miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45994_miR1436:micropc
          Length = 162

 Score =  117 bits (59), Expect = 4e-27
 Identities = 98/111 (88%)
 Strand = Plus / Plus

                                                                       
Query: 31  cctccgttcctaaatataagtctttttagagatttcactaggagactacatacggagcaa 90
           |||||||| ||||||||||||||||| || |||||| |||   ||||||||||  |||||
Sbjct: 5   cctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaa 64

                                                              
Query: 91  aatgaatgaatctacactctaaaatatgtttatatacattcgtatgtagtc 141
           ||||| ||||||||||||||||| ||||| ||||||||| |||||||||||
Sbjct: 65  aatgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtc 115



 Score = 79.8 bits (40), Expect = 8e-16
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                       
Query: 27  actccctccgttcctaaatataagtctttttagagatttcactaggagactacatacgga 86
           ||||||||||||||  |||||||||||||||||||||| ||||||  |||||||||||||
Sbjct: 162 actccctccgttccataatataagtctttttagagattccactagaggactacatacgga 103




>44799_miR1126:micropc
          Length = 86

 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 57/64 (89%)
 Strand = Plus / Plus

                                                                       
Query: 74  gactacatacggagcaaaatgaatgaatctacactctaaaatatgtttatatacattcgt 133
           |||||| ||||||||||||| |||||||||||||||||||||   | || ||||||||||
Sbjct: 10  gactacttacggagcaaaataaatgaatctacactctaaaatgcatctacatacattcgt 69

               
Query: 134 atgt 137
           ||||
Sbjct: 70  atgt 73




>45049_miR1126:micropc
          Length = 86

 Score = 63.9 bits (32), Expect = 5e-11
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 78  acatacggagcaaaatgaatgaatctacactctaaaatatgtttatatacattcgtatgt 137
           ||||||||||||||| || ||| | ||||||||| | ||||| ||||||||| |||||||
Sbjct: 73  acatacggagcaaaacgagtgattgtacactctacagtatgtctatatacatccgtatgt 14

               
Query: 138 agtc 141
           ||||
Sbjct: 13  agtc 10




>44826_miR1439:micropc
          Length = 172

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 94  gaatgaatctacactctaaaatatgtttatatacatt 130
           |||||||||||||| |||||| | ||||| |||||||
Sbjct: 91  gaatgaatctacacactaaaacaagtttagatacatt 127




>46433_miR1439:micropc
          Length = 153

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 26  tactccctccgttcctaaatataagtcttttt 57
           ||||||||||||||| |||| |||||| ||||
Sbjct: 152 tactccctccgttccaaaatgtaagtcgtttt 121