miRNEST 2.0, an integrative microRNA resource :: BLAST
>44978_miR1130:micropc
Length = 144
Score = 71.9 bits (36), Expect = 1e-13
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 16 cctccgtttcataatataagactttctagcattgcccatatgtatatatatg 67
||||||||||||||| |||||||||||||||||| ||| || ||||||||||
Sbjct: 1 cctccgtttcataatgtaagactttctagcattgtccacatttatatatatg 52
Score = 50.1 bits (25), Expect = 5e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 93 atatatgaatgtgggtaatgctataacgtcttacattataaaacggagg 141
|||||| ||||||| ||||||| || |||||||||||| |||||||||
Sbjct: 49 atatataaatgtggacaatgctagaaagtcttacattatgaaacggagg 1
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 16 cctccgtttcataatataagactttctagcatt 48
|||| |||||||||| |||||||||||||||||
Sbjct: 144 cctctgtttcataatgtaagactttctagcatt 112
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 61 atatatgtctagattcattaacatctatatgaata 95
|||||||| |||||| ||| |||||||||||||||
Sbjct: 72 atatatgtttagatttattgacatctatatgaata 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 106 ggtaatgctataacgtcttacattataaaacggagg 141
|||||||||| || |||||||||||| |||| ||||
Sbjct: 109 ggtaatgctagaaagtcttacattatgaaacagagg 144
>46437_miR1436:micropc
Length = 108
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 12 actccctccgtttcataatataagactttctagcattgccca 53
||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 108 actccctccgtttcataatgtaagattttctagcattgccca 67
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 94 tatatgaatgtgggtaatgctataacgtcttacattataaaacggagg 141
|||||| ||||||| ||||||| || ||||||||||| |||||||||
Sbjct: 57 tatatgtatgtgggcaatgctagaaaatcttacattatgaaacggagg 104
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 22 tttcataatataagactttctagcattgcccatat 56
||||| ||| ||||||||||||||||||| |||||
Sbjct: 11 tttcacaatgtaagactttctagcattgctcatat 45
>46464_miR1132:micropc
Length = 149
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
||||||||| ||||||||||||| ||||||||||||||
Sbjct: 77 atatatatgcctagattcattaatatctatatgaatat 40
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 13 ctccctccgtttcataatataagactttctagcattgcccatatgtatata 63
|||||||||||||||||| || || ||||||||| | ||||||| ||||||
Sbjct: 149 ctccctccgtttcataatgtaggattttctagcactacccatatttatata 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 17 ctccgtttcataatataagactttctagcattgcccatat 56
|||||||||| ||| ||| ||||||||||||||| |||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatat 43
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 58 tatatatatgtctagattcattaacatctatatgaatat 96
||||||| ||| ||||||||||||| ||||||| |||||
Sbjct: 71 tatatatgtgtttagattcattaacttctatataaatat 109
>45514_miR1132:micropc
Length = 149
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
||||||||| ||||||||||||| ||||||||||||||
Sbjct: 77 atatatatgcctagattcattaatatctatatgaatat 40
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 13 ctccctccgtttcataatataagactttctagcattgcccatatgtatata 63
|||||||||||||||||| || || ||||||||| | ||||||| ||||||
Sbjct: 149 ctccctccgtttcataatgtaggattttctagcactacccatatttatata 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 17 ctccgtttcataatataagactttctagcattgcccatat 56
|||||||||| ||| ||| ||||||||||||||| |||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatat 43
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 58 tatatatatgtctagattcattaacatctatatgaatat 96
||||||| ||| ||||||||||||| ||||||| |||||
Sbjct: 71 tatatatgtgtttagattcattaacttctatataaatat 109
>45099_miR1132:micropc
Length = 149
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
||||||||| ||||||||||||| ||||||||||||||
Sbjct: 77 atatatatgcctagattcattaatatctatatgaatat 40
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 13 ctccctccgtttcataatataagactttctagcattgcccatatgtatata 63
|||||||||||||||||| || || ||||||||| | ||||||| ||||||
Sbjct: 149 ctccctccgtttcataatgtaggattttctagcactacccatatttatata 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 17 ctccgtttcataatataagactttctagcattgcccatat 56
|||||||||| ||| ||| ||||||||||||||| |||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatat 43
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 58 tatatatatgtctagattcattaacatctatatgaatat 96
||||||| ||| ||||||||||||| ||||||| |||||
Sbjct: 71 tatatatgtgtttagattcattaacttctatataaatat 109
>45687_miR819:micropc
Length = 84
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 24 tcataatataagactttctagcattgcccatatgtatatatatgt 68
||||| |||||||||||||||||||||||| || ||||||||||
Sbjct: 84 tcatattataagactttctagcattgcccacattcatatatatgt 40
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 93 atatatgaatgtgggtaatgctataacgtctta 125
||||||||||||||| ||||||| || ||||||
Sbjct: 44 atatatgaatgtgggcaatgctagaaagtctta 76
>45260_miR819:micropc
Length = 116
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 61 atatatgtctagattcattaacatctatatgaatat 96
|||||||| ||||||||||||||| |||||||||||
Sbjct: 60 atatatgtttagattcattaacatatatatgaatat 25
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
|||||| |||||| |||||||||||||||||| |||||
Sbjct: 55 atatatgtgtctatattcattaacatctatataaatat 92
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 30 tataagactttctagcattgcccatatgtatatatatgt 68
||||||||||||||||||| |||||| ||||||||||
Sbjct: 2 tataagactttctagcattatccatattcatatatatgt 40
>45215_miR1120:micropc
Length = 142
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 17 ctccgtttcataatataagactttctagcattgcccatat 56
|||||||||||||||||||| |||||| |||||| |||||
Sbjct: 142 ctccgtttcataatataagaatttctaacattgctcatat 103
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 17 ctccgtttcataatataagactttctagcattgccca 53
|||||||| ||||| ||| ||||||||||||||||||
Sbjct: 1 ctccgttttataatgtaaaactttctagcattgccca 37
Score = 48.1 bits (24), Expect = 2e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 97 atgaatgtgggtaatgctataacgtcttacattataaaacggag 140
||||| ||||| ||||||| || || ||||||||||||||||||
Sbjct: 44 atgaacgtgggcaatgctagaaagttttacattataaaacggag 1
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 73 attcattaacatctatatgaatat 96
||||||||||||||||||| ||||
Sbjct: 83 attcattaacatctatatgtatat 106
>45075_miR819:micropc
Length = 116
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 61 atatatgtctagattcattaacatctatatgaatat 96
|||||||| ||||||||||||||| |||||||||||
Sbjct: 60 atatatgtttagattcattaacatatatatgaatat 25
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
|||||| |||||| |||||||||||||||||| |||||
Sbjct: 55 atatatgtgtctatattcattaacatctatataaatat 92
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 30 tataagactttctagcattgcccatatgtatatatatgt 68
||||||||||||||||||| |||||| ||||||||||
Sbjct: 2 tataagactttctagcattatccatattcatatatatgt 40
Score = 40.1 bits (20), Expect = 5e-04
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 30 tataagactttctagcattgcccatatgtatatatatgt 68
||||||||||||||| || | |||||| |||||| ||||
Sbjct: 115 tataagactttctagtatngtccatatttatatagatgt 77
>46637_miR446:micropc
Length = 80
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaa 93
|||||||||||||||||||||||||| |||||||
Sbjct: 42 atatatatgtctagattcattaacattaatatgaa 8
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 69 ctagattcattaacatctatatgaatat 96
||||||||||||||||| ||||||||||
Sbjct: 47 ctagattcattaacatcaatatgaatat 74
>46318_miR446:micropc
Length = 86
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaatata 97
||||||||||||||||| |||||| || |||||||||||
Sbjct: 41 atatatatgtctagatttattaacgtcaatatgaatata 79
>44937_miR819:micropc
Length = 94
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 24 tcataatataagactttctagcattgcccatatgtatatatat 66
||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 94 tcatattataagactttctattattgcccatatttatatatat 52
>46758_miR808:micropc
Length = 98
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
|||||||||||||||||| ||| |||| ||||||||||
Sbjct: 52 atatatatgtctagattcgttagcatcaatatgaatat 15
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 68 tctagattcattaacatctatatgaatat 96
||||||||||||||||| ||||||||||
Sbjct: 56 tctagattcattaacattaatatgaatat 84
>46670_miR809:micropc
Length = 97
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
||||||||||| |||||||||||| |||||||||
Sbjct: 48 atatatgtctacattcattaacatatatatgaat 81
Score = 40.1 bits (20), Expect = 5e-04
Identities = 30/32 (93%), Gaps = 1/32 (3%)
Strand = Plus / Minus
Query: 66 tgtctagattcattaacatctatatgaatata 97
|||||||||| |||||||||||| ||||||||
Sbjct: 44 tgtctagatttattaacatctat-tgaatata 14
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 93 atatatgaatgtgggtaatg 112
||||||||||||||||||||
Sbjct: 72 atatatgaatgtgggtaatg 91
>46060_miR809:micropc
Length = 87
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 67 gtctagattcattaacatctatatgaatat 96
||||||||||||||||||| ||||||||||
Sbjct: 45 gtctagattcattaacatcaatatgaatat 16
>45731_miR446:micropc
Length = 86
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
|||||||| |||||||||||| ||||||||||||
Sbjct: 44 atatatgtttagattcattaaaatctatatgaat 11
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 66 tgtctagattcattaacatctatatgaat 94
|||||||||||||||||||| ||||||||
Sbjct: 48 tgtctagattcattaacatcaatatgaat 76
>45342_miR809:micropc
Length = 100
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 59 atatatatgtctagattcattaacatctatatgaatat 96
|||||||||||||||||| ||| |||| ||||||||||
Sbjct: 53 atatatatgtctagattcgttagcatcaatatgaatat 16
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 68 tctagattcattaacatctatatgaatat 96
||||||||||||||||| ||||||||||
Sbjct: 57 tctagattcattaacattaatatgaatat 85
>44980_miR808:micropc
Length = 97
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 61 atatatgtctagattcattaacatctatatgaat 94
||||||||||| |||||||||||| |||||||||
Sbjct: 48 atatatgtctacattcattaacatatatatgaat 81
Score = 40.1 bits (20), Expect = 5e-04
Identities = 30/32 (93%), Gaps = 1/32 (3%)
Strand = Plus / Minus
Query: 66 tgtctagattcattaacatctatatgaatata 97
|||||||||| |||||||||||| ||||||||
Sbjct: 44 tgtctagatttattaacatctat-tgaatata 14
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 93 atatatgaatgtgggtaatg 112
||||||||||||||||||||
Sbjct: 72 atatatgaatgtgggtaatg 91
>46801_miR809:micropc
Length = 110
Score = 50.1 bits (25), Expect = 5e-07
Identities = 49/56 (87%), Gaps = 2/56 (3%)
Strand = Plus / Plus
Query: 59 atatatatgtctagattcattaacatctatatgaat--atatgaatgtgggtaatg 112
|||||||||| |||||||||||||||| |||| ||| |||| |||||||| ||||
Sbjct: 48 atatatatgtttagattcattaacatcaatataaatcaatataaatgtgggaaatg 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 58 tatatatatgtctagattcattaacatctatatgaat 94
||||||| | ||||||||||||||||| ||||||||
Sbjct: 54 tatatatctatctagattcattaacattaatatgaat 18