miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>41158_tcc-MIR530b:mirbase
          Length = 178

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                  
Query: 15 aagatgttgctttgatctgcatttgcacctgcgccttctt 54
          ||||||| || || |||||||||||||||||| |||||||
Sbjct: 4  aagatgtagcctttatctgcatttgcacctgcaccttctt 43




>41509_ptc-MIR530a:mirbase
          Length = 144

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 18 atgttgctttgatctgcatttgcacctgcgcctt 51
          ||||||| || |||||||||||||||||| ||||
Sbjct: 7  atgttgcctttatctgcatttgcacctgcacctt 40




>41510_ptc-MIR530b:mirbase
          Length = 172

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 18 atgttgctttgatctgcatttgcacctgc 46
          ||||||| || ||||||||||||||||||
Sbjct: 7  atgttgcctttatctgcatttgcacctgc 35