miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45222_miR399:micropc
Length = 102
Score = 202 bits (102), Expect = 4e-53
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 1 agggcttctctactttggcaacacatgtcaatgatgacgacgacggagaagtcgaacgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agggcttctctactttggcaacacatgtcaatgatgacgacgacggagaagtcgaacgga 60
Query: 61 tgccgtccagtcatcgacgacttgccaaaggagagttgccct 102
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgccgtccagtcatcgacgacttgccaaaggagagttgccct 102
>46063_miR399:micropc
Length = 100
Score = 198 bits (100), Expect = 5e-52
Identities = 100/100 (100%)
Strand = Plus / Plus
Query: 2 gggcttctctactttggcaacacatgtcaatgatgacgacgacggagaagtcgaacggat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggcttctctactttggcaacacatgtcaatgatgacgacgacggagaagtcgaacggat 60
Query: 62 gccgtccagtcatcgacgacttgccaaaggagagttgccc 101
||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccgtccagtcatcgacgacttgccaaaggagagttgccc 100
>46805_miR399:micropc
Length = 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 cttgccaaaggagagttgccct 102
||||||||||||||||||||||
Sbjct: 52 cttgccaaaggagagttgccct 73
>46622_miR399:micropc
Length = 72
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 cttgccaaaggagagttgccct 102
||||||||||||||||||||||
Sbjct: 51 cttgccaaaggagagttgccct 72
>46373_miR399:micropc
Length = 74
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 cttgccaaaggagagttgccct 102
||||||||||||||||||||||
Sbjct: 52 cttgccaaaggagagttgccct 73
>45691_miR399:micropc
Length = 71
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 cttgccaaaggagagttgccct 102
||||||||||||||||||||||
Sbjct: 50 cttgccaaaggagagttgccct 71
>45227_miR399:micropc
Length = 73
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 cttgccaaaggagagttgccct 102
||||||||||||||||||||||
Sbjct: 51 cttgccaaaggagagttgccct 72
>44886_miR399:micropc
Length = 73
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 cttgccaaaggagagttgccct 102
||||||||||||||||||||||
Sbjct: 51 cttgccaaaggagagttgccct 72
>46680_miR399:micropc
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 ttgccaaaggagagttgccct 102
|||||||||||||||||||||
Sbjct: 76 ttgccaaaggagagttgccct 96
>46506_miR399:micropc
Length = 108
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 ttgccaaaggagagttgccct 102
|||||||||||||||||||||
Sbjct: 87 ttgccaaaggagagttgccct 107
>46147_miR399:micropc
Length = 70
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 cttgccaaaggagagttgccc 101
|||||||||||||||||||||
Sbjct: 50 cttgccaaaggagagttgccc 70
>46005_miR399:micropc
Length = 69
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 cttgccaaaggagagttgccc 101
|||||||||||||||||||||
Sbjct: 49 cttgccaaaggagagttgccc 69
>45985_miR399:micropc
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 ttgccaaaggagagttgccct 102
|||||||||||||||||||||
Sbjct: 76 ttgccaaaggagagttgccct 96
>44965_miR399:micropc
Length = 108
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 ttgccaaaggagagttgccct 102
|||||||||||||||||||||
Sbjct: 87 ttgccaaaggagagttgccct 107
>46374_miR399:micropc
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 83 tgccaaaggagagttgccct 102
||||||||||||||||||||
Sbjct: 68 tgccaaaggagagttgccct 87
>46085_miR399:micropc
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 ttgccaaaggagagttgccc 101
||||||||||||||||||||
Sbjct: 85 ttgccaaaggagagttgccc 104
>45225_miR399:micropc
Length = 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 ttgccaaaggagagttgccc 101
||||||||||||||||||||
Sbjct: 85 ttgccaaaggagagttgccc 104
>45043_miR399:micropc
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 83 tgccaaaggagagttgccct 102
||||||||||||||||||||
Sbjct: 68 tgccaaaggagagttgccct 87
>44788_miR399:micropc
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 ttgccaaaggagagttgccc 101
||||||||||||||||||||
Sbjct: 75 ttgccaaaggagagttgccc 94
