miRNEST 2.0, an integrative microRNA resource :: BLAST
>42467_ssp-MIR156:mirbase
Length = 543
Score = 54.0 bits (27), Expect = 2e-08
Identities = 40/43 (93%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 68 ggagctatgcgtgctcactgctctatctgtcagccactgatca 110
|||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 357 ggagctgtgcgtgctcact-ctctatctgtcagccactcatca 398
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 70 agctatgcgtgctcactgctctatctgtcagcc 102
||||||||||||||||| |||| ||||||||||
Sbjct: 73 agctatgcgtgctcacttctctctctgtcagcc 105
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacccatggtg 40
|||||||||||||||||||| |||||||
Sbjct: 5 tgacagaagagagtgagcacacatggtg 32
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttgacagaagagagtgagcac 32
|||||||||||||||||||||
Sbjct: 303 ttgacagaagagagtgagcac 323
>40650_mtr-MIR156c:mirbase
Length = 98
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacccatggtgttt 43
|||||||||||||||||||| ||||||||||
Sbjct: 6 tgacagaagagagtgagcacacatggtgttt 36
>42686_zma-MIR156i:mirbase
Length = 117
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 76 gcgtgctcactgctctatctgtcagccact 105
|||||||||||||||||||||||| |||||
Sbjct: 76 gcgtgctcactgctctatctgtcatccact 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcac 32
||||||||||||||||||||
Sbjct: 13 tgacagaagagagtgagcac 32
>40004_ath-MIR156c:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 tgcgtgctcactgctctatctgtcag 100
||||||||||||||||||||||||||
Sbjct: 70 tgcgtgctcactgctctatctgtcag 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcac 32
||||||||||||||||||||
Sbjct: 12 tgacagaagagagtgagcac 31
>39792_aly-MIR156c:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 tgcgtgctcactgctctatctgtcag 100
||||||||||||||||||||||||||
Sbjct: 69 tgcgtgctcactgctctatctgtcag 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcac 32
||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcac 30
>42451_sof-MIR156:mirbase
Length = 137
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 70 agctatgcgtgctcactgctctatctgtcagcc 102
||||||||||||||||| |||| ||||||||||
Sbjct: 89 agctatgcgtgctcacttctctctctgtcagcc 121
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacccatggtg 40
|||||||||||||||||||| |||||||
Sbjct: 21 tgacagaagagagtgagcacacatggtg 48
>40005_ath-MIR156d:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 gaagttgacagaagagagtgagcac 32
|||||||||||||||||||||||||
Sbjct: 13 gaagttgacagaagagagtgagcac 37
>39793_aly-MIR156d:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 gaagttgacagaagagagtgagcac 32
|||||||||||||||||||||||||
Sbjct: 12 gaagttgacagaagagagtgagcac 36
>42689_zma-MIR156l:mirbase
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 gcgtgctcactgctctatctgtca 99
||||||||||||||||||||||||
Sbjct: 64 gcgtgctcactgctctatctgtca 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcac 32
||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcac 21
>42680_zma-MIR156c:mirbase
Length = 139
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacccatggtg 40
|||||||||||||||||||| |||||||
Sbjct: 21 tgacagaagagagtgagcacacatggtg 48
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 70 agctatgcgtgctcactgctctatctgtcagcca 103
||||||||||||||||| |||| | |||||||||
Sbjct: 90 agctatgcgtgctcacttctctctttgtcagcca 123
>42491_sbi-MIR156g:mirbase
Length = 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 gcgtgctcactgctctatctgtca 99
||||||||||||||||||||||||
Sbjct: 63 gcgtgctcactgctctatctgtca 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcac 32
||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcac 21
>42487_sbi-MIR156c:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacccatggtg 40
|||||||||||||||||||| |||||||
Sbjct: 1 tgacagaagagagtgagcacacatggtg 28
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 70 agctatgcgtgctcactgctctatctgtca 99
||||||||||||||||| |||| |||||||
Sbjct: 66 agctatgcgtgctcacttctctctctgtca 95
>41906_osa-MIR156c:mirbase
Length = 149
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacccatggtg 40
|||||||||||||||||||| |||||||
Sbjct: 29 tgacagaagagagtgagcacacatggtg 56
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 70 agctatgcgtgctcactgctctatctgtcagcca 103
||||||| ||||||||| |||| |||||||||||
Sbjct: 90 agctatgtgtgctcacttctctctctgtcagcca 123
>40007_ath-MIR156f:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacccatggtg 40
|||||||||||||||||||| |||||||
Sbjct: 21 tgacagaagagagtgagcacacatggtg 48
>40006_ath-MIR156e:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacccatggtg 40
|||||||||||||||||||| |||||||
Sbjct: 7 tgacagaagagagtgagcacacatggtg 34
>39795_aly-MIR156f:mirbase
Length = 228
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacccatggtg 40
|||||||||||||||||||| |||||||
Sbjct: 68 tgacagaagagagtgagcacacatggtg 95
>39794_aly-MIR156e:mirbase
Length = 150
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacccatggtg 40
|||||||||||||||||||| |||||||
Sbjct: 26 tgacagaagagagtgagcacacatggtg 53
>41909_osa-MIR156f:mirbase
Length = 186
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 agttgacagaagagagtgagcac 32
|||||||||||||||||||||||
Sbjct: 1 agttgacagaagagagtgagcac 23
>41905_osa-MIR156b:mirbase
Length = 176
Score = 46.1 bits (23), Expect = 5e-06
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 68 ggagctatgcgtgctcactgctctatctgtcagcc 102
|||||| |||||||||||| |||||||||||||||
Sbjct: 98 ggagctgtgcgtgctcact-ctctatctgtcagcc 131
>41563_vvi-MIR156c:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacccatggt 39
|||||||||||||||||||| ||||||
Sbjct: 11 tgacagaagagagtgagcacacatggt 37
>41291_ptc-MIR156d:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 agttgacagaagagagtgagcac 32
|||||||||||||||||||||||
Sbjct: 8 agttgacagaagagagtgagcac 30
>40649_mtr-MIR156b:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacccatggt 39
|||||||||||||||||||| ||||||
Sbjct: 6 tgacagaagagagtgagcacacatggt 32
>40425_gma-MIR156a:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 75 tgcgtgctcactgctctatctgtcagc 101
|||||||||||| ||||||||||||||
Sbjct: 79 tgcgtgctcacttctctatctgtcagc 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcac 32
||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcac 40
>40332_rco-MIR156c:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacccatggt 39
|||||||||||||||||||| ||||||
Sbjct: 6 tgacagaagagagtgagcacacatggt 32
>40330_rco-MIR156a:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacccatggt 39
|||||||||||||||||||| ||||||
Sbjct: 6 tgacagaagagagtgagcacacatggt 32
>41913_osa-MIR156j:mirbase
Length = 165
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 gttgacagaagagagtgagcac 32
||||||||||||||||||||||
Sbjct: 40 gttgacagaagagagtgagcac 61
>41911_osa-MIR156h:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 gttgacagaagagagtgagcac 32
||||||||||||||||||||||
Sbjct: 7 gttgacagaagagagtgagcac 28
>41083_tcc-MIR156d:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 ggaagttgacagaagagagtgagcac 32
||||| ||||||||||||||||||||
Sbjct: 15 ggaaggtgacagaagagagtgagcac 40
>40258_bna-MIR156a:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 75 tgcgtgctcactgctctatctgtcag 100
||||||||||||||||| ||||||||
Sbjct: 57 tgcgtgctcactgctctttctgtcag 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcac 32
||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcac 20
>40002_ath-MIR156a:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 75 tgcgtgctcactgctctatctgtcag 100
||||||||||||||||| ||||||||
Sbjct: 78 tgcgtgctcactgctctttctgtcag 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcac 32
||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcac 40
>39790_aly-MIR156a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 75 tgcgtgctcactgctctatctgtcag 100
||||||||||||||||| ||||||||
Sbjct: 106 tgcgtgctcactgctctttctgtcag 131
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcac 32
||||||||||||||||||||
Sbjct: 49 tgacagaagagagtgagcac 68
>42681_zma-MIR156d:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttgacagaagagagtgagcac 32
|||||||||||||||||||||
Sbjct: 15 ttgacagaagagagtgagcac 35
>42679_zma-MIR156b:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttgacagaagagagtgagcac 32
|||||||||||||||||||||
Sbjct: 20 ttgacagaagagagtgagcac 40
>41907_osa-MIR156d:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttgacagaagagagtgagcac 32
|||||||||||||||||||||
Sbjct: 19 ttgacagaagagagtgagcac 39
>41904_osa-MIR156a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 67 tggagctatgcgtgctcactgctctatctgtca 99
|||||||| ||||||||||| |||| |||||||
Sbjct: 63 tggagctacgcgtgctcacttctctctctgtca 95
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcac 32
||||||||||||||||||||
Sbjct: 7 tgacagaagagagtgagcac 26
>41728_bdi-MIR156c:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttgacagaagagagtgagcac 32
|||||||||||||||||||||
Sbjct: 31 ttgacagaagagagtgagcac 51
>41292_ptc-MIR156e:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttgacagaagagagtgagcac 32
|||||||||||||||||||||
Sbjct: 10 ttgacagaagagagtgagcac 30
>41086_tcc-MIR156g:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttgacagaagagagtgagcac 32
|||||||||||||||||||||
Sbjct: 20 ttgacagaagagagtgagcac 40
>41045_ghr-MIR156d:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttgacagaagagagtgagcac 32
|||||||||||||||||||||
Sbjct: 8 ttgacagaagagagtgagcac 28
>40656_mtr-MIR156i:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttgacagaagagagtgagcac 32
|||||||||||||||||||||
Sbjct: 5 ttgacagaagagagtgagcac 25
>40651_mtr-MIR156d:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttgacagaagagagtgagcac 32
|||||||||||||||||||||
Sbjct: 5 ttgacagaagagagtgagcac 25
>40331_rco-MIR156b:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ttgacagaagagagtgagcac 32
|||||||||||||||||||||
Sbjct: 5 ttgacagaagagagtgagcac 25
>40008_ath-MIR156g:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 14 gacagaagagagtgagcacccatgg 38
||||||||||||||||||| |||||
Sbjct: 12 gacagaagagagtgagcacacatgg 36
>39796_aly-MIR156g:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 14 gacagaagagagtgagcacccatgg 38
||||||||||||||||||| |||||
Sbjct: 33 gacagaagagagtgagcacacatgg 57
>42685_zma-MIR156h:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcac 32
||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcac 39
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 gcgtgctcactgctctatctgtca 99
|||||||||||||||| |||||||
Sbjct: 74 gcgtgctcactgctctttctgtca 97
>42684_zma-MIR156g:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcac 32
||||||||||||||||||||
Sbjct: 4 tgacagaagagagtgagcac 23
>42683_zma-MIR156f:mirbase
Length = 167
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcac 32
||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcac 40
>42682_zma-MIR156e:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcac 32
||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcac 39
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 gcgtgctcactgctctatctgtca 99
|||||||||||||||| |||||||
Sbjct: 83 gcgtgctcactgctctctctgtca 106
