miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>44978_miR1130:micropc
          Length = 144

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                              
Query: 16 cctccgtttcataatataagactttctagcattgcccatatgtatatatatg 67
          ||||||||||||||| |||||||||||||||||| ||| || ||||||||||
Sbjct: 1  cctccgtttcataatgtaagactttctagcattgtccacatttatatatatg 52



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 93  atatatgaatgtgggtaatgctataacgtcttacattataaaacggagg 141
           |||||| |||||||  ||||||| || |||||||||||| |||||||||
Sbjct: 49  atatataaatgtggacaatgctagaaagtcttacattatgaaacggagg 1



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 16  cctccgtttcataatataagactttctagcatt 48
           |||| |||||||||| |||||||||||||||||
Sbjct: 144 cctctgtttcataatgtaagactttctagcatt 112



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 61  atatatgtctagattcattaacatctatatgaata 95
           |||||||| |||||| ||| |||||||||||||||
Sbjct: 72  atatatgtttagatttattgacatctatatgaata 106



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 106 ggtaatgctataacgtcttacattataaaacggagg 141
           |||||||||| || |||||||||||| |||| ||||
Sbjct: 109 ggtaatgctagaaagtcttacattatgaaacagagg 144




>46437_miR1436:micropc
          Length = 108

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                     
Query: 12  actccctccgtttcataatataagactttctagcattgccca 53
           ||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 108 actccctccgtttcataatgtaagattttctagcattgccca 67



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 94  tatatgaatgtgggtaatgctataacgtcttacattataaaacggagg 141
           |||||| ||||||| ||||||| ||  ||||||||||| |||||||||
Sbjct: 57  tatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagg 104



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 22 tttcataatataagactttctagcattgcccatat 56
          ||||| ||| ||||||||||||||||||| |||||
Sbjct: 11 tttcacaatgtaagactttctagcattgctcatat 45




>46464_miR1132:micropc
          Length = 149

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
          ||||||||| ||||||||||||| ||||||||||||||
Sbjct: 77 atatatatgcctagattcattaatatctatatgaatat 40



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 13  ctccctccgtttcataatataagactttctagcattgcccatatgtatata 63
           |||||||||||||||||| || || ||||||||| | ||||||| ||||||
Sbjct: 149 ctccctccgtttcataatgtaggattttctagcactacccatatttatata 99



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                  
Query: 17 ctccgtttcataatataagactttctagcattgcccatat 56
          |||||||||| ||| ||| ||||||||||||||| |||||
Sbjct: 4  ctccgtttcacaatgtaatactttctagcattgcacatat 43



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 58  tatatatatgtctagattcattaacatctatatgaatat 96
           ||||||| ||| ||||||||||||| ||||||| |||||
Sbjct: 71  tatatatgtgtttagattcattaacttctatataaatat 109




>45514_miR1132:micropc
          Length = 149

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
          ||||||||| ||||||||||||| ||||||||||||||
Sbjct: 77 atatatatgcctagattcattaatatctatatgaatat 40



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 13  ctccctccgtttcataatataagactttctagcattgcccatatgtatata 63
           |||||||||||||||||| || || ||||||||| | ||||||| ||||||
Sbjct: 149 ctccctccgtttcataatgtaggattttctagcactacccatatttatata 99



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                  
Query: 17 ctccgtttcataatataagactttctagcattgcccatat 56
          |||||||||| ||| ||| ||||||||||||||| |||||
Sbjct: 4  ctccgtttcacaatgtaatactttctagcattgcacatat 43



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 58  tatatatatgtctagattcattaacatctatatgaatat 96
           ||||||| ||| ||||||||||||| ||||||| |||||
Sbjct: 71  tatatatgtgtttagattcattaacttctatataaatat 109




>45099_miR1132:micropc
          Length = 149

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
          ||||||||| ||||||||||||| ||||||||||||||
Sbjct: 77 atatatatgcctagattcattaatatctatatgaatat 40



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 13  ctccctccgtttcataatataagactttctagcattgcccatatgtatata 63
           |||||||||||||||||| || || ||||||||| | ||||||| ||||||
Sbjct: 149 ctccctccgtttcataatgtaggattttctagcactacccatatttatata 99



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                  
Query: 17 ctccgtttcataatataagactttctagcattgcccatat 56
          |||||||||| ||| ||| ||||||||||||||| |||||
Sbjct: 4  ctccgtttcacaatgtaatactttctagcattgcacatat 43



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 58  tatatatatgtctagattcattaacatctatatgaatat 96
           ||||||| ||| ||||||||||||| ||||||| |||||
Sbjct: 71  tatatatgtgtttagattcattaacttctatataaatat 109




>45687_miR819:micropc
          Length = 84

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                       
Query: 24 tcataatataagactttctagcattgcccatatgtatatatatgt 68
          ||||| |||||||||||||||||||||||| ||  ||||||||||
Sbjct: 84 tcatattataagactttctagcattgcccacattcatatatatgt 40



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 93  atatatgaatgtgggtaatgctataacgtctta 125
           ||||||||||||||| ||||||| || ||||||
Sbjct: 44  atatatgaatgtgggcaatgctagaaagtctta 76




>45260_miR819:micropc
          Length = 116

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                              
Query: 61 atatatgtctagattcattaacatctatatgaatat 96
          |||||||| ||||||||||||||| |||||||||||
Sbjct: 60 atatatgtttagattcattaacatatatatgaatat 25



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
          |||||| |||||| |||||||||||||||||| |||||
Sbjct: 55 atatatgtgtctatattcattaacatctatataaatat 92



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                 
Query: 30 tataagactttctagcattgcccatatgtatatatatgt 68
          |||||||||||||||||||  ||||||  ||||||||||
Sbjct: 2  tataagactttctagcattatccatattcatatatatgt 40




>45215_miR1120:micropc
          Length = 142

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 17  ctccgtttcataatataagactttctagcattgcccatat 56
           |||||||||||||||||||| |||||| |||||| |||||
Sbjct: 142 ctccgtttcataatataagaatttctaacattgctcatat 103



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                               
Query: 17 ctccgtttcataatataagactttctagcattgccca 53
          |||||||| ||||| ||| ||||||||||||||||||
Sbjct: 1  ctccgttttataatgtaaaactttctagcattgccca 37



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 97  atgaatgtgggtaatgctataacgtcttacattataaaacggag 140
           ||||| ||||| ||||||| || || ||||||||||||||||||
Sbjct: 44  atgaacgtgggcaatgctagaaagttttacattataaaacggag 1



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 73  attcattaacatctatatgaatat 96
           ||||||||||||||||||| ||||
Sbjct: 83  attcattaacatctatatgtatat 106




>45075_miR819:micropc
          Length = 116

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                              
Query: 61 atatatgtctagattcattaacatctatatgaatat 96
          |||||||| ||||||||||||||| |||||||||||
Sbjct: 60 atatatgtttagattcattaacatatatatgaatat 25



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
          |||||| |||||| |||||||||||||||||| |||||
Sbjct: 55 atatatgtgtctatattcattaacatctatataaatat 92



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                 
Query: 30 tataagactttctagcattgcccatatgtatatatatgt 68
          |||||||||||||||||||  ||||||  ||||||||||
Sbjct: 2  tataagactttctagcattatccatattcatatatatgt 40



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 34/39 (87%)
 Strand = Plus / Minus

                                                  
Query: 30  tataagactttctagcattgcccatatgtatatatatgt 68
           ||||||||||||||| || | |||||| |||||| ||||
Sbjct: 115 tataagactttctagtatngtccatatttatatagatgt 77




>46637_miR446:micropc
          Length = 80

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                             
Query: 59 atatatatgtctagattcattaacatctatatgaa 93
          ||||||||||||||||||||||||||  |||||||
Sbjct: 42 atatatatgtctagattcattaacattaatatgaa 8



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 69 ctagattcattaacatctatatgaatat 96
          ||||||||||||||||| ||||||||||
Sbjct: 47 ctagattcattaacatcaatatgaatat 74




>46318_miR446:micropc
          Length = 86

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 59 atatatatgtctagattcattaacatctatatgaatata 97
          ||||||||||||||||| |||||| || |||||||||||
Sbjct: 41 atatatatgtctagatttattaacgtcaatatgaatata 79




>44937_miR819:micropc
          Length = 94

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                     
Query: 24 tcataatataagactttctagcattgcccatatgtatatatat 66
          ||||| ||||||||||||||  ||||||||||| |||||||||
Sbjct: 94 tcatattataagactttctattattgcccatatttatatatat 52




>46758_miR808:micropc
          Length = 98

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
          |||||||||||||||||| ||| |||| ||||||||||
Sbjct: 52 atatatatgtctagattcgttagcatcaatatgaatat 15



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 68 tctagattcattaacatctatatgaatat 96
          |||||||||||||||||  ||||||||||
Sbjct: 56 tctagattcattaacattaatatgaatat 84




>46670_miR809:micropc
          Length = 97

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 61 atatatgtctagattcattaacatctatatgaat 94
          ||||||||||| |||||||||||| |||||||||
Sbjct: 48 atatatgtctacattcattaacatatatatgaat 81



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                          
Query: 66 tgtctagattcattaacatctatatgaatata 97
          |||||||||| |||||||||||| ||||||||
Sbjct: 44 tgtctagatttattaacatctat-tgaatata 14



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 93  atatatgaatgtgggtaatg 112
           ||||||||||||||||||||
Sbjct: 72  atatatgaatgtgggtaatg 91




>46060_miR809:micropc
          Length = 87

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                        
Query: 67 gtctagattcattaacatctatatgaatat 96
          ||||||||||||||||||| ||||||||||
Sbjct: 45 gtctagattcattaacatcaatatgaatat 16




>45731_miR446:micropc
          Length = 86

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                            
Query: 61 atatatgtctagattcattaacatctatatgaat 94
          |||||||| |||||||||||| ||||||||||||
Sbjct: 44 atatatgtttagattcattaaaatctatatgaat 11



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 66 tgtctagattcattaacatctatatgaat 94
          |||||||||||||||||||| ||||||||
Sbjct: 48 tgtctagattcattaacatcaatatgaat 76




>45342_miR809:micropc
          Length = 100

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
          |||||||||||||||||| ||| |||| ||||||||||
Sbjct: 53 atatatatgtctagattcgttagcatcaatatgaatat 16



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 68 tctagattcattaacatctatatgaatat 96
          |||||||||||||||||  ||||||||||
Sbjct: 57 tctagattcattaacattaatatgaatat 85




>44980_miR808:micropc
          Length = 97

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 61 atatatgtctagattcattaacatctatatgaat 94
          ||||||||||| |||||||||||| |||||||||
Sbjct: 48 atatatgtctacattcattaacatatatatgaat 81



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                          
Query: 66 tgtctagattcattaacatctatatgaatata 97
          |||||||||| |||||||||||| ||||||||
Sbjct: 44 tgtctagatttattaacatctat-tgaatata 14



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 93  atatatgaatgtgggtaatg 112
           ||||||||||||||||||||
Sbjct: 72  atatatgaatgtgggtaatg 91




>46801_miR809:micropc
          Length = 110

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 49/56 (87%), Gaps = 2/56 (3%)
 Strand = Plus / Plus

                                                                   
Query: 59  atatatatgtctagattcattaacatctatatgaat--atatgaatgtgggtaatg 112
           |||||||||| |||||||||||||||| |||| |||  |||| |||||||| ||||
Sbjct: 48  atatatatgtttagattcattaacatcaatataaatcaatataaatgtgggaaatg 103



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                               
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
          ||||||| | |||||||||||||||||  ||||||||
Sbjct: 54 tatatatctatctagattcattaacattaatatgaat 18