miRNEST 2.0, an integrative microRNA resource :: BLAST
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 93.7 bits (47), Expect = 3e-20
Identities = 87/98 (88%), Gaps = 3/98 (3%)
Strand = Plus / Minus
Query: 27 cgctggatgcagaggtttatcgaccgattcttgttttgtgttcttccacagccaaattc- 85
||||||||||||||||||||||| |||||| |||| |||| | || |||| ||||||||
Sbjct: 102 cgctggatgcagaggtttatcgatcgattcatgttctgtgatttttcaca-ccaaattcc 44
Query: 86 -aggaagagatcgatgaaccgctgcgtccagcgacttt 122
|||||||||||||||||||||||| ||||| ||||||
Sbjct: 43 caggaagagatcgatgaaccgctgcctccagtgacttt 6
>41578_vvi-MIR162:mirbase
Length = 103
Score = 85.7 bits (43), Expect = 8e-18
Identities = 84/95 (88%), Gaps = 2/95 (2%)
Strand = Plus / Minus
Query: 27 cgctggatgcagaggtttatcgaccgattcttgttttgtgttcttccacagccaaattca 86
||||||||||||||||||||||||||||||||| | || || || |||| ||| ||||
Sbjct: 95 cgctggatgcagaggtttatcgaccgattcttgatctg-cttttttcaca-acaatttca 38
Query: 87 ggaagagatcgatgaaccgctgcgtccagcgactt 121
||||||||||||||||||||||| ||||| |||||
Sbjct: 37 ggaagagatcgatgaaccgctgcatccagtgactt 3
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 85.7 bits (43), Expect = 8e-18
Identities = 84/94 (89%), Gaps = 4/94 (4%)
Strand = Plus / Minus
Query: 26 gcgctggatgcagaggtttatcgaccgattcttgt-tttgtgttcttc-cacagccaaat 83
|||||||||||||||||||||||| |||||| ||| |||||||| ||| |||| | ||||
Sbjct: 117 gcgctggatgcagaggtttatcgatcgattcatgtatttgtgttattctcacaacaaaat 58
Query: 84 tc--aggaagagatcgatgaaccgctgcgtccag 115
|| |||||||||||||||||||||||| |||||
Sbjct: 57 tctcaggaagagatcgatgaaccgctgcctccag 24
>41090_tcc-MIR162:mirbase
Length = 131
Score = 71.9 bits (36), Expect = 1e-13
Identities = 80/91 (87%), Gaps = 4/91 (4%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattcttgt-tttgtgttcttc-cacagccaaattc- 85
||||||||||||||||||||| ||| || ||| |||||||| ||| |||| | ||||||
Sbjct: 111 ctggatgcagaggtttatcgatcgaatcatgtatttgtgttattctcacaacaaaattcc 52
Query: 86 -aggaagagatcgatgaaccgctgcgtccag 115
|||||||||||||||||||||||| |||||
Sbjct: 51 caggaagagatcgatgaaccgctgcctccag 21
>40663_mtr-MIR162:mirbase
Length = 124
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 23 tgagcgctggatgcagaggtttatcgaccgattcttgttt 62
|||||||||||||||||||||||||||||||||| |||||
Sbjct: 113 tgagcgctggatgcagaggtttatcgaccgattcatgttt 74
>40437_gma-MIR162:mirbase
Length = 102
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 82 attcaggaagagatcgatgaaccgctgcgtccagcgactt 121
|||||||||||||||||||||||||||| ||||| |||||
Sbjct: 43 attcaggaagagatcgatgaaccgctgcatccagtgactt 4
>40024_ath-MIR162a:mirbase
Length = 140
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 85 caggaagagatcgatgaaccgctgcgtccagcgact 120
||||||||||||||||||||||||| ||||||||||
Sbjct: 55 caggaagagatcgatgaaccgctgcctccagcgact 20
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 27 cgctggatgcagaggtttatcga 49
|||||||||||||||||||||||
Sbjct: 111 cgctggatgcagaggtttatcga 89
>39812_aly-MIR162a:mirbase
Length = 228
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 85 caggaagagatcgatgaaccgctgcgtccagcgact 120
||||||||||||||||||||||||| ||||||||||
Sbjct: 98 caggaagagatcgatgaaccgctgcctccagcgact 63
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 27 cgctggatgcagaggtttatcga 49
|||||||||||||||||||||||
Sbjct: 158 cgctggatgcagaggtttatcga 136
>40025_ath-MIR162b:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 25 agcgctggatgcagaggtttatcgaccgattcttg 59
||||||||||||||||||||||||| |||||||||
Sbjct: 103 agcgctggatgcagaggtttatcgatcgattcttg 69
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 93 gatcgatgaaccgctgcgtccagcgactt 121
||||||||||||||||| |||||||||||
Sbjct: 34 gatcgatgaaccgctgcctccagcgactt 6
>41220_csi-MIR162:mirbase
Length = 201
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 23 tgagcgctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||||||||| ||||||
Sbjct: 187 tgagcgctggatgcagaggtttatcgatcgattc 154
>42708_zma-MIR162:mirbase
Length = 130
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||||||||||
Sbjct: 130 ctggatgcagaggtttatcgaccgattc 103
>41530_sly-MIR162:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||||||||||
Sbjct: 99 ctggatgcagaggtttatcgaccgattc 72
>40342_rco-MIR162:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 25 agcgctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||||||| ||||||
Sbjct: 100 agcgctggatgcagaggtttatcgatcgattc 69
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 85 caggaagagatcgatgaaccgctgcgtccag 115
||||||||||||||||||||||||| |||||
Sbjct: 34 caggaagagatcgatgaaccgctgcctccag 4
>39813_aly-MIR162b:mirbase
Length = 184
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 25 agcgctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||||||| ||||||
Sbjct: 137 agcgctggatgcagaggtttatcgatcgattc 106
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 93 gatcgatgaaccgctgcgtccagcgactt 121
||||||||||||||||| |||||||||||
Sbjct: 72 gatcgatgaaccgctgcctccagcgactt 44
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 85 caggaagagatcgatgaaccgctgcgtccag 115
||||||||||||||||||||||||| |||||
Sbjct: 41 caggaagagatcgatgaaccgctgcctccag 11
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 25 agcgctggatgcagaggtttatcgaccgattcttgtttt 63
||||||||||||||||||||||||| || ||| ||||||
Sbjct: 102 agcgctggatgcagaggtttatcgatcggttcatgtttt 64
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 83 ttcaggaagagatcgatgaaccgctgcgtccag 115
|||||||| |||||||||||||||||| |||||
Sbjct: 43 ttcaggaaaagatcgatgaaccgctgcctccag 11
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcga 49
|||||||||||||||||||||
Sbjct: 98 ctggatgcagaggtttatcga 78
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 83 ttcaggaagagatcgatgaaccgctgcgtccag 115
|||||||| |||||||||||||||||| |||||
Sbjct: 43 ttcaggaaaagatcgatgaaccgctgcctccag 11
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcga 49
|||||||||||||||||||||
Sbjct: 98 ctggatgcagaggtttatcga 78
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||| ||||||
Sbjct: 127 ctggatgcagaggtttatcgatcgattc 100
>41929_osa-MIR162a:mirbase
Length = 171
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||||||||||| ||||||
Sbjct: 163 ctggatgcagaggtttatcgatcgattc 136
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 31 ggatgcagaggtttatcgaccgattc 56
||||||||||||||||||| ||||||
Sbjct: 129 ggatgcagaggtttatcgatcgattc 104
>41930_osa-MIR162b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 29 ctggatgcagaggtttatcgaccgattc 56
||||||||||||| ||||||| ||||||
Sbjct: 124 ctggatgcagaggcttatcgatcgattc 97
