miRNEST 2.0, an integrative microRNA resource :: BLAST
>40293_bna-MIR390b:mirbase
Length = 105
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 14 gaagaatctgtaaagctcaggagggatagcgcca 47
||||||||||||||||||||||||||||||||||
Sbjct: 6 gaagaatctgtaaagctcaggagggatagcgcca 39
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
||||| ||||||||||||||||| || |||||
Sbjct: 67 gcgctgtccatcctgagtttcattggctcttc 98
>40072_ath-MIR390a:mirbase
Length = 107
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 14 gaagaatctgtaaagctcaggagggatagcgcca 47
||||||||||||||||||||||||||||||||||
Sbjct: 6 gaagaatctgtaaagctcaggagggatagcgcca 39
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||||||| || |||||
Sbjct: 69 gcgctatccatcctgagtttcattggctcttc 100
>39862_aly-MIR390a:mirbase
Length = 129
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 14 gaagaatctgtaaagctcaggagggatagcgcca 47
||||||||||||||||||||||||||||||||||
Sbjct: 17 gaagaatctgtaaagctcaggagggatagcgcca 50
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||||||| || |||||
Sbjct: 80 gcgctatccatcctgagtttcattggctcttc 111
>41131_tcc-MIR390b:mirbase
Length = 120
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagcgcca 47
||||||||||||||||||||||||||||||||
Sbjct: 11 agaatctgtaaagctcaggagggatagcgcca 42
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
|||||||| |||||||||||||||||||||||
Sbjct: 79 gcgctatctatcctgagtttcatgggttcttc 110
>41052_ghr-MIR390b:mirbase
Length = 132
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 12 tggaagaatctgtaaagctcaggagggatagcgcca 47
||||||||||||| ||||||||||||||||||||||
Sbjct: 4 tggaagaatctgttaagctcaggagggatagcgcca 39
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 107 tagcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||||||||| ||||||||
Sbjct: 92 tagcgctatccatcctgagtttcatcggttcttc 125
>41051_ghr-MIR390a:mirbase
Length = 124
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 12 tggaagaatctgtaaagctcaggagggatagcgcca 47
||||||||||||| ||||||||||||||||||||||
Sbjct: 1 tggaagaatctgttaagctcaggagggatagcgcca 36
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 107 tagcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||||||||| ||||||||
Sbjct: 89 tagcgctatccatcctgagtttcatcggttcttc 122
>40468_gma-MIR390a:mirbase
Length = 105
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagcgcca 47
||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgcca 32
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 96 ttgattttctgtagcgctatccatcctgagtttcatgggttct 138
||||| |||| | ||||||||||||||||||||||||| ||||
Sbjct: 54 ttgatcttctcttgcgctatccatcctgagtttcatggcttct 96
>40467_gma-MIR390a:mirbase
Length = 105
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagcgcca 47
||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgcca 32
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 96 ttgattttctgtagcgctatccatcctgagtttcatgggttct 138
||||| |||| | ||||||||||||||||||||||||| ||||
Sbjct: 54 ttgatcttctcttgcgctatccatcctgagtttcatggcttct 96
>41237_csi-MIR390:mirbase
Length = 154
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 14 gaagaatctgtaaagctcaggagggatagcgcca 47
||||||||||| ||||||||||||||||||||||
Sbjct: 9 gaagaatctgttaagctcaggagggatagcgcca 42
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||||||||| ||||||
Sbjct: 98 gcgctatccatcctgagtttcatggcttcttc 129
>41130_tcc-MIR390a:mirbase
Length = 129
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 107 tagcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||||||||| ||||||||
Sbjct: 86 tagcgctatccatcctgagtttcatcggttcttc 119
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 ctgtaaagctcaggagggatagcgcca 47
|||| ||||||||||||||||||||||
Sbjct: 16 ctgttaagctcaggagggatagcgcca 42
>41640_vvi-MIR390:mirbase
Length = 140
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagcgcca 47
||||||||| ||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcca 32
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
|||||||| ||||||||||||| |||||||||
Sbjct: 109 gcgctatctatcctgagtttcacgggttcttc 140
>41413_ptc-MIR390a:mirbase
Length = 119
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagcgcca 47
||||||||| ||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcca 32
>41053_ghr-MIR390c:mirbase
Length = 114
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagcgcca 47
||||||||| ||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcca 32
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 107 tagcgctatccatcctgagtttcatgggtt 136
||||||||||||||||||||||||| ||||
Sbjct: 85 tagcgctatccatcctgagtttcatcggtt 114
>40469_gma-MIR390b:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagc 43
||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagc 28
>41416_ptc-MIR390d:mirbase
Length = 106
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagcgcc 46
||||||||| |||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagttt 128
||||||||||||||||||||
Sbjct: 79 gcgctatccatcctgagttt 98
>41414_ptc-MIR390b:mirbase
Length = 106
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagcgcc 46
||||||||| |||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 95 tttgattttctgtagcgctatccatcctgagtttcat 131
||||||| || || |||||||||||||||||||||||
Sbjct: 65 tttgattctcagtggcgctatccatcctgagtttcat 101
>40294_bna-MIR390c:mirbase
Length = 128
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 21 ctgtaaagctcaggagggatagcgcca 47
|||||||||||||||||||||||||||
Sbjct: 18 ctgtaaagctcaggagggatagcgcca 44
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||| ||||| ||||||
Sbjct: 85 gcgctatccatcctgagttccatggcttcttc 116
>40292_bna-MIR390a:mirbase
Length = 144
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 21 ctgtaaagctcaggagggatagcgcca 47
|||||||||||||||||||||||||||
Sbjct: 28 ctgtaaagctcaggagggatagcgcca 54
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||| |||| ||||||
Sbjct: 95 gcgctatccatcctgagttctatggcttcttc 126
>40705_mtr-MIR390:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 96 ttgattttctgtagcgctatccatcctgagtttcatgg 133
||||| |||| | |||||||||||||||||||||||||
Sbjct: 63 ttgatcttctcttgcgctatccatcctgagtttcatgg 100
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 ctgtaaagctcaggagggatagcgcca 47
|||| ||||||||||||||||||||||
Sbjct: 1 ctgttaagctcaggagggatagcgcca 27
>40372_rco-MIR390b:mirbase
Length = 122
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 102 ttctgtagcgctatccatcctgagtttcat 131
|||| |||||||||||||||||||||||||
Sbjct: 89 ttctatagcgctatccatcctgagtttcat 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgcca 47
||||||||||||||||||||||
Sbjct: 6 aagctcaggagggatagcgcca 27
>41415_ptc-MIR390c:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 19 atctgtaaagctcaggagggatagcgcca 47
|||||| ||||||||||||||||||||||
Sbjct: 4 atctgttaagctcaggagggatagcgcca 32
>40073_ath-MIR390b:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 taaagctcaggagggatagcgcca 47
||||||||||||||||||||||||
Sbjct: 13 taaagctcaggagggatagcgcca 36
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||| ||| | ||||||
Sbjct: 87 gcgctatccatcctgagttccatagcttcttc 118
>39863_aly-MIR390b:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 taaagctcaggagggatagcgcca 47
||||||||||||||||||||||||
Sbjct: 17 taaagctcaggagggatagcgcca 40
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||| ||| | ||||||
Sbjct: 91 gcgctatccatcctgagttccatagcttcttc 122
>41996_osa-MIR390:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgccacgaaa 52
||||||||||||||||||||| |||||
Sbjct: 19 aagctcaggagggatagcgcctcgaaa 45
>40371_rco-MIR390a:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 ctgtaaagctcaggagggatagcgcc 46
|||| |||||||||||||||||||||
Sbjct: 1 ctgttaagctcaggagggatagcgcc 26
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttca 130
||||||||||||||||||||||
Sbjct: 82 gcgctatccatcctgagtttca 103
>39485_ppt-MIR390a:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgcca 47
||||||||||||||||||||||
Sbjct: 16 aagctcaggagggatagcgcca 37
>42785_zma-MIR390b:mirbase
Length = 192
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgcc 46
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42784_zma-MIR390a:mirbase
Length = 181
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgcc 46
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42565_sbi-MIR390:mirbase
Length = 179
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgcc 46
|||||||||||||||||||||
Sbjct: 3 aagctcaggagggatagcgcc 23
>41773_bdi-MIR390b:mirbase
Length = 186
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgcc 46
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>41772_bdi-MIR390:mirbase
Length = 209
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgcc 46
|||||||||||||||||||||
Sbjct: 31 aagctcaggagggatagcgcc 51
>39486_ppt-MIR390b:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgcc 46
|||||||||||||||||||||
Sbjct: 28 aagctcaggagggatagcgcc 48
>39487_ppt-MIR390c:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 27 agctcaggagggatagcgcc 46
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
