miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41893_hvu-MIR444a:mirbase
          Length = 114

 Score =  222 bits (112), Expect = 6e-59
 Identities = 112/112 (100%)
 Strand = Plus / Plus

                                                                       
Query: 48  gcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcacca 107
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   gcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcacca 62

                                                               
Query: 108 tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 159
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 114




>42648_tae-MIR444:mirbase
          Length = 426

 Score =  218 bits (110), Expect = 1e-57
 Identities = 149/162 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtggcggcaccaagcatgaagcaacaactgcagtacttgtggggaaagcacaagtaggac 60
           ||||||||||| ||||||| |||||||||||| |||||| |||||| || ||||||||||
Sbjct: 17  gtggcggcaccgagcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggac 76

                                                                       
Query: 61  accaacattacctgcaagcaagacgcaaaattaatagaacatcaccatacttgtggcttt 120
           |||  |||||| ||||| |||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 77  acctgcattacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggcttt 136

                                                     
Query: 121 cttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
           |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 137 cttgcaagtcatgcagttgctgcctcaagcttgctgcctccc 178




>42649_tae-MIR444b:mirbase
          Length = 162

 Score =  121 bits (61), Expect = 2e-28
 Identities = 133/161 (82%), Gaps = 17/161 (10%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtggcggcaccaagcatgaagcaacaactgcagtacttgtggggaaagcacaagtaggac 60
           ||||||||||| ||||||| |||||||||||| |||||| |||||| || ||||||||||
Sbjct: 10  gtggcggcaccgagcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggac 69

                                                                       
Query: 61  accaacattacctgcaagcaagacgcaaaattaatagaacatcaccatacttgtggcttt 120
           |||  |||||| ||||| |||| ||||                 ||||||||||||||||
Sbjct: 70  acctgcattacttgcaaacaaggcgca-----------------ccatacttgtggcttt 112

                                                    
Query: 121 cttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 161
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 cttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 153




>42089_osa-MIR444d:mirbase
          Length = 143

 Score =  101 bits (51), Expect = 2e-22
 Identities = 54/55 (98%)
 Strand = Plus / Plus

                                                                  
Query: 108 tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
           |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 79  tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccc 133



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 6  ggcaccaagcatgaagcaacaactgcagtacttg 39
          |||||||||||||| |||||||||||| ||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttg 50



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 111 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 158
           ||||| |||||||||||||  |||||||| ||||||| ||||| ||||
Sbjct: 64  ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17




>42088_osa-MIR444d:mirbase
          Length = 143

 Score =  101 bits (51), Expect = 2e-22
 Identities = 54/55 (98%)
 Strand = Plus / Plus

                                                                  
Query: 108 tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
           |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 79  tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccc 133



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 6  ggcaccaagcatgaagcaacaactgcagtacttg 39
          |||||||||||||| |||||||||||| ||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttg 50



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 111 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 158
           ||||| |||||||||||||  |||||||| ||||||| ||||| ||||
Sbjct: 64  ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17




>42087_osa-MIR444d:mirbase
          Length = 143

 Score =  101 bits (51), Expect = 2e-22
 Identities = 54/55 (98%)
 Strand = Plus / Plus

                                                                  
Query: 108 tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
           |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 79  tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcctccc 133



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 6  ggcaccaagcatgaagcaacaactgcagtacttg 39
          |||||||||||||| |||||||||||| ||||||
Sbjct: 17 ggcaccaagcatgaggcaacaactgcattacttg 50



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 111 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 158
           ||||| |||||||||||||  |||||||| ||||||| ||||| ||||
Sbjct: 64  ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17




>42479_ssp-MIR444b:mirbase
          Length = 106

 Score = 79.8 bits (40), Expect = 6e-16
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                           
Query: 106 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttg 153
           |||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 59  catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 106



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 111 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttg 153
           ||||| |||||||||||||  ||||||| |||||||| |||||
Sbjct: 43  ttgtgactttcttgcaagtaatgcagttcctgcctcatgcttg 1




>42091_osa-MIR444f:mirbase
          Length = 154

 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 43/45 (95%)
 Strand = Plus / Plus

                                                        
Query: 117 ctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 161
           ||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153




>42478_ssp-MIR444a:mirbase
          Length = 105

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 106 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttg 153
           ||||||||||| |||||||||||| ||||||||| |||||||||||||
Sbjct: 58  catacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttg 105



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 111 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttg 153
           ||||| |||||||||||||  ||||||| |||||||| |||||
Sbjct: 43  ttgtgactttcttgcaagtaatgcagttcctgcctcatgcttg 1




>42082_osa-MIR444a:mirbase
          Length = 131

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 119 ttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 161
           |||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 81  ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123




>42081_osa-MIR444a:mirbase
          Length = 131

 Score = 69.9 bits (35), Expect = 6e-13
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 119 ttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 161
           |||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 81  ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123




>42084_osa-MIR444b:mirbase
          Length = 138

 Score = 65.9 bits (33), Expect = 9e-12
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                        
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
           |||||||||||| ||||||||| || |||||||||||||||||||
Sbjct: 86  tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccc 130



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttg 153
           |||||||||||  |||||||||||||| ||||||||
Sbjct: 53  tttcttgcaagatgtgcagttgctgccacaagcttg 18




>42083_osa-MIR444b:mirbase
          Length = 138

 Score = 65.9 bits (33), Expect = 9e-12
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                        
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
           |||||||||||| ||||||||| || |||||||||||||||||||
Sbjct: 86  tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccc 130



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttg 153
           |||||||||||  |||||||||||||| ||||||||
Sbjct: 53  tttcttgcaagatgtgcagttgctgccacaagcttg 18




>41894_hvu-MIR444b:mirbase
          Length = 121

 Score = 65.9 bits (33), Expect = 9e-12
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                        
Query: 117 ctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 161
           ||||||||||||| |||||||||||| ||||||||||||| ||||
Sbjct: 77  ctttcttgcaagttgtgcagttgctgtctcaagcttgctgactcc 121



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                           
Query: 6  ggcaccaagcatgaagcaacaactgcagtactt 38
          |||||||||||||| |||||||||||| |||||
Sbjct: 4  ggcaccaagcatgaggcaacaactgcattactt 36




>42480_ssp-MIR444c:mirbase
          Length = 108

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 158
           |||||||||||| ||||||||| || |||||||||||||||
Sbjct: 68  tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttg 153
           |||||||||||   ||||||||||||||| ||||||
Sbjct: 41  tttcttgcaagatatgcagttgctgcctctagcttg 6




>42086_osa-MIR444c:mirbase
          Length = 138

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
           |||||||||||  ||||||||| || |||||||||||||||||||
Sbjct: 84  tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccc 128



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 161
           |||||||||||   ||||||||||| ||| ||||||| ||||||
Sbjct: 57  tttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14




>42085_osa-MIR444c:mirbase
          Length = 138

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctccc 162
           |||||||||||  ||||||||| || |||||||||||||||||||
Sbjct: 84  tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccc 128



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 118 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 161
           |||||||||||   ||||||||||| ||| ||||||| ||||||
Sbjct: 57  tttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14




>41805_bdi-MIR444:mirbase
          Length = 110

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 132 tgcagttgctgcctcaagcttgctgc 157
           ||||||||||||||||||||||||||
Sbjct: 85  tgcagttgctgcctcaagcttgctgc 110




>42090_osa-MIR444e:mirbase
          Length = 140

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 132 tgcagttgctgcctcaagcttgctgcct 159
           ||||||||||||||||||||| ||||||
Sbjct: 99  tgcagttgctgcctcaagcttactgcct 126