbjct: 2  agccaaggatgacttgccgac 22




>46708_miR169:micropc
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  agccaaggatgacttgccga 20
          ||||||||||||||||||||
Sbjct: 1  agccaaggatgacttgccga 20



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ttggcaagttgttcttggct 109
           ||||||||||||||||||||
Sbjct: 74  ttggcaagttgttcttggct 93




>46695_miR169:micropc
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  agccaaggatgacttgccga 20
          ||||||||||||||||||||
Sbjct: 1  agccaaggatgacttgccga 20



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ttggcaagttgttcttggct 109
           ||||||||||||||||||||
Sbjct: 74  ttggcaagttgttcttggct 93




>46644_miR169:micropc
          Length = 83

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  agccaaggatgacttgccgactct 24
          |||||||||||||||||| |||||
Sbjct: 2  agccaaggatgacttgcctactct 25




>46532_miR169:micropc
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  agccaaggatgacttgccga 20
          ||||||||||||||||||||
Sbjct: 1  agccaaggatgacttgccga 20



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ttggcaagttgttcttggct 109
           ||||||||||||||||||||
Sbjct: 74  ttggcaagttgttcttggct 93




>46455_miR169:micropc
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  agccaaggatgacttgccga 20
          ||||||||||||||||||||
Sbjct: 1  agccaaggatgacttgccga 20



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ttggcaagttgttcttggct 109
           ||||||||||||||||||||
Sbjct: 74  ttggcaagttgttcttggct 93




>46177_miR169:micropc
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  agccaaggatgacttgccga 20
          ||||||||||||||||||||
Sbjct: 1  agccaaggatgacttgccga 20



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ttggcaagttgttcttggct 109
           ||||||||||||||||||||
Sbjct: 74  ttggcaagttgttcttggct 93




>45996_miR169:micropc
          Length = 81

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  agccaaggatgacttgccgactct 24
          |||||||||||||||||| |||||
Sbjct: 1  agccaaggatgacttgcctactct 24




>45932_miR169:micropc
          Length = 94

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  agccaaggatgacttgccga 20
          ||||||||||||||||||||
Sbjct: 2  agccaaggatgacttgccga 21



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ttggcaagttgttcttggct 109
           ||||||||||||||||||||
Sbjct: 75  ttggcaagttgttcttggct 94




>45912_miR169:micropc
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  agccaaggatgacttgccga 20
          ||||||||||||||||||||
Sbjct: 1  agccaaggatgacttgccga 20



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ttggcaagttgttcttggct 109
           ||||||||||||||||||||
Sbjct: 74  ttggcaagttgttcttggct 93




>45791_miR169:micropc
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  agccaaggatgacttgccga 20
          ||||||||||||||||||||
Sbjct: 1  agccaaggatgacttgccga 20



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ttggcaagttgttcttggct 109
           ||||||||||||||||||||
Sbjct: 74  ttggcaagttgttcttggct 93




>45589_miR169:micropc
          Length = 81

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  agccaaggatgacttgccgactct 24
          |||||||||||||||||| |||||
Sbjct: 1  agccaaggatgacttgcctactct 24




>45529_miR169:micropc
          Length = 83

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  agccaaggatgacttgccgactct 24
          |||||||||||||||||| |||||
Sbjct: 2  agccaaggatgacttgcctactct 25




>45254_miR169:micropc
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  agccaaggatgacttgccga 20
          ||||||||||||||||||||
Sbjct: 1  agccaaggatgacttgccga 20



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ttggcaagttgttcttggct 109
           ||||||||||||||||||||
Sbjct: 74  ttggcaagttgttcttggct 93




>45101_miR169:micropc
          Length = 93

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  agccaaggatgacttgccga 20
          ||||||||||||||||||||
Sbjct: 1  agccaaggatgacttgccga 20



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  ttggcaagttgttcttggct 109
           ||||||||||||||||||||
Sbjct: 74  ttggcaagttgttcttggct 93




>44839_miR169:micropc
          Length = 83

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  agccaaggatgacttgccgactct 24
          |||||||||||||||||| |||||
Sbjct: 2  agccaaggatgacttgcctactct 25