miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>40673_mtr-MIR166f:mirbase
          Length = 179

 Score = 69.9 bits (35), Expect = 1e-12
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                  
Query: 233 gatattgagactgatctcggaccaggcttcattcctcac 271
           |||||||||| ||||||||||||||||||||||||||||
Sbjct: 138 gatattgagagtgatctcggaccaggcttcattcctcac 176




>41940_osa-MIR166d:mirbase
          Length = 125

 Score = 58.0 bits (29), Expect = 4e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 239 gagactgatctcggaccaggcttcattcc 267
           |||||||||||||||||||||||||||||
Sbjct: 81  gagactgatctcggaccaggcttcattcc 109




>41096_tcc-MIR166c:mirbase
          Length = 141

 Score = 56.0 bits (28), Expect = 2e-08
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 244 tgatctcggaccaggcttcattcctcac 271
           ||||||||||||||||||||||||||||
Sbjct: 96  tgatctcggaccaggcttcattcctcac 123




>41943_osa-MIR166g:mirbase
          Length = 145

 Score = 54.0 bits (27), Expect = 6e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 245 gatctcggaccaggcttcattcctcac 271
           |||||||||||||||||||||||||||
Sbjct: 111 gatctcggaccaggcttcattcctcac 137




>41748_bdi-MIR166f:mirbase
          Length = 145

 Score = 54.0 bits (27), Expect = 6e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 245 gatctcggaccaggcttcattcctcac 271
           |||||||||||||||||||||||||||
Sbjct: 90  gatctcggaccaggcttcattcctcac 116




>41336_ptc-MIR166o:mirbase
          Length = 324

 Score = 54.0 bits (27), Expect = 6e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 242 actgatctcggaccaggcttcattcct 268
           |||||||||||||||||||||||||||
Sbjct: 289 actgatctcggaccaggcttcattcct 315




>40675_mtr-MIR166h:mirbase
          Length = 92

 Score = 54.0 bits (27), Expect = 6e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 237 ttgagactgatctcggaccaggcttcattcc 267
           |||||| ||||||||||||||||||||||||
Sbjct: 55  ttgagaatgatctcggaccaggcttcattcc 85




>40668_mtr-MIR166:mirbase
          Length = 121

 Score = 54.0 bits (27), Expect = 6e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 237 ttgagactgatctcggaccaggcttcattcc 267
           |||||| ||||||||||||||||||||||||
Sbjct: 70  ttgagaatgatctcggaccaggcttcattcc 100




>42728_zma-MIR166l:mirbase
          Length = 137

 Score = 52.0 bits (26), Expect = 3e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 245 gatctcggaccaggcttcattcctca 270
           ||||||||||||||||||||||||||
Sbjct: 94  gatctcggaccaggcttcattcctca 119




>41583_vvi-MIR166a:mirbase
          Length = 130

 Score = 50.1 bits (25), Expect = 1e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 244 tgatctcggaccaggcttcattcct 268
           |||||||||||||||||||||||||
Sbjct: 95  tgatctcggaccaggcttcattcct 119



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 139 aatgaggtttgatccaagatc 159
           |||||||||||||||||||||
Sbjct: 13  aatgaggtttgatccaagatc 33



 Score = 40.1 bits (20), Expect = 0.001
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 26 ggtgtttggaatgtggtttgatcc 49
          ||||||||||||| ||||||||||
Sbjct: 4  ggtgtttggaatgaggtttgatcc 27




>41335_ptc-MIR166n:mirbase
          Length = 331

 Score = 50.1 bits (25), Expect = 1e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 244 tgatctcggaccaggcttcattcct 268
           |||||||||||||||||||||||||
Sbjct: 298 tgatctcggaccaggcttcattcct 322




>42719_zma-MIR166c:mirbase
          Length = 92

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 244 tgatctcggaccaggcttcattcc 267
           ||||||||||||||||||||||||
Sbjct: 67  tgatctcggaccaggcttcattcc 90




>42511_sbi-MIR166d:mirbase
          Length = 87

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 244 tgatctcggaccaggcttcattcc 267
           ||||||||||||||||||||||||
Sbjct: 62  tgatctcggaccaggcttcattcc 85




>41747_bdi-MIR166e:mirbase
          Length = 151

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 244 tgatctcggaccaggcttcattcc 267
           ||||||||||||||||||||||||
Sbjct: 94  tgatctcggaccaggcttcattcc 117




>41590_vvi-MIR166h:mirbase
          Length = 100

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 244 tgatctcggaccaggcttcattcc 267
           ||||||||||||||||||||||||
Sbjct: 64  tgatctcggaccaggcttcattcc 87




>41329_ptc-MIR166h:mirbase
          Length = 101

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 244 tgatctcggaccaggcttcattcc 267
           ||||||||||||||||||||||||
Sbjct: 67  tgatctcggaccaggcttcattcc 90




>41328_ptc-MIR166g:mirbase
          Length = 103

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 244 tgatctcggaccaggcttcattcc 267
           ||||||||||||||||||||||||
Sbjct: 69  tgatctcggaccaggcttcattcc 92




>41223_csi-MIR166b:mirbase
          Length = 192

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 244 tgatctcggaccaggcttcattcc 267
           ||||||||||||||||||||||||
Sbjct: 146 tgatctcggaccaggcttcattcc 169




>41213_crt-MIR166a:mirbase
          Length = 202

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 244 tgatctcggaccaggcttcattcc 267
           ||||||||||||||||||||||||
Sbjct: 156 tgatctcggaccaggcttcattcc 179




>41169_aqc-MIR166c:mirbase
          Length = 116

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 245 gatctcggaccaggcttcattcct 268
           ||||||||||||||||||||||||
Sbjct: 85  gatctcggaccaggcttcattcct 108




>41097_tcc-MIR166d:mirbase
          Length = 119

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 244 tgatctcggaccaggcttcattcc 267
           ||||||||||||||||||||||||
Sbjct: 74  tgatctcggaccaggcttcattcc 97




>41095_tcc-MIR166b:mirbase
          Length = 178

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 244 tgatctcggaccaggcttcattcc 267
           ||||||||||||||||||||||||
Sbjct: 134 tgatctcggaccaggcttcattcc 157




>40350_rco-MIR166d:mirbase
          Length = 92

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 244 tgatctcggaccaggcttcattcc 267
           ||||||||||||||||||||||||
Sbjct: 62  tgatctcggaccaggcttcattcc 85




>42721_zma-MIR166e:mirbase
          Length = 87

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 245 gatctcggaccaggcttcattcc 267
           |||||||||||||||||||||||
Sbjct: 63  gatctcggaccaggcttcattcc 85




>42720_zma-MIR166d:mirbase
          Length = 104

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 245 gatctcggaccaggcttcattcc 267
           |||||||||||||||||||||||
Sbjct: 80  gatctcggaccaggcttcattcc 102




>42718_zma-MIR166b:mirbase
          Length = 116

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 245 gatctcggaccaggcttcattcc 267
           |||||||||||||||||||||||
Sbjct: 92  gatctcggaccaggcttcattcc 114




>42717_zma-MIR166a:mirbase
          Length = 213

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 245 gatctcggaccaggcttcattcc 267
           |||||||||||||||||||||||
Sbjct: 185 gatctcggaccaggcttcattcc 207




>42518_sbi-MIR166k:mirbase
          Length = 103

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 247 tctcggaccaggcttcattcctc 269
           |||||||||||||||||||||||
Sbjct: 81  tctcggaccaggcttcattcctc 103




>42515_sbi-MIR166h:mirbase
          Length = 185

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 245 gatctcggaccaggcttcattcc 267
           |||||||||||||||||||||||
Sbjct: 158 gatctcggaccaggcttcattcc 180




>42508_sbi-MIR166a:mirbase
          Length = 108

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 245 gatctcggaccaggcttcattcc 267
           |||||||||||||||||||||||
Sbjct: 84  gatctcggaccaggcttcattcc 106




>41946_osa-MIR166j:mirbase
          Length = 140

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 245 gatctcggaccaggcttcattcctcac 271
           ||||||||| |||||||||||||||||
Sbjct: 111 gatctcggatcaggcttcattcctcac 137




>41945_osa-MIR166i:mirbase
          Length = 145

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 245 gatctcggaccaggcttcattcctcac 271
           ||||||||| |||||||||||||||||
Sbjct: 111 gatctcggatcaggcttcattcctcac 137




>41938_osa-MIR166b:mirbase
          Length = 206

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 245 gatctcggaccaggcttcattcc 267
           |||||||||||||||||||||||
Sbjct: 164 gatctcggaccaggcttcattcc 186




>41937_osa-MIR166a:mirbase
          Length = 145

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 245 gatctcggaccaggcttcattcc 267
           |||||||||||||||||||||||
Sbjct: 106 gatctcggaccaggcttcattcc 128




>41745_bdi-MIR166c:mirbase
          Length = 172

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 245 gatctcggaccaggcttcattcc 267
           |||||||||||||||||||||||
Sbjct: 117 gatctcggaccaggcttcattcc 139




>41744_bdi-MIR166b:mirbase
          Length = 244

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 245 gatctcggaccaggcttcattcc 267
           |||||||||||||||||||||||
Sbjct: 188 gatctcggaccaggcttcattcc 210




>40670_mtr-MIR166c:mirbase
          Length = 105

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 247 tctcggaccaggcttcattcctc 269
           |||||||||||||||||||||||
Sbjct: 78  tctcggaccaggcttcattcctc 100




>40669_mtr-MIR166b:mirbase
          Length = 170

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 246 atctcggaccaggcttcattcct 268
           |||||||||||||||||||||||
Sbjct: 142 atctcggaccaggcttcattcct 164




>39377_pab-MIR166b:mirbase
          Length = 129

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 246 atctcggaccaggcttcattcct 268
           |||||||||||||||||||||||
Sbjct: 68  atctcggaccaggcttcattcct 90




>41338_ptc-MIR166q:mirbase
          Length = 151

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 247 tctcggaccaggcttcattcct 268
           ||||||||||||||||||||||
Sbjct: 121 tctcggaccaggcttcattcct 142




>41167_aqc-MIR166a:mirbase
          Length = 111

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 248 ctcggaccaggcttcattcctc 269
           ||||||||||||||||||||||
Sbjct: 85  ctcggaccaggcttcattcctc 106




>39822_aly-MIR166b:mirbase
          Length = 148

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 246 atctcggaccaggcttcattcc 267
           ||||||||||||||||||||||
Sbjct: 107 atctcggaccaggcttcattcc 128




>42729_zma-MIR166m:mirbase
          Length = 156

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 tcggaccaggcttcattcctc 269
           |||||||||||||||||||||
Sbjct: 117 tcggaccaggcttcattcctc 137




>42725_zma-MIR166i:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 61  tctcggaccaggcttcattcc 81




>42516_sbi-MIR166i:mirbase
          Length = 86

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 64  tctcggaccaggcttcattcc 84




>42513_sbi-MIR166f:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 tcggaccaggcttcattcctc 269
           |||||||||||||||||||||
Sbjct: 100 tcggaccaggcttcattcctc 120




>41944_osa-MIR166h:mirbase
          Length = 119

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 tcggaccaggcttcattcctc 269
           |||||||||||||||||||||
Sbjct: 89  tcggaccaggcttcattcctc 109




>41942_osa-MIR166f:mirbase
          Length = 107

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 70  tctcggaccaggcttcattcc 90




>41584_vvi-MIR166b:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 tcggaccaggcttcattcctc 269
           |||||||||||||||||||||
Sbjct: 68  tcggaccaggcttcattcctc 88




>41334_ptc-MIR166m:mirbase
          Length = 105

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 74  tctcggaccaggcttcattcc 94




>41170_aqc-MIR166d:mirbase
          Length = 129

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 tcggaccaggcttcattcctc 269
           |||||||||||||||||||||
Sbjct: 105 tcggaccaggcttcattcctc 125




>41025_pvu-MIR166a:mirbase
          Length = 670

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 226 tctcggaccaggcttcattcc 246




>40674_mtr-MIR166g:mirbase
          Length = 107

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 80  tctcggaccaggcttcattcc 100




>40440_gma-MIR166b:mirbase
          Length = 167

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 126 tctcggaccaggcttcattcc 146




>40267_bna-MIR166d:mirbase
          Length = 128

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 75  tctcggaccaggcttcattcc 95




>40038_ath-MIR166g:mirbase
          Length = 122

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 83  tctcggaccaggcttcattcc 103




>40035_ath-MIR166d:mirbase
          Length = 113

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 85  tctcggaccaggcttcattcc 105




>40034_ath-MIR166c:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 101 tctcggaccaggcttcattcc 121




>39827_aly-MIR166g:mirbase
          Length = 131

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 87  tctcggaccaggcttcattcc 107




>39824_aly-MIR166d:mirbase
          Length = 113

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 85  tctcggaccaggcttcattcc 105




>39823_aly-MIR166c:mirbase
          Length = 121

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 93  tctcggaccaggcttcattcc 113




>39734_smo-MIR166b:mirbase
          Length = 136

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 97  tctcggaccaggcttcattcc 117




>39733_smo-MIR166a:mirbase
          Length = 145

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 247 tctcggaccaggcttcattcc 267
           |||||||||||||||||||||
Sbjct: 106 tctcggaccaggcttcattcc 126




>39376_pab-MIR166a:mirbase
          Length = 90

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 tcggaccaggcttcattcctc 269
           |||||||||||||||||||||
Sbjct: 55  tcggaccaggcttcattcctc 75