miRNEST 2.0, an integrative microRNA resource :: BLAST
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 72 aggatgagaatcttgatgatgctgcatcggcaata 106
|||||||||||||||||||||||||||||||||||
Sbjct: 35 aggatgagaatcttgatgatgctgcatcggcaata 1
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 69.9 bits (35), Expect = 4e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 68 tttgaggatgagaatcttgatgatgctgcatcggcaataaatg 110
|||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 110 tttgagcatgagaatcttgatgatgctgcatcggccataaatg 152
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 76 tgagaatcttgatgatgctgcatcggcaataaa 108
|||||||||||||||||||||||||||||||||
Sbjct: 147 tgagaatcttgatgatgctgcatcggcaataaa 179
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 6 agtcgttgttttccggcgtggcatcatcaagattcac 42
||||||||||| | || || |||||||||||||||||
Sbjct: 6 agtcgttgtttgcgggtgtagcatcatcaagattcac 42
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 67 ttttgaggatgagaatcttgatgatgctgcatcggcaata 106
||||| || |||||||||||||||||||||||||||||||
Sbjct: 40 ttttggggttgagaatcttgatgatgctgcatcggcaata 1
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 76 tgagaatcttgatgatgctgcatcggcaataa 107
||||||||||||||||||||||||||||||||
Sbjct: 130 tgagaatcttgatgatgctgcatcggcaataa 161
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 76 tgagaatcttgatgatgctgcatcggcaataa 107
||||||||||||||||||||||||||||||||
Sbjct: 109 tgagaatcttgatgatgctgcatcggcaataa 140
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 74 gatgagaatcttgatgatgctgcatcggcaa 104
|||||||||||||||||||||||||||||||
Sbjct: 95 gatgagaatcttgatgatgctgcatcggcaa 125
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcatcggcaataaatggct 113
||||||||||||||||||| |||||||||||||||
Sbjct: 116 gaatcttgatgatgctgcagcggcaataaatggct 150
>39852_aly-MIR172a:mirbase
Length = 149
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 75 atgagaatcttgatgatgctgcatcggcaat 105
|||||||||||||||||||||||||||||||
Sbjct: 96 atgagaatcttgatgatgctgcatcggcaat 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 gtggcatcatcaagattcac 42
||||||||||||||||||||
Sbjct: 26 gtggcatcatcaagattcac 45
>40063_ath-MIR172a:mirbase
Length = 102
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 75 atgagaatcttgatgatgctgcatcggc 102
||||||||||||||||||||||||||||
Sbjct: 75 atgagaatcttgatgatgctgcatcggc 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 gtggcatcatcaagattcac 42
||||||||||||||||||||
Sbjct: 5 gtggcatcatcaagattcac 24
>41993_osa-MIR172d:mirbase
Length = 130
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 74 gatgagaatcttgatgatgctgcatcggcaa 104
|||||||||||||||||||||||||| ||||
Sbjct: 87 gatgagaatcttgatgatgctgcatcagcaa 117
>41725_ata-MIR172:mirbase
Length = 277
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 73 ggatgagaatcttgatgatgctgcatc 99
|||||||||||||||||||||||||||
Sbjct: 204 ggatgagaatcttgatgatgctgcatc 230
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 74 gatgagaatcttgatgatgctgcatcggcaa 104
|||| ||||||||||||||||||||||||||
Sbjct: 100 gatgggaatcttgatgatgctgcatcggcaa 130
>40066_ath-MIR172d:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 2e-08
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 76 tgagaatcttgatgatgctgcatcggcaa-taaatggct 113
|||||||||||||||||||||| |||||| |||||||||
Sbjct: 86 tgagaatcttgatgatgctgcagcggcaattaaatggct 124
>39855_aly-MIR172d:mirbase
Length = 163
Score = 54.0 bits (27), Expect = 2e-08
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 76 tgagaatcttgatgatgctgcatcggcaa-taaatggct 113
|||||||||||||||||||||| |||||| |||||||||
Sbjct: 110 tgagaatcttgatgatgctgcagcggcaattaaatggct 148
>41633_vvi-MIR172c:mirbase
Length = 138
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcatcggcaataaa 108
||||||||||||||||||| ||||||||||
Sbjct: 109 gaatcttgatgatgctgcagcggcaataaa 138
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcatcggcaa 104
||||||||||||||||||||||||||
Sbjct: 154 gaatcttgatgatgctgcatcggcaa 179
>41127_tcc-MIR172d:mirbase
Length = 129
Score = 52.0 bits (26), Expect = 9e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 76 tgagaatcttgatgatgctgcatcggcaataaatggct 113
|||||||| |||||||||||||| |||||| |||||||
Sbjct: 87 tgagaatcctgatgatgctgcattggcaatgaatggct 124
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 gtggcatcatcaagattcac 42
||||||||||||||||||||
Sbjct: 23 gtggcatcatcaagattcac 42
>40459_gma-MIR172b:mirbase
Length = 153
Score = 52.0 bits (26), Expect = 9e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 76 tgagaatcttgatgatgctgcatcggcaataaatggct 113
|||||||||||||||||||||||| || ||||| ||||
Sbjct: 112 tgagaatcttgatgatgctgcatcagccataaacggct 149
>42778_zma-MIR172d:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 gatgagaatcttgatgatgctgcat 98
|||||||||||||||||||||||||
Sbjct: 50 gatgagaatcttgatgatgctgcat 74
>42777_zma-MIR172c:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 gatgagaatcttgatgatgctgcat 98
|||||||||||||||||||||||||
Sbjct: 99 gatgagaatcttgatgatgctgcat 123
>42776_zma-MIR172b:mirbase
Length = 126
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 gatgagaatcttgatgatgctgcat 98
|||||||||||||||||||||||||
Sbjct: 102 gatgagaatcttgatgatgctgcat 126
>42559_sbi-MIR172c:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 gatgagaatcttgatgatgctgcat 98
|||||||||||||||||||||||||
Sbjct: 95 gatgagaatcttgatgatgctgcat 119
>42557_sbi-MIR172a:mirbase
Length = 102
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 gatgagaatcttgatgatgctgcat 98
|||||||||||||||||||||||||
Sbjct: 78 gatgagaatcttgatgatgctgcat 102
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 73 ggatgagaatcttgatgatgctgca 97
||||| |||||||||||||||||||
Sbjct: 26 ggatgtgaatcttgatgatgctgca 2
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 74 gatgagaatcttgatgatgctgcat 98
|||||||||||||||||||||||||
Sbjct: 75 gatgagaatcttgatgatgctgcat 99
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 79 gaatcttgatgatgctgcatc 99
|||||||||||||||||||||
Sbjct: 28 gaatcttgatgatgctgcatc 8
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcatcggcaataa 107
||||||||||||||||||| |||||||||
Sbjct: 115 gaatcttgatgatgctgcagcggcaataa 143
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcatcggcaataa 107
||||||||||||||||||| |||||||||
Sbjct: 115 gaatcttgatgatgctgcagcggcaataa 143
>41183_aqc-MIR172a:mirbase
Length = 135
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 atgagaatcttgatgatgctgcatc 99
|||||||||||||||||||||||||
Sbjct: 95 atgagaatcttgatgatgctgcatc 119
>40458_gma-MIR172a:mirbase
Length = 159
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 76 tgagaatcttgatgatgctgcatcggcaataaa 108
|||||||||||||||||||||||| || |||||
Sbjct: 118 tgagaatcttgatgatgctgcatcagccataaa 150
>40324_bra-MIR172b:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 atgagaatcttgatgatgctgcatc 99
|||||||||||||||||||||||||
Sbjct: 79 atgagaatcttgatgatgctgcatc 103
>40323_bra-MIR172a:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 atgagaatcttgatgatgctgcatc 99
|||||||||||||||||||||||||
Sbjct: 84 atgagaatcttgatgatgctgcatc 108
>40307_bol-MIR172b:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 atgagaatcttgatgatgctgcatc 99
|||||||||||||||||||||||||
Sbjct: 79 atgagaatcttgatgatgctgcatc 103
>40306_bol-MIR172a:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 atgagaatcttgatgatgctgcatc 99
|||||||||||||||||||||||||
Sbjct: 84 atgagaatcttgatgatgctgcatc 108
>40064_ath-MIR172b:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 atgagaatcttgatgatgctgcatc 99
|||||||||||||||||||||||||
Sbjct: 68 atgagaatcttgatgatgctgcatc 92
>39853_aly-MIR172b:mirbase
Length = 146
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 atgagaatcttgatgatgctgcatc 99
|||||||||||||||||||||||||
Sbjct: 90 atgagaatcttgatgatgctgcatc 114
>42775_zma-MIR172a:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 atgagaatcttgatgatgctgcat 98
||||||||||||||||||||||||
Sbjct: 60 atgagaatcttgatgatgctgcat 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 gcgtggcatcatcaagattcac 42
||||||||||||||||||||||
Sbjct: 1 gcgtggcatcatcaagattcac 22
>42560_sbi-MIR172d:mirbase
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 atgagaatcttgatgatgctgcat 98
||||||||||||||||||||||||
Sbjct: 65 atgagaatcttgatgatgctgcat 88
>41990_osa-MIR172a:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 tgagaatcttgatgatgctgcatc 99
||||||||||||||||||||||||
Sbjct: 77 tgagaatcttgatgatgctgcatc 100
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 ggcgtggcatcatcaagattcac 42
|||||||||||||||||||||||
Sbjct: 10 ggcgtggcatcatcaagattcac 32
>41397_ptc-MIR172c:mirbase
Length = 128
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 tgagaatcttgatgatgctgcatc 99
||||||||||||||||||||||||
Sbjct: 97 tgagaatcttgatgatgctgcatc 120
>41395_ptc-MIR172a:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 tgagaatcttgatgatgctgcatc 99
||||||||||||||||||||||||
Sbjct: 98 tgagaatcttgatgatgctgcatc 121
>40463_gma-MIR172f:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 tgagaatcttgatgatgctgcatc 99
||||||||||||||||||||||||
Sbjct: 107 tgagaatcttgatgatgctgcatc 130
>40462_gma-MIR172e:mirbase
Length = 153
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcatcggcaataaatg 110
||||||||||||||||||| | ||||||||||
Sbjct: 115 gaatcttgatgatgctgcagcagcaataaatg 146
>40460_gma-MIR172c:mirbase
Length = 153
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcatcggcaataaatg 110
||||||||||||||||||| | ||||||||||
Sbjct: 115 gaatcttgatgatgctgcagcagcaataaatg 146
>41991_osa-MIR172b:mirbase
Length = 238
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcatcgg 101
|||||||||||||||||||||||
Sbjct: 209 gaatcttgatgatgctgcatcgg 231
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 cgtggcatcatcaagattcac 42
|||||||||||||||||||||
Sbjct: 12 cgtggcatcatcaagattcac 32
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcatcgg 101
|||||||||||||||||||||||
Sbjct: 205 gaatcttgatgatgctgcatcgg 227
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 gtggcatcatcaagattcac 42
||||||||||||||||||||
Sbjct: 31 gtggcatcatcaagattcac 50
>41543_sly-MIR172b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 76 tgagaatcttgatgatgctgcat 98
|||||||||||||||||||||||
Sbjct: 113 tgagaatcttgatgatgctgcat 135
>41233_csi-MIR172a:mirbase
Length = 162
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 76 tgagaatcttgatgatgctgcatcggc 102
|||||||||||||||||||||| ||||
Sbjct: 113 tgagaatcttgatgatgctgcaacggc 139
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 74 gatgagaatcttgatgatgctgcatcg 100
|||| ||||||||||||||||||||||
Sbjct: 82 gatgggaatcttgatgatgctgcatcg 108
>40065_ath-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 atgagaatcttgatgatgctgca 97
|||||||||||||||||||||||
Sbjct: 95 atgagaatcttgatgatgctgca 117
>39854_aly-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 atgagaatcttgatgatgctgca 97
|||||||||||||||||||||||
Sbjct: 95 atgagaatcttgatgatgctgca 117
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 gcgtggcatcatcaagattcac 42
||||||||||||||||||||||
Sbjct: 1 gcgtggcatcatcaagattcac 22
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcat 98
||||||||||||||||||||
Sbjct: 151 gaatcttgatgatgctgcat 170
>41542_sly-MIR172a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 77 gagaatcttgatgatgctgcat 98
||||||||||||||||||||||
Sbjct: 85 gagaatcttgatgatgctgcat 106
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcatcggcaa 104
||||||||||||||||||||| ||||
Sbjct: 124 gaatcttgatgatgctgcatcagcaa 149
>41050_ghr-MIR172:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 76 tgagaatcttgatgatgctgcatcggcaataaatggct 113
|||||||| ||||||||||||| |||||||| |||||
Sbjct: 88 tgagaatcctgatgatgctgcagtggcaataagtggct 125
>40461_gma-MIR172d:mirbase
Length = 150
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcatcggcaataaa 108
||||||||||||||||||| | ||||||||
Sbjct: 112 gaatcttgatgatgctgcagcagcaataaa 141
>40067_ath-MIR172e:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcatcggcaa 104
||||||||||||||||||||| ||||
Sbjct: 96 gaatcttgatgatgctgcatcagcaa 121
>39856_aly-MIR172e:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcatcggcaa 104
||||||||||||||||||||| ||||
Sbjct: 99 gaatcttgatgatgctgcatcagcaa 124
>40366_rco-MIR172:mirbase
Length = 144
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcatcggca 103
||||||||||||||||||| |||||
Sbjct: 120 gaatcttgatgatgctgcagcggca 144
>42779_zma-MIR172e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 gtggcatcatcaagattcac 42
||||||||||||||||||||
Sbjct: 23 gtggcatcatcaagattcac 42
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 79 gaatcttgatgatgctgcat 98
||||||||||||||||||||
Sbjct: 136 gaatcttgatgatgctgcat 155
