miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41572_vvi-MIR159c:mirbase
          Length = 190

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 67/77 (87%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                      
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgctggtttat 70
          |||||||||||||||||||||  |||||||||   ||||| |||||||||||||  ||||
Sbjct: 8  gtggagctccttgaagtccaatagagggtctt-actgggtagattgagctgctgacttat 66

                           
Query: 71 ggattccactgccctat 87
          |||| |||| |||||||
Sbjct: 67 ggatcccacagccctat 83



 Score = 63.9 bits (32), Expect = 5e-11
 Identities = 69/80 (86%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                       
Query: 136 ggataggcttgtggtttgcataactcaggagctgcatcaacccagcct-gacctttattt 194
           |||||||||||||| ||||||| |||||||||||||| | || ||  | || | || |||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagctgcattatccaagtttagatccttgttt 162

                               
Query: 195 ggattgaagggagctctaca 214
           ||||||||||||||||||||
Sbjct: 163 ggattgaagggagctctaca 182




>40397_ahy-MIR159:mirbase
          Length = 197

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 49/53 (92%), Gaps = 1/53 (1%)
 Strand = Plus / Plus

                                                               
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgct 63
          |||||||||||||||||||||  ||||||||||| ||||| ||||||||||||
Sbjct: 2  gtggagctccttgaagtccaacagagggtcttgg-tgggtagattgagctgct 53



 Score = 54.0 bits (27), Expect = 5e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 189 ttatttggattgaagggagctctacat 215
           |||||||||||||||||||||||||||
Sbjct: 154 ttatttggattgaagggagctctacat 180




>42635_tae-MIR159b:mirbase
          Length = 255

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                       
Query: 133 ttgggataggcttgtggtttgcataactcaggagctgcatcaacccagcctgacctttat 192
           ||||||||||||| ||| ||||||  | ||||||||||||||||||  | ||  |  | |
Sbjct: 171 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 230

                                    
Query: 193 ttggattgaagggagctctacatct 217
           ||||||||||||||||||| |||||
Sbjct: 231 ttggattgaagggagctctgcatct 255




>41917_osa-MIR159a:mirbase
          Length = 272

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                       
Query: 133 ttgggataggcttgtggtttgcataactcaggagctgcatcaacccagcctgacctttat 192
           ||||||||||||| ||| ||||||  | ||||||||||||||||||  | ||  |  | |
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242

                                    
Query: 193 ttggattgaagggagctctacatct 217
           ||||||||||||||||||| |||||
Sbjct: 243 ttggattgaagggagctctgcatct 267




>41916_osa-MIR159a:mirbase
          Length = 272

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                       
Query: 133 ttgggataggcttgtggtttgcataactcaggagctgcatcaacccagcctgacctttat 192
           ||||||||||||| ||| ||||||  | ||||||||||||||||||  | ||  |  | |
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242

                                    
Query: 193 ttggattgaagggagctctacatct 217
           ||||||||||||||||||| |||||
Sbjct: 243 ttggattgaagggagctctgcatct 267




>40338_rco-MIR159:mirbase
          Length = 180

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 66/77 (85%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                      
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgctggtttat 70
          |||||||||||||||||||||  |||| |||| | ||||| |||||||||||||   |||
Sbjct: 3  gtggagctccttgaagtccaatagaggatctt-gatgggtagattgagctgctgagctat 61

                           
Query: 71 ggattccactgccctat 87
          |||| |||| |||||||
Sbjct: 62 ggatcccacagccctat 78



 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 192 tttggattgaagggagctctacatct 217
           ||||||||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctctacatct 180



 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 136 ggataggcttgtggtttgcataactcaggagct 168
           |||||||||||||| ||||||| ||||||||||
Sbjct: 98  ggataggcttgtggcttgcatatctcaggagct 130




>40657_mtr-MIR159a:mirbase
          Length = 183

 Score = 54.0 bits (27), Expect = 5e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 187 ctttatttggattgaagggagctctacatct 217
           |||| ||||||||||||||||||||||||||
Sbjct: 147 ctttctttggattgaagggagctctacatct 177




>42695_zma-MIR159f:mirbase
          Length = 215

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 69/82 (84%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                       
Query: 131 ttttgggataggcttgtggtttgcataactcaggagctgcatcaacccag-cctgacctt 189
           ||||| |||||||||||||||||||| ||  |||||||||| | |||| |  ||| ||  
Sbjct: 132 ttttgagataggcttgtggtttgcatgaccgaggagctgcaccgaccccgtgctggccgc 191

                                 
Query: 190 tatttggattgaagggagctct 211
           | ||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213




>41918_osa-MIR159b:mirbase
          Length = 188

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 69/82 (84%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                       
Query: 137 gataggcttgtggtttgcataactcaggagctgcatcaac-ccagcctgacctttatttg 195
           |||||||||||||||||||| ||  |||||| | |||||| ||   ||||||  | ||||
Sbjct: 102 gataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctttg 161

                                 
Query: 196 gattgaagggagctctacatct 217
           |||||||||||||||| |||||
Sbjct: 162 gattgaagggagctctgcatct 183




>39804_aly-MIR159a:mirbase
          Length = 222

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 192 tttggattgaagggagctctacatct 217
           ||||||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctacatct 208




>41024_pvu-MIR159a:mirbase
          Length = 174

 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 47/53 (88%), Gaps = 1/53 (1%)
 Strand = Plus / Plus

                                                               
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgct 63
          |||||||||||||||||||||  |||| ||||   ||||||||||||||||||
Sbjct: 1  gtggagctccttgaagtccaattgaggatctt-actgggtggattgagctgct 52



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 192 tttggattgaagggagctctac 213
           ||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174




>41023_pvu-MIR159a:mirbase
          Length = 174

 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 47/53 (88%), Gaps = 1/53 (1%)
 Strand = Plus / Plus

                                                               
Query: 11 gtggagctccttgaagtccaaaggagggtcttggttgggtggattgagctgct 63
          |||||||||||||||||||||  |||| ||||   ||||||||||||||||||
Sbjct: 1  gtggagctccttgaagtccaattgaggatctt-actgggtggattgagctgct 52



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 192 tttggattgaagggagctctac 213
           ||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174




>42690_zma-MIR159a:mirbase
          Length = 246

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
           |||| |||||||||||||||||||| ||  ||||||||||
Sbjct: 146 tttgagataggcttgtggtttgcatgaccgaggagctgca 185



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 192 tttggattgaagggagctctacatc 216
           |||||||||||||||||||| ||||
Sbjct: 207 tttggattgaagggagctctgcatc 231




>42494_sbi-MIR159:mirbase
          Length = 226

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
           |||| |||||||||||||||||||| ||  ||||||||||
Sbjct: 143 tttgagataggcttgtggtttgcatgaccgaggagctgca 182



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 tttggattgaagggagctct 211
           ||||||||||||||||||||
Sbjct: 204 tttggattgaagggagctct 223




>42468_ssp-MIR159a:mirbase
          Length = 261

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
           |||| |||||||||||||||||||| ||  ||||||||||
Sbjct: 162 tttgagataggcttgtggtttgcatgaccgaggagctgca 201



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 192 tttggattgaagggagctctacatc 216
           |||||||||||||||||||| ||||
Sbjct: 223 tttggattgaagggagctctgcatc 247




>42453_sof-MIR159b:mirbase
          Length = 266

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
           |||| |||||||||||||||||||| ||  ||||||||||
Sbjct: 166 tttgagataggcttgtggtttgcatgaccgaggagctgca 205



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 192 tttggattgaagggagctctacatc 216
           |||||||||||||||||||| ||||
Sbjct: 227 tttggattgaagggagctctgcatc 251




>42452_sof-MIR159a:mirbase
          Length = 265

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 132 tttgggataggcttgtggtttgcataactcaggagctgca 171
           |||| |||||||||||||||||||| ||  ||||||||||
Sbjct: 165 tttgagataggcttgtggtttgcatgaccgaggagctgca 204



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 192 tttggattgaagggagctctacatc 216
           |||||||||||||||||||| ||||
Sbjct: 226 tttggattgaagggagctctgcatc 250




>41218_csi-MIR159:mirbase
          Length = 216

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 186 cctttatttggattgaagggagctctac 213
           ||||| ||||||||||||||||||||||
Sbjct: 180 cctttttttggattgaagggagctctac 207



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 11 gtggagctccttgaagtccaaaggagg 37
          |||||||||||||||||||||| ||||
Sbjct: 11 gtggagctccttgaagtccaaaagagg 37




>40432_gma-MIR159a:mirbase
          Length = 214

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 192 tttggattgaagggagctctaca 214
           |||||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctctaca 197



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 gtggagctccttgaagtccaa 31
          |||||||||||||||||||||
Sbjct: 20 gtggagctccttgaagtccaa 40




>40311_bra-MIR159a:mirbase
          Length = 185

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 192 tttggattgaagggagctctaca 214
           |||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185




>40261_bna-MIR159:mirbase
          Length = 183

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 192 tttggattgaagggagctctaca 214
           |||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183




>42691_zma-MIR159b:mirbase
          Length = 221

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 192 tttggattgaagggagctctacatct 217
           |||||||||||||||||||| |||||
Sbjct: 182 tttggattgaagggagctctgcatct 207




>41922_osa-MIR159f:mirbase
          Length = 188

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 193 ttggattgaagggagctctaca 214
           ||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180




>41883_hvu-MIR159b:mirbase
          Length = 122

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 192 tttggattgaagggagctctacatct 217
           |||||||||||||||||||| |||||
Sbjct: 11  tttggattgaagggagctctgcatct 36




>41868_far-MIR159:mirbase
          Length = 200

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 192 tttggattgaagggagctctacatct 217
           |||||||||||||||||||| |||||
Sbjct: 169 tttggattgaagggagctctgcatct 194




>41300_ptc-MIR159b:mirbase
          Length = 187

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 187 ctttatttggattgaagggagctcta 212
           |||| |||||||||||||||||||||
Sbjct: 153 ctttttttggattgaagggagctcta 178



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 11 gtggagctccttgaagtccaa 31
          |||||||||||||||||||||
Sbjct: 10 gtggagctccttgaagtccaa 30




>40017_ath-MIR159b:mirbase
          Length = 196

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 192 tttggattgaagggagctctacatct 217
           |||||||||||||||||||| |||||
Sbjct: 168 tttggattgaagggagctcttcatct 193




>40016_ath-MIR159a:mirbase
          Length = 184

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 192 tttggattgaagggagctctac 213
           ||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184




>39805_aly-MIR159b:mirbase
          Length = 202

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 192 tttggattgaagggagctctacatct 217
           |||||||||||||||||||| |||||
Sbjct: 169 tttggattgaagggagctcttcatct 194




>42700_zma-MIR159k:mirbase
          Length = 200

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 141 ggcttgtggtttgcataactcaggagctgcatc 173
           |||||||||||||||| ||  ||||||||||||
Sbjct: 126 ggcttgtggtttgcatgaccgaggagctgcatc 158



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 tttggattgaagggagctct 211
           ||||||||||||||||||||
Sbjct: 179 tttggattgaagggagctct 198




>42456_sof-MIR159e:mirbase
          Length = 264

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 132 tttgggataggcttgtggtttgcat 156
           |||| ||||||||||||||||||||
Sbjct: 164 tttgagataggcttgtggtttgcat 188