miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>45012_miR437:micropc
          Length = 149

 Score =  295 bits (149), Expect = 5e-81
 Identities = 149/149 (100%)
 Strand = Plus / Plus

                                                                       
Query: 11  aagtcaaacttcctaactttgactaagttcatataaatctgcactaatatctgcaacatc 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aagtcaaacttcctaactttgactaagttcatataaatctgcactaatatctgcaacatc 60

                                                                       
Query: 71  aaattaatttcactaaatctaccatgaggtattgtatatattaatacattttttctcgaa 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaattaatttcactaaatctaccatgaggtattgtatatattaatacattttttctcgaa 120

                                        
Query: 131 acttgatctaagttagagaagtttgactt 159
           |||||||||||||||||||||||||||||
Sbjct: 121 acttgatctaagttagagaagtttgactt 149




>46270_miR437:micropc
          Length = 175

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 112 taatacattttttctcgaaacttgatctaagttagagaagtttgactt 159
           ||||| |||||||||  |||||||||| ||||||||||||||||||||
Sbjct: 128 taatatattttttctaaaaacttgatcaaagttagagaagtttgactt 175




>46472_miR437:micropc
          Length = 180

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 140 aagttagagaagtttgactt 159
           ||||||||||||||||||||
Sbjct: 161 aagttagagaagtttgactt 180