miRNEST 2.0, an integrative microRNA resource :: BLAST
>41463_ptc-MIR408:mirbase
Length = 105
Score = 54.0 bits (27), Expect = 3e-08
Identities = 70/82 (85%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 34 gggaacagacagagcatggatagagcttacttacagaaacccttttgttttgacccttcc 93
|||||||| |||||||||||| ||||| ||| |||||| ||| |||||| | || ||
Sbjct: 18 gggaacaggcagagcatggatggagct-actaacagaagtactt--gttttggctctacc 74
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 75 catgcactgcctcttccctggc 96
>41252_csi-MIR408:mirbase
Length = 153
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 91 tcccatgcactgcctcttccctggc 115
|||||||||||||||||||||||||
Sbjct: 116 tcccatgcactgcctcttccctggc 140
>40108_ath-MIR408:mirbase
Length = 218
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 79 tgttttgacccttcccatgcactgcctcttccctggc 115
||||||| | || ||||||||||||||||||||||||
Sbjct: 104 tgttttgtctctacccatgcactgcctcttccctggc 140
>39897_aly-MIR408:mirbase
Length = 211
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 79 tgttttgacccttcccatgcactgcctcttccctggc 115
||||||| | || ||||||||||||||||||||||||
Sbjct: 101 tgttttgtctctacccatgcactgcctcttccctggc 137
>41683_vvi-MIR408:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 92 cccatgcactgcctcttccctggc 115
||||||||||||||||||||||||
Sbjct: 74 cccatgcactgcctcttccctggc 97
>41193_aqc-MIR408:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 93 ccatgcactgcctcttccctggc 115
|||||||||||||||||||||||
Sbjct: 24 ccatgcactgcctcttccctggc 2
>40405_ahy-MIR408:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggc 101
>40404_ahy-MIR408:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggc 101
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 catgcactgcctcttccctggc 115
||||||||||||||||||||||
Sbjct: 92 catgcactgcctcttccctggc 113
>42830_zma-MIR408b:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 91 tcccatgcactgcctcttccctggc 115
|||| ||||||||||||||||||||
Sbjct: 121 tcccctgcactgcctcttccctggc 145
>42829_zma-MIR408:mirbase
Length = 191
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 91 tcccatgcactgcctcttccctggc 115
|||| ||||||||||||||||||||
Sbjct: 148 tcccctgcactgcctcttccctggc 172
>42600_sbi-MIR408:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 91 tcccatgcactgcctcttccctggc 115
|||| ||||||||||||||||||||
Sbjct: 180 tcccctgcactgcctcttccctggc 204
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 91 tcccatgcactgcctcttccctggc 115
|||| ||||||||||||||||||||
Sbjct: 222 tcccctgcactgcctcttccctggc 246
>42464_sof-MIR408c:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 91 tcccatgcactgcctcttccctggc 115
|||| ||||||||||||||||||||
Sbjct: 243 tcccctgcactgcctcttccctggc 267
>42463_sof-MIR408b:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 91 tcccatgcactgcctcttccctggc 115
|||| ||||||||||||||||||||
Sbjct: 243 tcccctgcactgcctcttccctggc 267
>42462_sof-MIR408a:mirbase
Length = 283
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 91 tcccatgcactgcctcttccctggc 115
|||| ||||||||||||||||||||
Sbjct: 240 tcccctgcactgcctcttccctggc 264
>42052_osa-MIR408:mirbase
Length = 213
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 91 tcccatgcactgcctcttccctggc 115
|||| ||||||||||||||||||||
Sbjct: 149 tcccctgcactgcctcttccctggc 173
>40391_rco-MIR408:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 79 tgttttgacccttcccatgcactgcctcttccctggc 115
||||||| | || ||| ||||||||||||||||||||
Sbjct: 51 tgttttggctctacccctgcactgcctcttccctggc 87
>39742_smo-MIR408:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 95 atgcactgcctcttccctggc 115
|||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggc 96
>39428_pta-MIR408:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 95 atgcactgcctcttccctggc 115
|||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggc 84
>42647_tae-MIR408:mirbase
Length = 187
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 96 tgcactgcctcttccctggc 115
||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggc 156
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 96 tgcactgcctcttccctggc 115
||||||||||||||||||||
Sbjct: 159 tgcactgcctcttccctggc 178
>42465_sof-MIR408d:mirbase
Length = 215
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 96 tgcactgcctcttccctggc 115
||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggc 196