miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42467_ssp-MIR156:mirbase
          Length = 543

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 40/43 (93%), Gaps = 1/43 (2%)
 Strand = Plus / Plus

                                                      
Query: 68  ggagctatgcgtgctcactgctctatctgtcagccactgatca 110
           |||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 357 ggagctgtgcgtgctcact-ctctatctgtcagccactcatca 398



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 70  agctatgcgtgctcactgctctatctgtcagcc 102
           ||||||||||||||||| |||| ||||||||||
Sbjct: 73  agctatgcgtgctcacttctctctctgtcagcc 105



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 13 tgacagaagagagtgagcacccatggtg 40
          |||||||||||||||||||| |||||||
Sbjct: 5  tgacagaagagagtgagcacacatggtg 32



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 12  ttgacagaagagagtgagcac 32
           |||||||||||||||||||||
Sbjct: 303 ttgacagaagagagtgagcac 323




>40650_mtr-MIR156c:mirbase
          Length = 98

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 13 tgacagaagagagtgagcacccatggtgttt 43
          |||||||||||||||||||| ||||||||||
Sbjct: 6  tgacagaagagagtgagcacacatggtgttt 36




>42686_zma-MIR156i:mirbase
          Length = 117

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 76  gcgtgctcactgctctatctgtcagccact 105
           |||||||||||||||||||||||| |||||
Sbjct: 76  gcgtgctcactgctctatctgtcatccact 105



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 13 tgacagaagagagtgagcac 32
          ||||||||||||||||||||
Sbjct: 13 tgacagaagagagtgagcac 32




>40004_ath-MIR156c:mirbase
          Length = 104

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 75  tgcgtgctcactgctctatctgtcag 100
           ||||||||||||||||||||||||||
Sbjct: 70  tgcgtgctcactgctctatctgtcag 95



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 13 tgacagaagagagtgagcac 32
          ||||||||||||||||||||
Sbjct: 12 tgacagaagagagtgagcac 31




>39792_aly-MIR156c:mirbase
          Length = 102

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 75  tgcgtgctcactgctctatctgtcag 100
           ||||||||||||||||||||||||||
Sbjct: 69  tgcgtgctcactgctctatctgtcag 94



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 13 tgacagaagagagtgagcac 32
          ||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcac 30




>42451_sof-MIR156:mirbase
          Length = 137

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 70  agctatgcgtgctcactgctctatctgtcagcc 102
           ||||||||||||||||| |||| ||||||||||
Sbjct: 89  agctatgcgtgctcacttctctctctgtcagcc 121



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 13 tgacagaagagagtgagcacccatggtg 40
          |||||||||||||||||||| |||||||
Sbjct: 21 tgacagaagagagtgagcacacatggtg 48




>40005_ath-MIR156d:mirbase
          Length = 118

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 8  gaagttgacagaagagagtgagcac 32
          |||||||||||||||||||||||||
Sbjct: 13 gaagttgacagaagagagtgagcac 37




>39793_aly-MIR156d:mirbase
          Length = 118

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 8  gaagttgacagaagagagtgagcac 32
          |||||||||||||||||||||||||
Sbjct: 12 gaagttgacagaagagagtgagcac 36




>42689_zma-MIR156l:mirbase
          Length = 90

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 76 gcgtgctcactgctctatctgtca 99
          ||||||||||||||||||||||||
Sbjct: 64 gcgtgctcactgctctatctgtca 87



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 13 tgacagaagagagtgagcac 32
          ||||||||||||||||||||
Sbjct: 2  tgacagaagagagtgagcac 21




>42680_zma-MIR156c:mirbase
          Length = 139

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 13 tgacagaagagagtgagcacccatggtg 40
          |||||||||||||||||||| |||||||
Sbjct: 21 tgacagaagagagtgagcacacatggtg 48



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 70  agctatgcgtgctcactgctctatctgtcagcca 103
           ||||||||||||||||| |||| | |||||||||
Sbjct: 90  agctatgcgtgctcacttctctctttgtcagcca 123




>42491_sbi-MIR156g:mirbase
          Length = 89

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 76 gcgtgctcactgctctatctgtca 99
          ||||||||||||||||||||||||
Sbjct: 63 gcgtgctcactgctctatctgtca 86



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 13 tgacagaagagagtgagcac 32
          ||||||||||||||||||||
Sbjct: 2  tgacagaagagagtgagcac 21




>42487_sbi-MIR156c:mirbase
          Length = 95

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 13 tgacagaagagagtgagcacccatggtg 40
          |||||||||||||||||||| |||||||
Sbjct: 1  tgacagaagagagtgagcacacatggtg 28



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 70 agctatgcgtgctcactgctctatctgtca 99
          ||||||||||||||||| |||| |||||||
Sbjct: 66 agctatgcgtgctcacttctctctctgtca 95




>41906_osa-MIR156c:mirbase
          Length = 149

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 13 tgacagaagagagtgagcacccatggtg 40
          |||||||||||||||||||| |||||||
Sbjct: 29 tgacagaagagagtgagcacacatggtg 56



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 70  agctatgcgtgctcactgctctatctgtcagcca 103
           ||||||| ||||||||| |||| |||||||||||
Sbjct: 90  agctatgtgtgctcacttctctctctgtcagcca 123




>40007_ath-MIR156f:mirbase
          Length = 132

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 13 tgacagaagagagtgagcacccatggtg 40
          |||||||||||||||||||| |||||||
Sbjct: 21 tgacagaagagagtgagcacacatggtg 48




>40006_ath-MIR156e:mirbase
          Length = 107

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 13 tgacagaagagagtgagcacccatggtg 40
          |||||||||||||||||||| |||||||
Sbjct: 7  tgacagaagagagtgagcacacatggtg 34




>39795_aly-MIR156f:mirbase
          Length = 228

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 13 tgacagaagagagtgagcacccatggtg 40
          |||||||||||||||||||| |||||||
Sbjct: 68 tgacagaagagagtgagcacacatggtg 95




>39794_aly-MIR156e:mirbase
          Length = 150

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 13 tgacagaagagagtgagcacccatggtg 40
          |||||||||||||||||||| |||||||
Sbjct: 26 tgacagaagagagtgagcacacatggtg 53




>41909_osa-MIR156f:mirbase
          Length = 186

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 agttgacagaagagagtgagcac 32
          |||||||||||||||||||||||
Sbjct: 1  agttgacagaagagagtgagcac 23




>41905_osa-MIR156b:mirbase
          Length = 176

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 33/35 (94%), Gaps = 1/35 (2%)
 Strand = Plus / Plus

                                              
Query: 68  ggagctatgcgtgctcactgctctatctgtcagcc 102
           |||||| |||||||||||| |||||||||||||||
Sbjct: 98  ggagctgtgcgtgctcact-ctctatctgtcagcc 131




>41563_vvi-MIR156c:mirbase
          Length = 104

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 13 tgacagaagagagtgagcacccatggt 39
          |||||||||||||||||||| ||||||
Sbjct: 11 tgacagaagagagtgagcacacatggt 37




>41291_ptc-MIR156d:mirbase
          Length = 101

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 agttgacagaagagagtgagcac 32
          |||||||||||||||||||||||
Sbjct: 8  agttgacagaagagagtgagcac 30




>40649_mtr-MIR156b:mirbase
          Length = 95

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 13 tgacagaagagagtgagcacccatggt 39
          |||||||||||||||||||| ||||||
Sbjct: 6  tgacagaagagagtgagcacacatggt 32




>40425_gma-MIR156a:mirbase
          Length = 122

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 75  tgcgtgctcactgctctatctgtcagc 101
           |||||||||||| ||||||||||||||
Sbjct: 79  tgcgtgctcacttctctatctgtcagc 105



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 13 tgacagaagagagtgagcac 32
          ||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcac 40




>40332_rco-MIR156c:mirbase
          Length = 94

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 13 tgacagaagagagtgagcacccatggt 39
          |||||||||||||||||||| ||||||
Sbjct: 6  tgacagaagagagtgagcacacatggt 32




>40330_rco-MIR156a:mirbase
          Length = 97

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 13 tgacagaagagagtgagcacccatggt 39
          |||||||||||||||||||| ||||||
Sbjct: 6  tgacagaagagagtgagcacacatggt 32




>41913_osa-MIR156j:mirbase
          Length = 165

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 gttgacagaagagagtgagcac 32
          ||||||||||||||||||||||
Sbjct: 40 gttgacagaagagagtgagcac 61




>41911_osa-MIR156h:mirbase
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 gttgacagaagagagtgagcac 32
          ||||||||||||||||||||||
Sbjct: 7  gttgacagaagagagtgagcac 28




>41083_tcc-MIR156d:mirbase
          Length = 125

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 7  ggaagttgacagaagagagtgagcac 32
          ||||| ||||||||||||||||||||
Sbjct: 15 ggaaggtgacagaagagagtgagcac 40




>40258_bna-MIR156a:mirbase
          Length = 82

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 75  tgcgtgctcactgctctatctgtcag 100
           ||||||||||||||||| ||||||||
Sbjct: 57  tgcgtgctcactgctctttctgtcag 82



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 13 tgacagaagagagtgagcac 32
          ||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcac 20




>40002_ath-MIR156a:mirbase
          Length = 123

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 75  tgcgtgctcactgctctatctgtcag 100
           ||||||||||||||||| ||||||||
Sbjct: 78  tgcgtgctcactgctctttctgtcag 103



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 13 tgacagaagagagtgagcac 32
          ||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcac 40




>39790_aly-MIR156a:mirbase
          Length = 184

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 75  tgcgtgctcactgctctatctgtcag 100
           ||||||||||||||||| ||||||||
Sbjct: 106 tgcgtgctcactgctctttctgtcag 131



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 13 tgacagaagagagtgagcac 32
          ||||||||||||||||||||
Sbjct: 49 tgacagaagagagtgagcac 68




>42681_zma-MIR156d:mirbase
          Length = 119

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 ttgacagaagagagtgagcac 32
          |||||||||||||||||||||
Sbjct: 15 ttgacagaagagagtgagcac 35




>42679_zma-MIR156b:mirbase
          Length = 124

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 ttgacagaagagagtgagcac 32
          |||||||||||||||||||||
Sbjct: 20 ttgacagaagagagtgagcac 40




>41907_osa-MIR156d:mirbase
          Length = 129

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 ttgacagaagagagtgagcac 32
          |||||||||||||||||||||
Sbjct: 19 ttgacagaagagagtgagcac 39




>41904_osa-MIR156a:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                           
Query: 67 tggagctatgcgtgctcactgctctatctgtca 99
          |||||||| ||||||||||| |||| |||||||
Sbjct: 63 tggagctacgcgtgctcacttctctctctgtca 95



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 13 tgacagaagagagtgagcac 32
          ||||||||||||||||||||
Sbjct: 7  tgacagaagagagtgagcac 26




>41728_bdi-MIR156c:mirbase
          Length = 146

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 ttgacagaagagagtgagcac 32
          |||||||||||||||||||||
Sbjct: 31 ttgacagaagagagtgagcac 51




>41292_ptc-MIR156e:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 ttgacagaagagagtgagcac 32
          |||||||||||||||||||||
Sbjct: 10 ttgacagaagagagtgagcac 30




>41086_tcc-MIR156g:mirbase
          Length = 120

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 ttgacagaagagagtgagcac 32
          |||||||||||||||||||||
Sbjct: 20 ttgacagaagagagtgagcac 40




>41045_ghr-MIR156d:mirbase
          Length = 96

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 ttgacagaagagagtgagcac 32
          |||||||||||||||||||||
Sbjct: 8  ttgacagaagagagtgagcac 28




>40656_mtr-MIR156i:mirbase
          Length = 93

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 ttgacagaagagagtgagcac 32
          |||||||||||||||||||||
Sbjct: 5  ttgacagaagagagtgagcac 25




>40651_mtr-MIR156d:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 ttgacagaagagagtgagcac 32
          |||||||||||||||||||||
Sbjct: 5  ttgacagaagagagtgagcac 25




>40331_rco-MIR156b:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 ttgacagaagagagtgagcac 32
          |||||||||||||||||||||
Sbjct: 5  ttgacagaagagagtgagcac 25




>40008_ath-MIR156g:mirbase
          Length = 103

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 14 gacagaagagagtgagcacccatgg 38
          ||||||||||||||||||| |||||
Sbjct: 12 gacagaagagagtgagcacacatgg 36




>39796_aly-MIR156g:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 14 gacagaagagagtgagcacccatgg 38
          ||||||||||||||||||| |||||
Sbjct: 33 gacagaagagagtgagcacacatgg 57




>42685_zma-MIR156h:mirbase
          Length = 115

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 13 tgacagaagagagtgagcac 32
          ||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcac 39



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 76 gcgtgctcactgctctatctgtca 99
          |||||||||||||||| |||||||
Sbjct: 74 gcgtgctcactgctctttctgtca 97




>42684_zma-MIR156g:mirbase
          Length = 121

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 13 tgacagaagagagtgagcac 32
          ||||||||||||||||||||
Sbjct: 4  tgacagaagagagtgagcac 23




>42683_zma-MIR156f:mirbase
          Length = 167

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 13 tgacagaagagagtgagcac 32
          ||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcac 40




>42682_zma-MIR156e:mirbase
          Length = 126

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 13 tgacagaagagagtgagcac 32
          ||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcac 39



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 76  gcgtgctcactgctctatctgtca 99
           |||||||||||||||| |||||||
Sbjct: 83  gcgtgctcactgctctctctgtca 106