miRNEST 2.0, an integrative microRNA resource :: BLAST
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 222 bits (112), Expect = 6e-59
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 48 gcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcacca 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcacca 62
Query: 108 tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 159
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 114
>42648_tae-MIR444:mirbase
Length = 426
Score = 218 bits (110), Expect = 1e-57
Identities = 149/162 (91%)
Strand = Plus / Plus
Query: 1 gtggcggcaccaagcatgaagcaacaactgcagtacttgtggggaaagcacaagtaggac 60
||||||||||| ||||||| |||||||||||| |||||| |||||| || ||||||||||
Sbjct: 17 gtggcggcaccgagcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggac 76
Query: 61 accaacattacctgcaagcaagacgcaaaattaatagaacatcaccatacttgtggcttt 120
||| |||||| ||||| |||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 77 acctgcattacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggcttt 136
Query: 121 cttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
|||||||||| |||||||||||||||||||||||||||||||
Sbjct: 137 cttgcaagtcatgcagttgctgcctcaagcttgctgcctccc 178
>42649_tae-MIR444b:mirbase
Length = 162
Score = 121 bits (61), Expect = 2e-28
Identities = 133/161 (82%), Gaps = 17/161 (10%)
Strand = Plus / Plus
Query: 1 gtggcggcaccaagcatgaagcaacaactgcagtacttgtggggaaagcacaagtaggac 60
||||||||||| ||||||| |||||||||||| |||||| |||||| || ||||||||||
Sbjct: 10 gtggcggcaccgagcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggac 69
Query: 61 accaacattacctgcaagcaagacgcaaaattaatagaacatcaccatacttgtggcttt 120
||| |||||| ||||| |||| |||| ||||||||||||||||
Sbjct: 70 acctgcattacttgcaaacaaggcgca-----------------ccatacttgtggcttt 112
Query: 121 cttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 161
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 cttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 153
>42089_osa-MIR444d:mirbase
Length = 143
Score = 101 bits (51), Expect = 2e-22
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 108 tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 79 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccc 133
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 6 ggcaccaagcatgaagcaacaactgcagtacttg 39
|||||||||||||| |||||||||||| ||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttg 50
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 111 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 158
||||| ||||||||||||| |||||||| ||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
>42088_osa-MIR444d:mirbase
Length = 143
Score = 101 bits (51), Expect = 2e-22
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 108 tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 79 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccc 133
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 6 ggcaccaagcatgaagcaacaactgcagtacttg 39
|||||||||||||| |||||||||||| ||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttg 50
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 111 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 158
||||| ||||||||||||| |||||||| ||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
>42087_osa-MIR444d:mirbase
Length = 143
Score = 101 bits (51), Expect = 2e-22
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 108 tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 79 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccc 133
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 6 ggcaccaagcatgaagcaacaactgcagtacttg 39
|||||||||||||| |||||||||||| ||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttg 50
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 111 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 158
||||| ||||||||||||| |||||||| ||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 79.8 bits (40), Expect = 6e-16
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 106 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttg 153
|||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 59 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 106
Score = 46.1 bits (23), Expect = 8e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 111 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttg 153
||||| ||||||||||||| ||||||| |||||||| |||||
Sbjct: 43 ttgtgactttcttgcaagtaatgcagttcctgcctcatgcttg 1
>42091_osa-MIR444f:mirbase
Length = 154
Score = 73.8 bits (37), Expect = 4e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 117 ctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 161
||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 71.9 bits (36), Expect = 1e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 106 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttg 153
||||||||||| |||||||||||| ||||||||| |||||||||||||
Sbjct: 58 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttg 105
Score = 46.1 bits (23), Expect = 8e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 111 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttg 153
||||| ||||||||||||| ||||||| |||||||| |||||
Sbjct: 43 ttgtgactttcttgcaagtaatgcagttcctgcctcatgcttg 1
>42082_osa-MIR444a:mirbase
Length = 131
Score = 69.9 bits (35), Expect = 6e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 119 ttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 161
||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
>42081_osa-MIR444a:mirbase
Length = 131
Score = 69.9 bits (35), Expect = 6e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 119 ttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 161
||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
>42084_osa-MIR444b:mirbase
Length = 138
Score = 65.9 bits (33), Expect = 9e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
|||||||||||| ||||||||| || |||||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccc 130
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttg 153
||||||||||| |||||||||||||| ||||||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagcttg 18
>42083_osa-MIR444b:mirbase
Length = 138
Score = 65.9 bits (33), Expect = 9e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
|||||||||||| ||||||||| || |||||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccc 130
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttg 153
||||||||||| |||||||||||||| ||||||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagcttg 18
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 65.9 bits (33), Expect = 9e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 117 ctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 161
||||||||||||| |||||||||||| ||||||||||||| ||||
Sbjct: 77 ctttcttgcaagttgtgcagttgctgtctcaagcttgctgactcc 121
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 6 ggcaccaagcatgaagcaacaactgcagtactt 38
|||||||||||||| |||||||||||| |||||
Sbjct: 4 ggcaccaagcatgaggcaacaactgcattactt 36
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 158
|||||||||||| ||||||||| || |||||||||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttg 153
||||||||||| ||||||||||||||| ||||||
Sbjct: 41 tttcttgcaagatatgcagttgctgcctctagcttg 6
>42086_osa-MIR444c:mirbase
Length = 138
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
||||||||||| ||||||||| || |||||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccc 128
Score = 40.1 bits (20), Expect = 5e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 161
||||||||||| ||||||||||| ||| ||||||| ||||||
Sbjct: 57 tttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>42085_osa-MIR444c:mirbase
Length = 138
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
||||||||||| ||||||||| || |||||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccc 128
Score = 40.1 bits (20), Expect = 5e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 161
||||||||||| ||||||||||| ||| ||||||| ||||||
Sbjct: 57 tttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>41805_bdi-MIR444:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 132 tgcagttgctgcctcaagcttgctgc 157
||||||||||||||||||||||||||
Sbjct: 85 tgcagttgctgcctcaagcttgctgc 110
>42090_osa-MIR444e:mirbase
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 132 tgcagttgctgcctcaagcttgctgcct 159
||||||||||||||||||||| ||||||
Sbjct: 99 tgcagttgctgcctcaagcttactgcct 126