miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>40408_ahy-MIR3509:mirbase
          Length = 146

 Score =  149 bits (75), Expect = 7e-37
 Identities = 99/107 (92%)
 Strand = Plus / Minus

                                                                       
Query: 8   taaggtgaaaactcgggtgaagtcgacttcacgtgaagttgatatctgagagctattaga 67
           |||||||||||||| |||||||| ||||||||||||||||||||||||||||   |||||
Sbjct: 128 taaggtgaaaactcaggtgaagttgacttcacgtgaagttgatatctgagagtcgttaga 69

                                                          
Query: 68  tgaaaatttagtcaaatcaattaaatcatctaacgactctcaggtat 114
           ||||||||||||||||||||| ||||||||||||| |||||| ||||
Sbjct: 68  tgaaaatttagtcaaatcaatcaaatcatctaacggctctcaagtat 22



 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 93  tcatctaacgactctcaggtatcaacttaacgtaaaatcgactgcacctgagtttccacc 152
           |||||||||||||||||| ||||||||| |||| || || ||| ||||||||||| ||||
Sbjct: 66  tcatctaacgactctcagatatcaacttcacgtgaagtcaacttcacctgagttttcacc 125

             
Query: 153 tt 154
           ||
Sbjct: 126 tt 127




>40407_ahy-MIR3509:mirbase
          Length = 146

 Score =  149 bits (75), Expect = 7e-37
 Identities = 99/107 (92%)
 Strand = Plus / Minus

                                                                       
Query: 8   taaggtgaaaactcgggtgaagtcgacttcacgtgaagttgatatctgagagctattaga 67
           |||||||||||||| |||||||| ||||||||||||||||||||||||||||   |||||
Sbjct: 128 taaggtgaaaactcaggtgaagttgacttcacgtgaagttgatatctgagagtcgttaga 69

                                                          
Query: 68  tgaaaatttagtcaaatcaattaaatcatctaacgactctcaggtat 114
           ||||||||||||||||||||| ||||||||||||| |||||| ||||
Sbjct: 68  tgaaaatttagtcaaatcaatcaaatcatctaacggctctcaagtat 22



 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 93  tcatctaacgactctcaggtatcaacttaacgtaaaatcgactgcacctgagtttccacc 152
           |||||||||||||||||| ||||||||| |||| || || ||| ||||||||||| ||||
Sbjct: 66  tcatctaacgactctcagatatcaacttcacgtgaagtcaacttcacctgagttttcacc 125

             
Query: 153 tt 154
           ||
Sbjct: 126 tt 127