miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40448_gma-MIR168:mirbase
          Length = 125

 Score = 71.9 bits (36), Expect = 1e-13
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                              
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaaccg 49
          ||||||||||||||||||||||||||||||||||||
Sbjct: 7  gcggtctctaattcgcttggtgcaggtcgggaaccg 42



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 117 ggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||||||||||||||||
Sbjct: 84  ggatcccgccttgcatcaactgaatcgga 112




>41596_vvi-MIR168:mirbase
          Length = 132

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 16 ggtctctaattcgcttggtgcaggtcgggaaccg 49
          ||||||||||||||||||||||||||||||||||
Sbjct: 1  ggtctctaattcgcttggtgcaggtcgggaaccg 34



 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 118 gatcccgccttgcatcaactgaatcgga 145
           ||||||||||||||||||||||||||||
Sbjct: 99  gatcccgccttgcatcaactgaatcgga 126




>41215_crt-MIR168:mirbase
          Length = 201

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||||||||||||||
Sbjct: 9  gcggtctctaattcgcttggtgcaggtcgggaac 42



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 117 ggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||||||||||||||||
Sbjct: 139 ggatcccgccttgcatcaactgaatcgga 167




>41210_ccl-MIR168:mirbase
          Length = 176

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||||||||||||||
Sbjct: 8  gcggtctctaattcgcttggtgcaggtcgggaac 41



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 117 ggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||||||||||||||||
Sbjct: 138 ggatcccgccttgcatcaactgaatcgga 166




>41101_tcc-MIR168:mirbase
          Length = 167

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                            
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||||||||||||||
Sbjct: 9  gcggtctctaattcgcttggtgcaggtcgggaac 42



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 117 ggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||||||||||||||||
Sbjct: 123 ggatcccgccttgcatcaactgaatcgga 151




>41348_ptc-MIR168b:mirbase
          Length = 136

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 16 ggtctctaattcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||||||||||||
Sbjct: 1  ggtctctaattcgcttggtgcaggtcgggaac 32



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 117 ggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||||||||||||||||
Sbjct: 106 ggatcccgccttgcatcaactgaatcgga 134




>40043_ath-MIR168a:mirbase
          Length = 138

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 112 ggatcggatcccgccttgcatcaactgaatcgga 145
           |||| |||||||||||||||||||||||||||||
Sbjct: 94  ggattggatcccgccttgcatcaactgaatcgga 127



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 24 attcgcttggtgcaggtcgggaacc 48
          |||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaacc 40




>39832_aly-MIR168a:mirbase
          Length = 155

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 112 ggatcggatcccgccttgcatcaactgaatcgga 145
           |||| |||||||||||||||||||||||||||||
Sbjct: 100 ggattggatcccgccttgcatcaactgaatcgga 133



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 24 attcgcttggtgcaggtcgggaacc 48
          |||||||||||||||||||||||||
Sbjct: 22 attcgcttggtgcaggtcgggaacc 46




>41347_ptc-MIR168a:mirbase
          Length = 160

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 117 ggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||||||||||||||||
Sbjct: 130 ggatcccgccttgcatcaactgaatcgga 158



 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                          
Query: 16 ggtctctaattcgcttggtgcaggtcgggaac 47
          ||||||| ||||||||||||||||||||||||
Sbjct: 1  ggtctctgattcgcttggtgcaggtcgggaac 32




>40355_rco-MIR168:mirbase
          Length = 131

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 21 ctaattcgcttggtgcaggtcgggaac 47
          |||||||||||||||||||||||||||
Sbjct: 1  ctaattcgcttggtgcaggtcgggaac 27



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 117 ggatcccgccttgcatcaactgaatcg 143
           |||||||||||||||||||||||||||
Sbjct: 102 ggatcccgccttgcatcaactgaatcg 128




>42742_zma-MIR168b:mirbase
          Length = 104

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||||||| |||||||||
Sbjct: 62  cggatcccgccttgcatcaagtgaatcgga 91




>40044_ath-MIR168b:mirbase
          Length = 124

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
          ||||||||  ||||||||||||||||||||||||
Sbjct: 7  gcggtctcggattcgcttggtgcaggtcgggaac 40




>39833_aly-MIR168b:mirbase
          Length = 176

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 14 gcggtctctaattcgcttggtgcaggtcgggaac 47
          ||||||||  ||||||||||||||||||||||||
Sbjct: 31 gcggtctcggattcgcttggtgcaggtcgggaac 64



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 118 gatcccgccttgcatcaactgaatcgga 145
           ||||||| |||| |||||||||||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcgga 137




>40271_bna-MIR168:mirbase
          Length = 133

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 112 ggatcggatcccgccttgcatcaactgaatc 142
           |||||||||||||||||| ||||| ||||||
Sbjct: 89  ggatcggatcccgccttgtatcaagtgaatc 119



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 26 tcgcttggtgcaggtcgggaac 47
          ||||||||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaac 39




>42741_zma-MIR168a:mirbase
          Length = 104

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||| ||| |||||||||
Sbjct: 62  cggatcccgccttgcaccaagtgaatcgga 91




>42470_ssp-MIR168a:mirbase
          Length = 99

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||| ||| |||||||||
Sbjct: 59  cggatcccgccttgcaccaagtgaatcgga 88




>42460_sof-MIR168b:mirbase
          Length = 103

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||| ||| |||||||||
Sbjct: 61  cggatcccgccttgcaccaagtgaatcgga 90




>42459_sof-MIR168a:mirbase
          Length = 104

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||| ||| |||||||||
Sbjct: 62  cggatcccgccttgcaccaagtgaatcgga 91




>41962_osa-MIR168a:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||| ||| |||||||||
Sbjct: 54  cggatcccgccttgcaccaagtgaatcgga 83




>41961_osa-MIR168a:mirbase
          Length = 87

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||| ||| |||||||||
Sbjct: 54  cggatcccgccttgcaccaagtgaatcgga 83




>41888_hvu-MIR168:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||| ||| |||||||||
Sbjct: 65  cggatcccgccttgcaccaagtgaatcgga 94




>41887_hvu-MIR168:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||| ||| |||||||||
Sbjct: 65  cggatcccgccttgcaccaagtgaatcgga 94




>41753_bdi-MIR168:mirbase
          Length = 136

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 116 cggatcccgccttgcatcaactgaatcgga 145
           |||||||||||||||| ||| |||||||||
Sbjct: 74  cggatcccgccttgcaccaagtgaatcgga 103