miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46822_miR1135:micropc
          Length = 93

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                        
Query: 25 ggaattacttgttggagaaatagatgtatc 54
          |||||||||||| | |||||||||||||||
Sbjct: 86 ggaattacttgtcgcagaaatagatgtatc 57



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 96  atttctgcgacaagtaattccg 117
           ||||||||||||||||||||||
Sbjct: 66  atttctgcgacaagtaattccg 87




>45199_miR1135:micropc
          Length = 93

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                        
Query: 25 ggaattacttgttggagaaatagatgtatc 54
          |||||||||||| | |||||||||||||||
Sbjct: 86 ggaattacttgtcgcagaaatagatgtatc 57



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 96  atttctgcgacaagtaattccg 117
           ||||||||||||||||||||||
Sbjct: 66  atttctgcgacaagtaattccg 87




>46650_miR1128:micropc
          Length = 114

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 73/88 (82%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttgttggagaaatagatgtatccaagatgtattttaagttccaagattcatccattttta 92
           |||| |||| ||||||||||| | |||||||||||  | | | |||| ||| ||||||||
Sbjct: 95  ttgtcggaggaatagatgtat-ctagatgtatttt--ggttctagatacattcattttta 39

                                       
Query: 93  accatttctgcgacaagtaattccggac 120
            |||||||| ||||||||| || |||||
Sbjct: 38  tccatttcttcgacaagtattttcggac 11




>46443_miR1128:micropc
          Length = 114

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 73/88 (82%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttgttggagaaatagatgtatccaagatgtattttaagttccaagattcatccattttta 92
           |||| |||| ||||||||||| | |||||||||||  | | | |||| ||| ||||||||
Sbjct: 95  ttgtcggaggaatagatgtat-ctagatgtatttt--ggttctagatacattcattttta 39

                                       
Query: 93  accatttctgcgacaagtaattccggac 120
            |||||||| ||||||||| || |||||
Sbjct: 38  tccatttcttcgacaagtattttcggac 11




>46231_miR1128:micropc
          Length = 114

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 73/88 (82%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttgttggagaaatagatgtatccaagatgtattttaagttccaagattcatccattttta 92
           |||| |||| ||||||||||| | |||||||||||  | | | |||| ||| ||||||||
Sbjct: 95  ttgtcggaggaatagatgtat-ctagatgtatttt--ggttctagatacattcattttta 39

                                       
Query: 93  accatttctgcgacaagtaattccggac 120
            |||||||| ||||||||| || |||||
Sbjct: 38  tccatttcttcgacaagtattttcggac 11




>46218_miR1128:micropc
          Length = 114

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 73/88 (82%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttgttggagaaatagatgtatccaagatgtattttaagttccaagattcatccattttta 92
           |||| |||| ||||||||||| | |||||||||||  | | | |||| ||| ||||||||
Sbjct: 95  ttgtcggaggaatagatgtat-ctagatgtatttt--ggttctagatacattcattttta 39

                                       
Query: 93  accatttctgcgacaagtaattccggac 120
            |||||||| ||||||||| || |||||
Sbjct: 38  tccatttcttcgacaagtattttcggac 11




>46180_miR1128:micropc
          Length = 114

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 73/88 (82%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttgttggagaaatagatgtatccaagatgtattttaagttccaagattcatccattttta 92
           |||| |||| ||||||||||| | |||||||||||  | | | |||| ||| ||||||||
Sbjct: 95  ttgtcggaggaatagatgtat-ctagatgtatttt--ggttctagatacattcattttta 39

                                       
Query: 93  accatttctgcgacaagtaattccggac 120
            |||||||| ||||||||| || |||||
Sbjct: 38  tccatttcttcgacaagtattttcggac 11




>46136_miR1128:micropc
          Length = 114

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 73/88 (82%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttgttggagaaatagatgtatccaagatgtattttaagttccaagattcatccattttta 92
           |||| |||| ||||||||||| | |||||||||||  | | | |||| ||| ||||||||
Sbjct: 95  ttgtcggaggaatagatgtat-ctagatgtatttt--ggttctagatacattcattttta 39

                                       
Query: 93  accatttctgcgacaagtaattccggac 120
            |||||||| ||||||||| || |||||
Sbjct: 38  tccatttcttcgacaagtattttcggac 11




>45836_miR1128:micropc
          Length = 114

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 73/88 (82%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttgttggagaaatagatgtatccaagatgtattttaagttccaagattcatccattttta 92
           |||| |||| ||||||||||| | |||||||||||  | | | |||| ||| ||||||||
Sbjct: 95  ttgtcggaggaatagatgtat-ctagatgtatttt--ggttctagatacattcattttta 39

                                       
Query: 93  accatttctgcgacaagtaattccggac 120
            |||||||| ||||||||| || |||||
Sbjct: 38  tccatttcttcgacaagtattttcggac 11




>45824_miR1128:micropc
          Length = 114

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 73/88 (82%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttgttggagaaatagatgtatccaagatgtattttaagttccaagattcatccattttta 92
           |||| |||| ||||||||||| | |||||||||||  | | | |||| ||| ||||||||
Sbjct: 95  ttgtcggaggaatagatgtat-ctagatgtatttt--ggttctagatacattcattttta 39

                                       
Query: 93  accatttctgcgacaagtaattccggac 120
            |||||||| ||||||||| || |||||
Sbjct: 38  tccatttcttcgacaagtattttcggac 11




>45818_miR1128:micropc
          Length = 114

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 73/88 (82%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttgttggagaaatagatgtatccaagatgtattttaagttccaagattcatccattttta 92
           |||| |||| ||||||||||| | |||||||||||  | | | |||| ||| ||||||||
Sbjct: 95  ttgtcggaggaatagatgtat-ctagatgtatttt--ggttctagatacattcattttta 39

                                       
Query: 93  accatttctgcgacaagtaattccggac 120
            |||||||| ||||||||| || |||||
Sbjct: 38  tccatttcttcgacaagtattttcggac 11




>45729_miR1128:micropc
          Length = 114

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 73/88 (82%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttgttggagaaatagatgtatccaagatgtattttaagttccaagattcatccattttta 92
           |||| |||| ||||||||||| | |||||||||||  | | | |||| ||| ||||||||
Sbjct: 95  ttgtcggaggaatagatgtat-ctagatgtatttt--ggttctagatacattcattttta 39

                                       
Query: 93  accatttctgcgacaagtaattccggac 120
            |||||||| ||||||||| || |||||
Sbjct: 38  tccatttcttcgacaagtattttcggac 11




>45649_miR1135:micropc
          Length = 95

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 94  ccatttctgcgacaagtaatt 114
           |||||||||||||||||||||
Sbjct: 66  ccatttctgcgacaagtaatt 86




>45575_miR1128:micropc
          Length = 114

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 73/88 (82%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttgttggagaaatagatgtatccaagatgtattttaagttccaagattcatccattttta 92
           |||| |||| ||||||||||| | |||||||||||  | | | |||| ||| ||||||||
Sbjct: 95  ttgtcggaggaatagatgtat-ctagatgtatttt--ggttctagatacattcattttta 39

                                       
Query: 93  accatttctgcgacaagtaattccggac 120
            |||||||| ||||||||| || |||||
Sbjct: 38  tccatttcttcgacaagtattttcggac 11




>45466_miR1128:micropc
          Length = 114

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 73/88 (82%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttgttggagaaatagatgtatccaagatgtattttaagttccaagattcatccattttta 92
           |||| |||| ||||||||||| | |||||||||||  | | | |||| ||| ||||||||
Sbjct: 95  ttgtcggaggaatagatgtat-ctagatgtatttt--ggttctagatacattcattttta 39

                                       
Query: 93  accatttctgcgacaagtaattccggac 120
            |||||||| ||||||||| || |||||
Sbjct: 38  tccatttcttcgacaagtattttcggac 11




>45150_miR1128:micropc
          Length = 114

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 73/88 (82%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttgttggagaaatagatgtatccaagatgtattttaagttccaagattcatccattttta 92
           |||| |||| ||||||||||| | |||||||||||  | | | |||| ||| ||||||||
Sbjct: 95  ttgtcggaggaatagatgtat-ctagatgtatttt--ggttctagatacattcattttta 39

                                       
Query: 93  accatttctgcgacaagtaattccggac 120
            |||||||| ||||||||| || |||||
Sbjct: 38  tccatttcttcgacaagtattttcggac 11




>45094_miR1128:micropc
          Length = 114

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 73/88 (82%), Gaps = 3/88 (3%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttgttggagaaatagatgtatccaagatgtattttaagttccaagattcatccattttta 92
           |||| |||| ||||||||||| | |||||||||||  | | | |||| ||| ||||||||
Sbjct: 95  ttgtcggaggaatagatgtat-ctagatgtatttt--ggttctagatacattcattttta 39

                                       
Query: 93  accatttctgcgacaagtaattccggac 120
            |||||||| ||||||||| || |||||
Sbjct: 38  tccatttcttcgacaagtattttcggac 11




>46065_miR1135:micropc
          Length = 89

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 94  ccatttctgcgacaagtaattccg 117
           |||||| |||||||||||||||||
Sbjct: 62  ccatttatgcgacaagtaattccg 85