miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41121_tcc-MIR171f:mirbase
          Length = 117

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 71  gggtgttttagtttgattgagccgtgccaatatca 105
           |||||||||| ||||||||||||||||||||||||
Sbjct: 64  gggtgttttaatttgattgagccgtgccaatatca 98



 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 23 gatgttggaatggctcaatcaaatcagatctccc 56
          |||||||||||||||||||||||||| |||||||
Sbjct: 19 gatgttggaatggctcaatcaaatcaaatctccc 52




>41630_vvi-MIR171i:mirbase
          Length = 103

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 23 gatgttggaatggctcaatcaaatcagatctccc 56
          |||||||||||||||||||||||||| |||||||
Sbjct: 13 gatgttggaatggctcaatcaaatcaaatctccc 46



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 84  tgattgagccgtgccaatatcat 106
           |||||||||||||||||||||||
Sbjct: 69  tgattgagccgtgccaatatcat 91




>40363_rco-MIR171e:mirbase
          Length = 84

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 23 gatgttggaatggctcaatcaaatcagatctccc 56
          |||||||||||||||||||||||||| |||||||
Sbjct: 4  gatgttggaatggctcaatcaaatcaaatctccc 37



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tgattgagccgtgccaatatc 104
           |||||||||||||||||||||
Sbjct: 59  tgattgagccgtgccaatatc 79




>42546_sbi-MIR171a:mirbase
          Length = 161

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 81  gtttgattgagccgtgccaatatca 105
           |||||||||||||||||||||||||
Sbjct: 119 gtttgattgagccgtgccaatatca 143




>41625_vvi-MIR171d:mirbase
          Length = 100

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 81  gtttgattgagccgtgccaatatca 105
           |||||||||||||||||||||||||
Sbjct: 64  gtttgattgagccgtgccaatatca 88




>41538_sly-MIR171a:mirbase
          Length = 122

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 76  ttttagtttgattgagccgtgccaatatc 104
           |||| ||||||||||||||||||||||||
Sbjct: 79  ttttcgtttgattgagccgtgccaatatc 107




>41382_ptc-MIR171b:mirbase
          Length = 103

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 81  gtttgattgagccgtgccaatatca 105
           |||||||||||||||||||||||||
Sbjct: 68  gtttgattgagccgtgccaatatca 92




>41381_ptc-MIR171a:mirbase
          Length = 104

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 81  gtttgattgagccgtgccaatatca 105
           |||||||||||||||||||||||||
Sbjct: 69  gtttgattgagccgtgccaatatca 93




>41122_tcc-MIR171g:mirbase
          Length = 115

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 77  tttagtttgattgagccgtgccaatatca 105
           |||||| ||||||||||||||||||||||
Sbjct: 68  tttagtctgattgagccgtgccaatatca 96




>40360_rco-MIR171b:mirbase
          Length = 91

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 81  gtttgattgagccgtgccaatatca 105
           |||||||||||||||||||||||||
Sbjct: 60  gtttgattgagccgtgccaatatca 84




>40318_bra-MIR171a:mirbase
          Length = 85

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 81  gtttgattgagccgtgccaatatca 105
           |||||||||||||||||||||||||
Sbjct: 59  gtttgattgagccgtgccaatatca 83




>40305_bol-MIR171a:mirbase
          Length = 96

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 81  gtttgattgagccgtgccaatatca 105
           |||||||||||||||||||||||||
Sbjct: 65  gtttgattgagccgtgccaatatca 89




>40289_bna-MIR171e:mirbase
          Length = 92

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 81  gtttgattgagccgtgccaatatca 105
           |||||||||||||||||||||||||
Sbjct: 64  gtttgattgagccgtgccaatatca 88




>40288_bna-MIR171d:mirbase
          Length = 96

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 81  gtttgattgagccgtgccaatatca 105
           |||||||||||||||||||||||||
Sbjct: 65  gtttgattgagccgtgccaatatca 89




>39851_aly-MIR171c:mirbase
          Length = 111

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 81  gtttgattgagccgtgccaatatca 105
           |||||||||||||||||||||||||
Sbjct: 71  gtttgattgagccgtgccaatatca 95




>42762_zma-MIR171b:mirbase
          Length = 85

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 82  tttgattgagccgtgccaatatca 105
           ||||||||||||||||||||||||
Sbjct: 60  tttgattgagccgtgccaatatca 83




>42556_sbi-MIR171k:mirbase
          Length = 87

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 82  tttgattgagccgtgccaatatca 105
           ||||||||||||||||||||||||
Sbjct: 60  tttgattgagccgtgccaatatca 83




>41983_osa-MIR171c:mirbase
          Length = 99

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 82  tttgattgagccgtgccaatatca 105
           ||||||||||||||||||||||||
Sbjct: 67  tttgattgagccgtgccaatatca 90




>41982_osa-MIR171b:mirbase
          Length = 100

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 82  tttgattgagccgtgccaatatca 105
           ||||||||||||||||||||||||
Sbjct: 68  tttgattgagccgtgccaatatca 91




>41766_bdi-MIR171c:mirbase
          Length = 86

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 82  tttgattgagccgtgccaatatca 105
           ||||||||||||||||||||||||
Sbjct: 62  tttgattgagccgtgccaatatca 85




>41624_vvi-MIR171c:mirbase
          Length = 103

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 82  tttgattgagccgtgccaatatca 105
           ||||||||||||||||||||||||
Sbjct: 68  tttgattgagccgtgccaatatca 91




>41622_vvi-MIR171a:mirbase
          Length = 99

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 84  tgattgagccgtgccaatatcatg 107
           ||||||||||||||||||||||||
Sbjct: 68  tgattgagccgtgccaatatcatg 91




>41216_crt-MIR171:mirbase
          Length = 201

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 82  tttgattgagccgtgccaatatca 105
           ||||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatatca 182




>41181_aqc-MIR171e:mirbase
          Length = 102

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 81  gtttgattgagccgtgccaatatc 104
           ||||||||||||||||||||||||
Sbjct: 24  gtttgattgagccgtgccaatatc 1




>41177_aqc-MIR171a:mirbase
          Length = 102

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 81  gtttgattgagccgtgccaatatc 104
           ||||||||||||||||||||||||
Sbjct: 77  gtttgattgagccgtgccaatatc 100




>41119_tcc-MIR171d:mirbase
          Length = 117

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 82  tttgattgagccgtgccaatatca 105
           ||||||||||||||||||||||||
Sbjct: 75  tttgattgagccgtgccaatatca 98




>40701_mtr-MIR171g:mirbase
          Length = 105

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 81  gtttgattgagccgtgccaatatc 104
           ||||||||||||||||||||||||
Sbjct: 77  gtttgattgagccgtgccaatatc 100




>40700_mtr-MIR171f:mirbase
          Length = 95

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 82  tttgattgagccgtgccaatatca 105
           ||||||||||||||||||||||||
Sbjct: 65  tttgattgagccgtgccaatatca 88




>40698_mtr-MIR171d:mirbase
          Length = 105

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 81  gtttgattgagccgtgccaatatc 104
           ||||||||||||||||||||||||
Sbjct: 77  gtttgattgagccgtgccaatatc 100




>40457_gma-MIR171c:mirbase
          Length = 104

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 82  tttgattgagccgtgccaatatca 105
           ||||||||||||||||||||||||
Sbjct: 70  tttgattgagccgtgccaatatca 93




>40359_rco-MIR171a:mirbase
          Length = 92

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 82  tttgattgagccgtgccaatatca 105
           ||||||||||||||||||||||||
Sbjct: 62  tttgattgagccgtgccaatatca 85




>40062_ath-MIR171c:mirbase
          Length = 116

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 82  tttgattgagccgtgccaatatca 105
           ||||||||||||||||||||||||
Sbjct: 85  tttgattgagccgtgccaatatca 108




>42769_zma-MIR171i:mirbase
          Length = 104

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 83  ttgattgagccgtgccaatatca 105
           |||||||||||||||||||||||
Sbjct: 64  ttgattgagccgtgccaatatca 86




>42766_zma-MIR171f:mirbase
          Length = 155

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 83  ttgattgagccgtgccaatatca 105
           |||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatca 136




>41389_ptc-MIR171i:mirbase
          Length = 129

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 82  tttgattgagccgtgccaatatc 104
           |||||||||||||||||||||||
Sbjct: 98  tttgattgagccgtgccaatatc 120




>41387_ptc-MIR171g:mirbase
          Length = 100

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 71  gggtgttttagtttgattgagccgtgccaatatca 105
           |||| ||||| | ||||||||||||||||||||||
Sbjct: 58  gggtcttttaatctgattgagccgtgccaatatca 92




>41180_aqc-MIR171d:mirbase
          Length = 106

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 82  tttgattgagccgtgccaatatc 104
           |||||||||||||||||||||||
Sbjct: 82  tttgattgagccgtgccaatatc 104




>41120_tcc-MIR171e:mirbase
          Length = 161

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 82  tttgattgagccgtgccaatatc 104
           |||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatatc 141




>40364_rco-MIR171f:mirbase
          Length = 111

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 82  tttgattgagccgtgccaatatc 104
           |||||||||||||||||||||||
Sbjct: 84  tttgattgagccgtgccaatatc 106




>40362_rco-MIR171d:mirbase
          Length = 124

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 82  tttgattgagccgtgccaatatc 104
           |||||||||||||||||||||||
Sbjct: 97  tttgattgagccgtgccaatatc 119




>42770_zma-MIR171j:mirbase
          Length = 129

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  tgattgagccgtgccaatatca 105
           ||||||||||||||||||||||
Sbjct: 90  tgattgagccgtgccaatatca 111




>42547_sbi-MIR171b:mirbase
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  tgattgagccgtgccaatatca 105
           ||||||||||||||||||||||
Sbjct: 93  tgattgagccgtgccaatatca 114




>41986_osa-MIR171f:mirbase
          Length = 127

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  tgattgagccgtgccaatatca 105
           ||||||||||||||||||||||
Sbjct: 97  tgattgagccgtgccaatatca 118




>41388_ptc-MIR171h:mirbase
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 23 gatgttggaatggctcaatcaaatcagatctccc 56
          |||||||| |||||||||||| |||| |||||||
Sbjct: 11 gatgttgggatggctcaatcatatcaaatctccc 44



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  tgattgagccgtgccaatatca 105
           ||||||||||||||||||||||
Sbjct: 71  tgattgagccgtgccaatatca 92




>41178_aqc-MIR171b:mirbase
          Length = 77

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 25 tgttggaatggctcaatcaaat 46
          ||||||||||||||||||||||
Sbjct: 3  tgttggaatggctcaatcaaat 24



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  tgattgagccgtgccaatatca 105
           ||||||||||||||||||||||
Sbjct: 55  tgattgagccgtgccaatatca 76




>41123_tcc-MIR171h:mirbase
          Length = 135

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 75  gttttagtttgattgagccgtgccaatatc 104
           ||||| || |||||||||||||||||||||
Sbjct: 86  gttttggtctgattgagccgtgccaatatc 115




>40697_mtr-MIR171c:mirbase
          Length = 105

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  tttgattgagccgtgccaatat 103
           ||||||||||||||||||||||
Sbjct: 78  tttgattgagccgtgccaatat 99




>40695_mtr-MIR171:mirbase
          Length = 114

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 77  tttagtttgattgagccgtgccaatatcat 106
           |||||| |||||||| ||||||||||||||
Sbjct: 68  tttagtctgattgagtcgtgccaatatcat 97




>40454_gma-MIR171a:mirbase
          Length = 102

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 86  attgagccgtgccaatatcatgaactactg 115
           |||||||||||||||||||| |||| ||||
Sbjct: 70  attgagccgtgccaatatcacgaaccactg 99




>42765_zma-MIR171e:mirbase
          Length = 126

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tgattgagccgtgccaatatc 104
           |||||||||||||||||||||
Sbjct: 87  tgattgagccgtgccaatatc 107




>42764_zma-MIR171d:mirbase
          Length = 121

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tgattgagccgtgccaatatc 104
           |||||||||||||||||||||
Sbjct: 82  tgattgagccgtgccaatatc 102




>42641_tae-MIR171b:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 85  gattgagccgtgccaatatca 105
           |||||||||||||||||||||
Sbjct: 90  gattgagccgtgccaatatca 110




>42640_tae-MIR171a:mirbase
          Length = 130

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tgattgagccgtgccaatatc 104
           |||||||||||||||||||||
Sbjct: 89  tgattgagccgtgccaatatc 109




>42554_sbi-MIR171i:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tgattgagccgtgccaatatc 104
           |||||||||||||||||||||
Sbjct: 68  tgattgagccgtgccaatatc 88




>42549_sbi-MIR171d:mirbase
          Length = 153

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tgattgagccgtgccaatatc 104
           |||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134




>41985_osa-MIR171e:mirbase
          Length = 119

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tgattgagccgtgccaatatc 104
           |||||||||||||||||||||
Sbjct: 89  tgattgagccgtgccaatatc 109




>41984_osa-MIR171d:mirbase
          Length = 135

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tgattgagccgtgccaatatc 104
           |||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125




>41890_hvu-MIR171:mirbase
          Length = 173

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tgattgagccgtgccaatatc 104
           |||||||||||||||||||||
Sbjct: 112 tgattgagccgtgccaatatc 132




>41874_far-MIR171:mirbase
          Length = 130

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tgattgagccgtgccaatatc 104
           |||||||||||||||||||||
Sbjct: 90  tgattgagccgtgccaatatc 110




>41765_bdi-MIR171b:mirbase
          Length = 164

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tgattgagccgtgccaatatc 104
           |||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatatc 134




>41386_ptc-MIR171f:mirbase
          Length = 130

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tgattgagccgtgccaatatc 104
           |||||||||||||||||||||
Sbjct: 101 tgattgagccgtgccaatatc 121




>41385_ptc-MIR171e:mirbase
          Length = 94

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tgattgagccgtgccaatatc 104
           |||||||||||||||||||||
Sbjct: 65  tgattgagccgtgccaatatc 85




>40361_rco-MIR171c:mirbase
          Length = 87

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  tgattgagccgtgccaatatc 104
           |||||||||||||||||||||
Sbjct: 62  tgattgagccgtgccaatatc 82




>40321_bra-MIR171d:mirbase
          Length = 101

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 85  gattgagccgtgccaatatca 105
           |||||||||||||||||||||
Sbjct: 71  gattgagccgtgccaatatca 91