miRNEST 2.0, an integrative microRNA resource :: BLAST
>40338_rco-MIR159:mirbase
Length = 180
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagaggatct 41
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Sbjct: 6 gagctccttgaagtccaatagaggatct 33
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 ggattgaagggagctctaca 179
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Sbjct: 158 ggattgaagggagctctaca 177
>40432_gma-MIR159a:mirbase
Length = 214
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 7 tgaagtagagctccttgaagtccaatagaggatct 41
|||||| ||||||||||||||||||| ||||||||
Sbjct: 16 tgaagtggagctccttgaagtccaattgaggatct 50
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 ggattgaagggagctctacacc 181
||||||||||||||||||||||
Sbjct: 178 ggattgaagggagctctacacc 199
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 52.0 bits (26), Expect = 2e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgctg 63
|||||||||||||||||||||||| ||| | |||| | || |||||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctg 60
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 160 ggattgaagggagctctacacctc 183
||||||||||||||||||||||||
Sbjct: 163 ggattgaagggagctctacacctc 186
>41922_osa-MIR159f:mirbase
Length = 188
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 160 ggattgaagggagctctacacctc 183
||||||||||||||||||||||||
Sbjct: 161 ggattgaagggagctctacacctc 184
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagagg 37
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagagg 37
||||||||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagagg 36
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagaggatct 41
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagaggatct 41
||||||||||||||||||| ||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatct 31
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaataga 35
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Sbjct: 13 gagctccttgaagtccaataga 34
>40397_ahy-MIR159:mirbase
Length = 197
Score = 42.1 bits (21), Expect = 1e-04
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagaggatctgagtgggaatatcgagctgct 62
|||||||||||||||||| ||||| ||| ||||| | || ||||||||
Sbjct: 5 gagctccttgaagtccaacagagggtcttggtgggtagattgagctgct 53
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 ggattgaagggagctctaca 179
||||||||||||||||||||
Sbjct: 160 ggattgaagggagctctaca 179
>41218_csi-MIR159:mirbase
Length = 216
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 14 gagctccttgaagtccaatagagg 37
|||||||||||||||||| |||||
Sbjct: 14 gagctccttgaagtccaaaagagg 37
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 ggattgaagggagctctaca 179
||||||||||||||||||||
Sbjct: 155 ggattgaagggagctctaca 174
>40311_bra-MIR159a:mirbase
Length = 185
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 ggattgaagggagctctaca 179
||||||||||||||||||||
Sbjct: 166 ggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 ggattgaagggagctctaca 179
||||||||||||||||||||
Sbjct: 164 ggattgaagggagctctaca 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 8 gaagtagagctccttgaagt 27
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Sbjct: 17 gaagtagagctccttgaagt 36
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 160 ggattgaagggagctctaca 179
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Sbjct: 186 ggattgaagggagctctaca 205
