miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40453_gma-MIR169e:mirbase
Length = 120
Score = 61.9 bits (31), Expect = 2e-10
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 19 gtctcgcatgaagaggtagagagagtacggtttgagccaaggatgacttgtcggc 73
|||| ||||||||||||||||||||| | |||||||||||||||||||| ||||
Sbjct: 1 gtcttgcatgaagaggtagagagagtgc-ttttgagccaaggatgacttgccggc 54
>41114_tcc-MIR169m:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 gtttgagccaaggatgacttg 68
|||||||||||||||||||||
Sbjct: 18 gtttgagccaaggatgacttg 38
>42538_sbi-MIR169j:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 agccaaggatgacttgtcggccga 76
|||||||||||||||| |||||||
Sbjct: 4 agccaaggatgacttgccggccga 27
>42471_ssp-MIR169:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 53 agccaaggatgacttgtcggccga 76
|||||||||||||||| |||||||
Sbjct: 3 agccaaggatgacttgccggccga 26
>41612_vvi-MIR169p:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 50 ttgagccaaggatgacttgtcggc 73
||||||||||||||||||| ||||
Sbjct: 10 ttgagccaaggatgacttgccggc 33
>41611_vvi-MIR169o:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tttgagccaaggatgacttg 68
||||||||||||||||||||
Sbjct: 9 tttgagccaaggatgacttg 28
>41368_ptc-MIR169n:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 49 tttgagccaaggatgacttg 68
||||||||||||||||||||
Sbjct: 9 tttgagccaaggatgacttg 28
