miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46717_miR168:micropc
Length = 96
Score = 190 bits (96), Expect = 1e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgccgccgccggctgagcggagacggttgcgtcgtcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgccgccgccggctgagcggagacggttgcgtcgtcgt 60
Query: 61 ctccggcgaatttagctcccgccttgcatcaactga 96
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctccggcgaatttagctcccgccttgcatcaactga 96
>46098_miR168:micropc
Length = 101
Score = 121 bits (61), Expect = 1e-28
Identities = 91/101 (90%), Gaps = 5/101 (4%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgccgccgc-----cggctgagcggagacggttgcgtc 55
||||||||||||||||||||||| |||||| |||||||||| |||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactatcgccgcgccggcggctgagcgagcacggttgcgtc 60
Query: 56 gtcgtctccggcgaatttagctcccgccttgcatcaactga 96
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcgtctccggcgaatttagctcccgccttgcatcaactga 101
>45758_miR168:micropc
Length = 101
Score = 121 bits (61), Expect = 1e-28
Identities = 91/101 (90%), Gaps = 5/101 (4%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgccgccgc-----cggctgagcggagacggttgcgtc 55
||||||||||||||||||||||| |||||| |||||||||| |||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactatcgccgcgccggcggctgagcgagcacggttgcgtc 60
Query: 56 gtcgtctccggcgaatttagctcccgccttgcatcaactga 96
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcgtctccggcgaatttagctcccgccttgcatcaactga 101
>46636_miR168:micropc
Length = 141
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 122 tcccgccttgcatcaactga 141
>46343_miR168:micropc
Length = 144
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 125 tcccgccttgcatcaactga 144
>46333_miR168:micropc
Length = 118
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 99 tcccgccttgcatcaactga 118
>46278_miR168:micropc
Length = 138
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 119 tcccgccttgcatcaactga 138
>45952_miR168:micropc
Length = 155
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 136 tcccgccttgcatcaactga 155
>45700_miR168:micropc
Length = 155
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 136 tcccgccttgcatcaactga 155
>45425_miR168:micropc
Length = 141
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 122 tcccgccttgcatcaactga 141
>45406_miR168:micropc
Length = 118
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 99 tcccgccttgcatcaactga 118
>45119_miR168:micropc
Length = 144
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 125 tcccgccttgcatcaactga 144
>45088_miR168:micropc
Length = 118
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 99 tcccgccttgcatcaactga 118
>44989_miR168:micropc
Length = 138
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 119 tcccgccttgcatcaactga 138
>44951_miR168:micropc
Length = 118
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactg 24
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 99 tcccgccttgcatcaactga 118
>46666_miR168:micropc
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgcc 26
|||||||||||||||||||| |||||
Sbjct: 1 tcgcttggtgcaggtcgggacctgcc 26
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 106 tcccgccttgcatcaactga 125
>46663_miR168:micropc
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 69 tcccgccttgcatcaactga 88
>46522_miR168:micropc
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 91 tcccgccttgcatcaactga 110
>46512_miR168:micropc
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 69 tcccgccttgcatcaactga 88
>46427_miR168:micropc
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 69 tcccgccttgcatcaactga 88
>46406_miR168:micropc
Length = 110
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 91 tcccgccttgcatcaactga 110
>46189_miR168:micropc
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 69 tcccgccttgcatcaactga 88
>46064_miR168:micropc
Length = 67
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgccgccg 30
||||||||||||| |||||| |||||||||
Sbjct: 1 tcgcttggtgcagatcgggacctgccgccg 30
>46038_miR168:micropc
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 85 tcccgccttgcatcaactga 104
>46016_miR168:micropc
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgcc 26
|||||||||||||||||||| |||||
Sbjct: 1 tcgcttggtgcaggtcgggacctgcc 26
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 106 tcccgccttgcatcaactga 125
>45301_miR168:micropc
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 85 tcccgccttgcatcaactga 104
>45228_miR168:micropc
Length = 141
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 122 tcccgccttgcatcaactga 141
>44967_miR168:micropc
Length = 141
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaac 22
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 122 tcccgccttgcatcaactga 141
>44880_miR168:micropc
Length = 67
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcgggaactgccgccg 30
||||||||||||| |||||| |||||||||
Sbjct: 1 tcgcttggtgcagatcgggacctgccgccg 30
>46411_miR168:micropc
Length = 145
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>46209_miR168:micropc
Length = 133
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 114 tcccgccttgcatcaactga 133
>45956_miR168:micropc
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 81 tcccgccttgcatcaactga 100
>45664_miR168:micropc
Length = 133
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 114 tcccgccttgcatcaactga 133
>45247_miR168:micropc
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 115 tcccgccttgcatcaactga 134
>45240_miR168:micropc
Length = 145
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>44885_miR168:micropc
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 115 tcccgccttgcatcaactga 134
>44865_miR168:micropc
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tcgcttggtgcaggtcggga 20
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tcccgccttgcatcaactga 96
||||||||||||||||||||
Sbjct: 81 tcccgccttgcatcaactga 100
