miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>40408_ahy-MIR3509:mirbase
          Length = 146

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                          
Query: 12 cgtgaagttgataattgagagccgttagataaaaatttagtcaaatca 59
          |||||||||||||  |||||| |||||||| |||||||||||||||||
Sbjct: 97 cgtgaagttgatatctgagagtcgttagatgaaaatttagtcaaatca 50



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 57  tcatctaacgaatctcagttatcaacttcatgtaaagtc 95
           ||||||||||| |||||| ||||||||||| || |||||
Sbjct: 66  tcatctaacgactctcagatatcaacttcacgtgaagtc 104




>40407_ahy-MIR3509:mirbase
          Length = 146

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                          
Query: 12 cgtgaagttgataattgagagccgttagataaaaatttagtcaaatca 59
          |||||||||||||  |||||| |||||||| |||||||||||||||||
Sbjct: 97 cgtgaagttgatatctgagagtcgttagatgaaaatttagtcaaatca 50



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 57  tcatctaacgaatctcagttatcaacttcatgtaaagtc 95
           ||||||||||| |||||| ||||||||||| || |||||
Sbjct: 66  tcatctaacgactctcagatatcaacttcacgtgaagtc 104