miRNEST 2.0, an integrative microRNA resource :: BLAST
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 93.7 bits (47), Expect = 3e-20
Identities = 87/98 (88%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 24 aaagtcgctggacgcagcggttcatcgatctcttcct--gaatttggctgtggaagaaca 81
|||||| ||||| |||||||||||||||||||||||| |||||||| |||| || | ||
Sbjct: 6 aaagtcactggaggcagcggttcatcgatctcttcctgggaatttgg-tgtgaaaaatca 64
Query: 82 caaaacaagaatcggtcgataaacctctgcatccagcg 119
|| |||| |||||| |||||||||||||||||||||||
Sbjct: 65 cagaacatgaatcgatcgataaacctctgcatccagcg 102
>41578_vvi-MIR162:mirbase
Length = 103
Score = 85.7 bits (43), Expect = 8e-18
Identities = 84/95 (88%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 25 aagtcgctggacgcagcggttcatcgatctcttcctgaatttggctgtggaagaacacaa 84
||||| ||||| ||||||||||||||||||||||||||| ||| |||| || || ||
Sbjct: 3 aagtcactggatgcagcggttcatcgatctcttcctgaaattgt-tgtgaaaaaag-cag 60
Query: 85 aacaagaatcggtcgataaacctctgcatccagcg 119
| |||||||||||||||||||||||||||||||||
Sbjct: 61 atcaagaatcggtcgataaacctctgcatccagcg 95
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 85.7 bits (43), Expect = 8e-18
Identities = 84/94 (89%), Gaps = 4/94 (4%)
Strand = Plus / Plus
Query: 31 ctggacgcagcggttcatcgatctcttcct--gaatttggctgtg-gaagaacacaaa-a 86
||||| |||||||||||||||||||||||| |||||| | |||| ||| |||||||| |
Sbjct: 24 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaata 83
Query: 87 caagaatcggtcgataaacctctgcatccagcgc 120
|| |||||| ||||||||||||||||||||||||
Sbjct: 84 catgaatcgatcgataaacctctgcatccagcgc 117
>41090_tcc-MIR162:mirbase
Length = 131
Score = 71.9 bits (36), Expect = 1e-13
Identities = 80/91 (87%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 31 ctggacgcagcggttcatcgatctcttcct--gaatttggctgtg-gaagaacacaaa-a 86
||||| |||||||||||||||||||||||| |||||| | |||| ||| |||||||| |
Sbjct: 21 ctggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataacacaaata 80
Query: 87 caagaatcggtcgataaacctctgcatccag 117
|| || ||| |||||||||||||||||||||
Sbjct: 81 catgattcgatcgataaacctctgcatccag 111
>40663_mtr-MIR162:mirbase
Length = 124
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 84 aaacaagaatcggtcgataaacctctgcatccagcgctca 123
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 74 aaacatgaatcggtcgataaacctctgcatccagcgctca 113
>40437_gma-MIR162:mirbase
Length = 102
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 25 aagtcgctggacgcagcggttcatcgatctcttcctgaat 64
||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 4 aagtcactggatgcagcggttcatcgatctcttcctgaat 43
>40024_ath-MIR162a:mirbase
Length = 140
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 26 agtcgctggacgcagcggttcatcgatctcttcctg 61
|||||||||| |||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 97 tcgataaacctctgcatccagcg 119
|||||||||||||||||||||||
Sbjct: 89 tcgataaacctctgcatccagcg 111
>39812_aly-MIR162a:mirbase
Length = 228
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 26 agtcgctggacgcagcggttcatcgatctcttcctg 61
|||||||||| |||||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatctcttcctg 98
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 97 tcgataaacctctgcatccagcg 119
|||||||||||||||||||||||
Sbjct: 136 tcgataaacctctgcatccagcg 158
>40025_ath-MIR162b:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 87 caagaatcggtcgataaacctctgcatccagcgct 121
||||||||| |||||||||||||||||||||||||
Sbjct: 69 caagaatcgatcgataaacctctgcatccagcgct 103
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 25 aagtcgctggacgcagcggttcatcgatc 53
||||||||||| |||||||||||||||||
Sbjct: 6 aagtcgctggaggcagcggttcatcgatc 34
>41220_csi-MIR162:mirbase
Length = 201
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 90 gaatcggtcgataaacctctgcatccagcgctca 123
|||||| |||||||||||||||||||||||||||
Sbjct: 154 gaatcgatcgataaacctctgcatccagcgctca 187
>42708_zma-MIR162:mirbase
Length = 130
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 90 gaatcggtcgataaacctctgcatccag 117
||||||||||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 90 gaatcggtcgataaacctctgcatccag 117
||||||||||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>40342_rco-MIR162:mirbase
Length = 101
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 90 gaatcggtcgataaacctctgcatccagcgct 121
|||||| |||||||||||||||||||||||||
Sbjct: 69 gaatcgatcgataaacctctgcatccagcgct 100
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 31 ctggacgcagcggttcatcgatctcttcctg 61
||||| |||||||||||||||||||||||||
Sbjct: 4 ctggaggcagcggttcatcgatctcttcctg 34
>39813_aly-MIR162b:mirbase
Length = 184
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 90 gaatcggtcgataaacctctgcatccagcgct 121
|||||| |||||||||||||||||||||||||
Sbjct: 106 gaatcgatcgataaacctctgcatccagcgct 137
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 25 aagtcgctggacgcagcggttcatcgatc 53
||||||||||| |||||||||||||||||
Sbjct: 44 aagtcgctggaggcagcggttcatcgatc 72
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 31 ctggacgcagcggttcatcgatctcttcctg 61
||||| |||||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatctcttcctg 41
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 83 aaaacaagaatcggtcgataaacctctgcatccagcgct 121
|||||| ||| || |||||||||||||||||||||||||
Sbjct: 64 aaaacatgaaccgatcgataaacctctgcatccagcgct 102
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 31 ctggacgcagcggttcatcgatctcttcctgaa 63
||||| |||||||||||||||||| ||||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 97 tcgataaacctctgcatccag 117
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 31 ctggacgcagcggttcatcgatctcttcctgaa 63
||||| |||||||||||||||||| ||||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctgaa 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 97 tcgataaacctctgcatccag 117
|||||||||||||||||||||
Sbjct: 78 tcgataaacctctgcatccag 98
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 90 gaatcggtcgataaacctctgcatccag 117
|||||| |||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 90 gaatcggtcgataaacctctgcatccag 117
|||||| |||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 90 gaatcggtcgataaacctctgcatcc 115
|||||| |||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>41930_osa-MIR162b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 90 gaatcggtcgataaacctctgcatccag 117
|||||| ||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
