miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46579_miR166:micropc
Length = 78
Score = 137 bits (69), Expect = 1e-33
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 1 ggggaatgacnccgggtccnaaagagagacnctcgcatggcgtgcgcgtggtgcgtttcg 60
|||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 ggggaatgacgccgggtccgaaagagagacgctcgcatggcgtgcgcgtggtgcgtttcg 60
Query: 61 gaccaggcttcattcccc 78
||||||||||||||||||
Sbjct: 61 gaccaggcttcattcccc 78
>46389_miR166:micropc
Length = 78
Score = 137 bits (69), Expect = 1e-33
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 1 ggggaatgacnccgggtccnaaagagagacnctcgcatggcgtgcgcgtggtgcgtttcg 60
|||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 ggggaatgacgccgggtccgaaagagagacgctcgcatggcgtgcgcgtggtgcgtttcg 60
Query: 61 gaccaggcttcattcccc 78
||||||||||||||||||
Sbjct: 61 gaccaggcttcattcccc 78
>45042_miR166:micropc
Length = 78
Score = 137 bits (69), Expect = 1e-33
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 1 ggggaatgacnccgggtccnaaagagagacnctcgcatggcgtgcgcgtggtgcgtttcg 60
|||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 ggggaatgacgccgggtccgaaagagagacgctcgcatggcgtgcgcgtggtgcgtttcg 60
Query: 61 gaccaggcttcattcccc 78
||||||||||||||||||
Sbjct: 61 gaccaggcttcattcccc 78
>46646_miR166:micropc
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 gtttcggaccaggcttcattccc 77
|||||||||||||||||||||||
Sbjct: 78 gtttcggaccaggcttcattccc 100
>46396_miR166:micropc
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 gtttcggaccaggcttcattccc 77
|||||||||||||||||||||||
Sbjct: 78 gtttcggaccaggcttcattccc 100
>45478_miR166:micropc
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 gtttcggaccaggcttcattccc 77
|||||||||||||||||||||||
Sbjct: 78 gtttcggaccaggcttcattccc 100
>46809_miR166:micropc
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 ttcggaccaggcttcattcccc 78
||||||||||||||||||||||
Sbjct: 66 ttcggaccaggcttcattcccc 87
>46722_miR166:micropc
Length = 98
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 ttcggaccaggcttcattcccc 78
||||||||||||||||||||||
Sbjct: 76 ttcggaccaggcttcattcccc 97
>45909_miR166:micropc
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 ttcggaccaggcttcattcccc 78
||||||||||||||||||||||
Sbjct: 66 ttcggaccaggcttcattcccc 87
>45480_miR166:micropc
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 ttcggaccaggcttcattcccc 78
||||||||||||||||||||||
Sbjct: 66 ttcggaccaggcttcattcccc 87
>45364_miR166:micropc
Length = 86
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 ttcggaccaggcttcattcccc 78
||||||||||||||||||||||
Sbjct: 65 ttcggaccaggcttcattcccc 86
>45050_miR166:micropc
Length = 86
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 ttcggaccaggcttcattcccc 78
||||||||||||||||||||||
Sbjct: 65 ttcggaccaggcttcattcccc 86
>44998_miR166:micropc
Length = 86
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 ttcggaccaggcttcattcccc 78
||||||||||||||||||||||
Sbjct: 65 ttcggaccaggcttcattcccc 86
>46788_miR166:micropc
Length = 164
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 144 tcggaccaggcttcattcccc 164
>46747_miR166:micropc
Length = 114
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 94 tcggaccaggcttcattcccc 114
>46726_miR166:micropc
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 ttcggaccaggcttcattccc 77
|||||||||||||||||||||
Sbjct: 64 ttcggaccaggcttcattccc 84
>46517_miR166:micropc
Length = 75
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 55 tcggaccaggcttcattcccc 75
>46502_miR166:micropc
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccc 96
>46431_miR166:micropc
Length = 153
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 133 tcggaccaggcttcattcccc 153
>46338_miR166:micropc
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 ttcggaccaggcttcattccc 77
|||||||||||||||||||||
Sbjct: 64 ttcggaccaggcttcattccc 84
>46216_miR166:micropc
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 ttcggaccaggcttcattccc 77
|||||||||||||||||||||
Sbjct: 64 ttcggaccaggcttcattccc 84
>46070_miR166:micropc
Length = 142
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 122 tcggaccaggcttcattcccc 142
>46012_miR166:micropc
Length = 116
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 95 tcggaccaggcttcattcccc 115
>46000_miR166:micropc
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 ttcggaccaggcttcattccc 77
|||||||||||||||||||||
Sbjct: 64 ttcggaccaggcttcattccc 84
>45842_miR166:micropc
Length = 96
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccc 96
>45509_miR166:micropc
Length = 199
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 179 tcggaccaggcttcattcccc 199
>45504_miR166:micropc
Length = 170
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 150 tcggaccaggcttcattcccc 170
>45424_miR166:micropc
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 ttcggaccaggcttcattccc 77
|||||||||||||||||||||
Sbjct: 64 ttcggaccaggcttcattccc 84
>45417_miR166:micropc
Length = 95
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccc 94
>45093_miR166:micropc
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 ttcggaccaggcttcattccc 77
|||||||||||||||||||||
Sbjct: 64 ttcggaccaggcttcattccc 84
>45034_miR166:micropc
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattcccc 97
>45033_miR166:micropc
Length = 170
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 150 tcggaccaggcttcattcccc 170
>45032_miR166:micropc
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattcccc 97
>44949_miR166:micropc
Length = 114
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 94 tcggaccaggcttcattcccc 114
>44922_miR166:micropc
Length = 78
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 58 tcggaccaggcttcattcccc 78
>44918_miR166:micropc
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 ttcggaccaggcttcattccc 77
|||||||||||||||||||||
Sbjct: 64 ttcggaccaggcttcattccc 84
>44898_miR166:micropc
Length = 116
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tcggaccaggcttcattcccc 78
|||||||||||||||||||||
Sbjct: 95 tcggaccaggcttcattcccc 115
