miRNEST 2.0, an integrative microRNA resource :: BLAST
>41578_vvi-MIR162:mirbase
Length = 103
Score = 85.7 bits (43), Expect = 8e-18
Identities = 91/105 (86%), Gaps = 4/105 (3%)
Strand = Plus / Plus
Query: 22 tgaagtcactggaggcagcggttcatcgatctcttcctgaatttggctgtggagtcatac 81
||||||||||||| ||||||||||||||||||||||||||| || | |||| | | |
Sbjct: 1 tgaagtcactggatgcagcggttcatcgatctcttcctgaaatt-gttgtgaa---aaaa 56
Query: 82 acaaagcaagaatcggtcgataaacctctgcatccagcgctcact 126
|| | ||||||||||||||||||||||||||||||||| |||||
Sbjct: 57 gcagatcaagaatcggtcgataaacctctgcatccagcgttcact 101
>40663_mtr-MIR162:mirbase
Length = 124
Score = 79.8 bits (40), Expect = 5e-16
Identities = 88/103 (85%), Gaps = 2/103 (1%)
Strand = Plus / Plus
Query: 26 gtcactggaggcagcggttcatcgatctcttcctgaatttggctgtggagtcatacacaa 85
||||||||| |||||||||||||||||| ||||||||||| | | | || || | |
Sbjct: 17 gtcactggatgcagcggttcatcgatctgttcctgaattttgttt--gtctcgtaaaaca 74
Query: 86 agcaagaatcggtcgataaacctctgcatccagcgctcacttt 128
| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 75 aacatgaatcggtcgataaacctctgcatccagcgctcacttt 117
>40437_gma-MIR162:mirbase
Length = 102
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 21 gtgaagtcactggaggcagcggttcatcgatctcttcctgaat 63
|||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 gtgaagtcactggatgcagcggttcatcgatctcttcctgaat 43
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccagcgctcact 126
|||||| |||||||||||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatccagcgctcact 101
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 24 aagtcactggaggcagcggttcatcgatctcttcctg 60
|||||||||||||||||||||||||||||||||||||
Sbjct: 7 aagtcactggaggcagcggttcatcgatctcttcctg 43
>40025_ath-MIR162b:mirbase
Length = 111
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 84 aaagcaagaatcggtcgataaacctctgcatccagcgct 122
||||||||||||| |||||||||||||||||||||||||
Sbjct: 65 aaagcaagaatcgatcgataaacctctgcatccagcgct 103
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 21 gtgaagtcactggaggcagcggttcatcgatc 52
|||||||| |||||||||||||||||||||||
Sbjct: 3 gtgaagtcgctggaggcagcggttcatcgatc 34
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctg 60
|||| |||||||||||||||||||||||||||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatctcttcctg 41
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 98 tcgataaacctctgcatccagcgct 122
|||||||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccagcgct 102
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 28 cactggaggcagcggttcatcgatctcttcctga 61
||||||||||||||||||||||||||||||||||
Sbjct: 22 cactggaggcagcggttcatcgatctcttcctga 55
>40342_rco-MIR162:mirbase
Length = 101
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 27 tcactggaggcagcggttcatcgatctcttcctg 60
||||||||||||||||||||||||||||||||||
Sbjct: 1 tcactggaggcagcggttcatcgatctcttcctg 34
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccagcgct 122
|||||| |||||||||||||||||||||||||
Sbjct: 69 gaatcgatcgataaacctctgcatccagcgct 100
>41090_tcc-MIR162:mirbase
Length = 131
Score = 65.9 bits (33), Expect = 8e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 28 cactggaggcagcggttcatcgatctcttcctg 60
|||||||||||||||||||||||||||||||||
Sbjct: 19 cactggaggcagcggttcatcgatctcttcctg 51
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctgaa 62
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tcgataaacctctgcatccag 118
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctgaa 62
|||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tcgataaacctctgcatccag 118
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>41220_csi-MIR162:mirbase
Length = 201
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 21 gtgaagtcactggaggcagcggttcatcgatc 52
||||||||||||||||||||||||||||||||
Sbjct: 80 gtgaagtcactggaggcagcggttcatcgatc 111
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccagcgctcact 126
|||||| |||||||||||||||||||||||||||||
Sbjct: 154 gaatcgatcgataaacctctgcatccagcgctcact 189
>40024_ath-MIR162a:mirbase
Length = 140
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 25 agtcactggaggcagcggttcatcgatctcttcctg 60
|||| |||||||||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 84 aaagcaagaatcggtcgataaacctctgcatccagcg 120
|||||| |||| | |||||||||||||||||||||||
Sbjct: 75 aaagcatgaatagatcgataaacctctgcatccagcg 111
>39812_aly-MIR162a:mirbase
Length = 228
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 25 agtcactggaggcagcggttcatcgatctcttcctg 60
|||| |||||||||||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatctcttcctg 98
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 84 aaagcaagaatcggtcgataaacctctgcatccagcg 120
|||||| |||| | |||||||||||||||||||||||
Sbjct: 122 aaagcatgaatagatcgataaacctctgcatccagcg 158
>39813_aly-MIR162b:mirbase
Length = 184
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 84 aaagcaagaatcggtcgataaacctctgcatccagcgct 122
|||||| |||||| |||||||||||||||||||||||||
Sbjct: 99 aaagcatgaatcgatcgataaacctctgcatccagcgct 137
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 21 gtgaagtcactggaggcagcggttcatcgatc 52
|||||||| |||||||||||||||||||||||
Sbjct: 41 gtgaagtcgctggaggcagcggttcatcgatc 72
>42708_zma-MIR162:mirbase
Length = 130
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
|||||| |||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
|||||| |||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41930_osa-MIR162b:mirbase
Length = 134
Score = 46.1 bits (23), Expect = 7e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 82 acaaagcaagaatcggtcgataaacctctgcatccagcgctcacttt 128
|||| ||| |||||| ||||||| ||||||||||||| ||||||||
Sbjct: 88 acaacgcaggaatcgatcgataagcctctgcatccagatctcacttt 134
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatcc 116
|||||| |||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
