miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42148_osa-MIR812k:mirbase
Length = 226
Score = 170 bits (86), Expect = 4e-43
Identities = 126/138 (91%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct: 138 cataagtcacaagtaaagtactattcatgttttatcatctcataacaacaaaaatgctaa 79
Query: 171 ttataa-aaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgc 229
|||||| ||||||||||||||||| |||||||||| ||| ||||||||||| ||||||||
Sbjct: 78 ttataaaaaaatttcaaataagacggacgatcaaaattgagcgcggaaactcatggctgc 19
Query: 230 atttattttggaacggag 247
| ||||| || |||||||
Sbjct: 18 acttattatgaaacggag 1
>42150_osa-MIR812m:mirbase
Length = 188
Score = 143 bits (72), Expect = 8e-35
Identities = 107/116 (92%), Gaps = 2/116 (1%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaa-tgcta 169
|||||||||||||||||||||||||||| |||||| |||| ||| ||| ||||| | |||
Sbjct: 119 cataagtcacgagtaaagtactattcatattttattatctcataacaacaaaaaatacta 60
Query: 170 attataaaaaa-tttcaaataagacagacgatcaaagttgggcgcggaaacttatg 224
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 59 attataaaaaaatttcaaataagacggacgatcaaagttgggcgcggaaacttatg 4
Score = 40.1 bits (20), Expect = 9e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 47 atagttttccgtgtctaattttgaccattcgtcttattta 86
||||||||||| ||| || ||| ||| |||||||||||||
Sbjct: 184 atagttttccgcgtccaactttaaccgttcgtcttattta 145
>42147_osa-MIR812j:mirbase
Length = 297
Score = 109 bits (55), Expect = 1e-24
Identities = 110/127 (86%), Gaps = 1/127 (0%)
Strand = Plus / Plus
Query: 114 aagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
|||||||| |||| ||||||||||||||||| |||| ||| ||| |||||| ||||| |
Sbjct: 124 aagtcacgcataaactactattcatgttttataatctaataacaataaaaatactaatca 183
Query: 174 ta-aaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgcatt 232
|| |||||||||||||||||| || ||| |||||||| | |||||||| |||||||| ||
Sbjct: 184 tacaaaaatttcaaataagacggatgattaaagttggacacggaaactcatggctgcgtt 243
Query: 233 tattttg 239
|||||||
Sbjct: 244 tattttg 250
>42152_osa-MIR812n:mirbase
Length = 203
Score = 105 bits (53), Expect = 2e-23
Identities = 106/121 (87%), Gaps = 2/121 (1%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| ||||||||||||||||||||||||||| ||| ||| | |||| ||||
Sbjct: 126 cataagtcacacataaagtactattcatgttttatcatctaataacaatagaaatactaa 67
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgc 229
| || ||||||||||||||||||| ||||| |||||||||| |||||||| ||||||||
Sbjct: 66 tcataaaaaaatttcaaataagacgaacgat-aaagttgggcacggaaactcatggctgc 8
Query: 230 a 230
|
Sbjct: 7 a 7
Score = 71.9 bits (36), Expect = 2e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgca 230
|||||| ||||||||| |||||||||||||||||||| |||||| | |||||||||
Sbjct: 142 aaaaaaattcaaataacacagacgatcaaagttgggcacggaaaatcatggctgca 197
>42151_osa-MIR812n:mirbase
Length = 203
Score = 105 bits (53), Expect = 2e-23
Identities = 106/121 (87%), Gaps = 2/121 (1%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| ||||||||||||||||||||||||||| ||| ||| | |||| ||||
Sbjct: 126 cataagtcacacataaagtactattcatgttttatcatctaataacaatagaaatactaa 67
Query: 171 ttat-aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgc 229
| || ||||||||||||||||||| ||||| |||||||||| |||||||| ||||||||
Sbjct: 66 tcataaaaaaatttcaaataagacgaacgat-aaagttgggcacggaaactcatggctgc 8
Query: 230 a 230
|
Sbjct: 7 a 7
Score = 71.9 bits (36), Expect = 2e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 175 aaaaaatttcaaataagacagacgatcaaagttgggcgcggaaacttatggctgca 230
|||||| ||||||||| |||||||||||||||||||| |||||| | |||||||||
Sbjct: 142 aaaaaaattcaaataacacagacgatcaaagttgggcacggaaaatcatggctgca 197
>42149_osa-MIR812l:mirbase
Length = 242
Score = 91.7 bits (46), Expect = 3e-19
Identities = 82/94 (87%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
||||||||||| ||||| |||||| ||||||||||||||||||| ||| |||||| |||
Sbjct: 145 cataagtcacgcgtaaaatactatgcatgttttatcatcttataacaacaaaaatattaa 86
Query: 171 ttataaaaaatttcaaataagacagacgatcaaa 204
||| |||||| || ||||||||| |||||||||
Sbjct: 85 ttacaaaaaaattaaaataagacgaacgatcaaa 52
Score = 48.1 bits (24), Expect = 4e-06
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 36 taagtgcagccatagttttccgtgtctaattttgaccattcgtcttatttaa 87
|||||||| ||||| ||||||| ||| || ||| ||| ||||||||||||||
Sbjct: 221 taagtgcatccataattttccgcgtccaactttaaccgttcgtcttatttaa 170
>42144_osa-MIR812g:mirbase
Length = 242
Score = 83.8 bits (42), Expect = 6e-17
Identities = 87/101 (86%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 111 cataagtcacgagtaaagta--ctattcatgttttatcatcttatatcaagaaaaatgct 168
||||||||| |||||||||| |||||||| |||||| |||| ||| ||| |||||| ||
Sbjct: 93 cataagtcatgagtaaagtatactattcatattttattatctcataacaataaaaatact 152
Query: 169 aattataaaaaatttcaaataagacagacgatcaaagttgg 209
|||||||||||| || ||||||||| || ||| ||||||||
Sbjct: 153 aattataaaaaaatttaaataagacggatgattaaagttgg 193
>42143_osa-MIR812f:mirbase
Length = 179
Score = 73.8 bits (37), Expect = 6e-14
Identities = 82/97 (84%)
Strand = Plus / Minus
Query: 111 cataagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaa 170
|||||||||| |||||||||||| |||||||| |||| ||| ||| |||||| |||
Sbjct: 113 cataagtcacacataaagtactatttgtgttttataatctaataacaataaaaatattaa 54
Query: 171 ttataaaaaatttcaaataagacagacgatcaaagtt 207
| ||||||||||| |||||| || |||||||||||||
Sbjct: 53 tcataaaaaatttaaaataaaacggacgatcaaagtt 17
>42139_osa-MIR812b:mirbase
Length = 170
Score = 73.8 bits (37), Expect = 6e-14
Identities = 74/85 (87%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 115 agtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta- 173
||||||| ||||||| ||||||||||||||||||| ||| ||| |||||| ||||| |
Sbjct: 64 agtcacgcataaagtaatattcatgttttatcatctaataacaataaaaatactaatcat 123
Query: 174 taaaaaatttcaaataagacagacg 198
|||||| ||||||||||||| ||||
Sbjct: 124 taaaaattttcaaataagacggacg 148
>42138_osa-MIR812a:mirbase
Length = 234
Score = 67.9 bits (34), Expect = 4e-12
Identities = 71/82 (86%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 124 taaagtactattcatgttttatcatcttatatcaagaaaaatgctaattataaaaaa-tt 182
|||| |||||||||||||||||||| | ||| ||| |||||| |||| |||||||| ||
Sbjct: 129 taaaatactattcatgttttatcatgtaataacaataaaaatagtaatcataaaaaattt 70
Query: 183 tcaaataagacagacgatcaaa 204
||||||||||| |||||||||
Sbjct: 69 tcaaataagacgaacgatcaaa 48
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 ctccgtcccaaaataagtgcag 44
||||||||||||||||||||||
Sbjct: 3 ctccgtcccaaaataagtgcag 24
>42142_osa-MIR812e:mirbase
Length = 170
Score = 61.9 bits (31), Expect = 2e-10
Identities = 83/99 (83%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 113 taagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatt 172
||||||||| | ||||| |||| || ||||||||||| ||| ||| |||||| ||||
Sbjct: 106 taagtcacgcatgaagtaatatttatattttatcatctaataacaataaaaatagtaata 47
Query: 173 ataaaaaatttcaaataagacagacgatcaaagttgggc 211
| ||||| ||||||||||||| |||| ||||||||||||
Sbjct: 46 a-aaaaattttcaaataagacggacggtcaaagttgggc 9
>42141_osa-MIR812d:mirbase
Length = 153
Score = 54.0 bits (27), Expect = 6e-08
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 114 aagtcacgagtaaagtactattcatgttttatcatcttatatcaagaaaaatgctaatta 173
|||||||| ||||||| ||||||||||||||||| | | | ||| |||||| ||||| |
Sbjct: 53 aagtcacgcataaagtattattcatgttttatcatataagaacaataaaaatactaatca 112
Query: 174 taaaaaa 180
|||||||
Sbjct: 113 taaaaaa 119
>42146_osa-MIR812i:mirbase
Length = 242
Score = 52.0 bits (26), Expect = 2e-07
Identities = 45/50 (90%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 160 aaaaatgctaattataaaaaa-tttcaaataagacagacgatcaaagttg 208
|||||| ||||| |||||||| |||||||||||||||| |||| ||||||
Sbjct: 98 aaaaatactaatcataaaaaagtttcaaataagacagatgatctaagttg 49
>42145_osa-MIR812h:mirbase
Length = 187
Score = 50.1 bits (25), Expect = 9e-07
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 140 ttttatcatcttatatcaagaaaaatgctaattataaaaaatttcaaataagacagacga 199
|||||| |||| ||| ||| |||||| ||| ||||||||| || ||||||| ||||| ||
Sbjct: 113 ttttataatctcataacaataaaaatactatttataaaaagtt-caaataaaacagatga 55
Query: 200 tcaaagttgggcg 212
| |||||||||||
Sbjct: 54 ttaaagttgggcg 42
>42154_osa-MIR812o:mirbase
Length = 173
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 124 taaagtactattcatgttttatcatct 150
||||||| |||||||||||||||||||
Sbjct: 97 taaagtattattcatgttttatcatct 71
>42153_osa-MIR812o:mirbase
Length = 173
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 124 taaagtactattcatgttttatcatct 150
||||||| |||||||||||||||||||
Sbjct: 97 taaagtattattcatgttttatcatct 71
