miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41572_vvi-MIR159c:mirbase
          Length = 190

 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 70/80 (87%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                       
Query: 133 ggataggcttgtggtttgcataactcaggagctgcatcagcccagcct-gacccttattt 191
           |||||||||||||| ||||||| |||||||||||||| | || ||  | || |||| |||
Sbjct: 103 ggataggcttgtggcttgcatatctcaggagctgcattatccaagtttagatccttgttt 162

                               
Query: 192 ggattgaagggagctctaca 211
           ||||||||||||||||||||
Sbjct: 163 ggattgaagggagctctaca 182



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 gtggagctccttgaagtccaa 41
          |||||||||||||||||||||
Sbjct: 8  gtggagctccttgaagtccaa 28




>42635_tae-MIR159b:mirbase
          Length = 255

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                       
Query: 130 ttgggataggcttgtggtttgcataactcaggagctgcatcagcccagcctgacccttat 189
           ||||||||||||| ||| ||||||  | |||||||||||||| |||  | ||  || | |
Sbjct: 171 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 230

                                    
Query: 190 ttggattgaagggagctctacatct 214
           ||||||||||||||||||| |||||
Sbjct: 231 ttggattgaagggagctctgcatct 255




>41917_osa-MIR159a:mirbase
          Length = 272

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                       
Query: 130 ttgggataggcttgtggtttgcataactcaggagctgcatcagcccagcctgacccttat 189
           ||||||||||||| ||| ||||||  | |||||||||||||| |||  | ||  || | |
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242

                                    
Query: 190 ttggattgaagggagctctacatct 214
           ||||||||||||||||||| |||||
Sbjct: 243 ttggattgaagggagctctgcatct 267




>41916_osa-MIR159a:mirbase
          Length = 272

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                       
Query: 130 ttgggataggcttgtggtttgcataactcaggagctgcatcagcccagcctgacccttat 189
           ||||||||||||| ||| ||||||  | |||||||||||||| |||  | ||  || | |
Sbjct: 183 ttgggataggcttatggcttgcatgccccaggagctgcatcaaccctacatggaccctct 242

                                    
Query: 190 ttggattgaagggagctctacatct 214
           ||||||||||||||||||| |||||
Sbjct: 243 ttggattgaagggagctctgcatct 267




>40397_ahy-MIR159:mirbase
          Length = 197

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 184 ccttatttggattgaagggagctctacat 212
           |||||||||||||||||||||||||||||
Sbjct: 152 ccttatttggattgaagggagctctacat 180



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 gtggagctccttgaagtccaa 41
          |||||||||||||||||||||
Sbjct: 2  gtggagctccttgaagtccaa 22




>40338_rco-MIR159:mirbase
          Length = 180

 Score = 54.0 bits (27), Expect = 5e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 184 ccttatttggattgaagggagctctacatct 214
           |||| ||||||||||||||||||||||||||
Sbjct: 150 ccttgtttggattgaagggagctctacatct 180



 Score = 50.1 bits (25), Expect = 8e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 133 ggataggcttgtggtttgcataactcaggagct 165
           |||||||||||||| ||||||| ||||||||||
Sbjct: 98  ggataggcttgtggcttgcatatctcaggagct 130



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 gtggagctccttgaagtccaa 41
          |||||||||||||||||||||
Sbjct: 3  gtggagctccttgaagtccaa 23




>40657_mtr-MIR159a:mirbase
          Length = 183

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 189 tttggattgaagggagctctacatct 214
           ||||||||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctctacatct 177




>39804_aly-MIR159a:mirbase
          Length = 222

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 189 tttggattgaagggagctctacatct 214
           ||||||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctacatct 208




>42695_zma-MIR159f:mirbase
          Length = 215

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 129 tttgggataggcttgtggtttgcataactcaggagctgca 168
           |||| |||||||||||||||||||| ||  ||||||||||
Sbjct: 133 tttgagataggcttgtggtttgcatgaccgaggagctgca 172




>42690_zma-MIR159a:mirbase
          Length = 246

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 129 tttgggataggcttgtggtttgcataactcaggagctgca 168
           |||| |||||||||||||||||||| ||  ||||||||||
Sbjct: 146 tttgagataggcttgtggtttgcatgaccgaggagctgca 185



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 189 tttggattgaagggagctctacatc 213
           |||||||||||||||||||| ||||
Sbjct: 207 tttggattgaagggagctctgcatc 231




>42494_sbi-MIR159:mirbase
          Length = 226

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 129 tttgggataggcttgtggtttgcataactcaggagctgca 168
           |||| |||||||||||||||||||| ||  ||||||||||
Sbjct: 143 tttgagataggcttgtggtttgcatgaccgaggagctgca 182



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 189 tttggattgaagggagctct 208
           ||||||||||||||||||||
Sbjct: 204 tttggattgaagggagctct 223




>42468_ssp-MIR159a:mirbase
          Length = 261

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 129 tttgggataggcttgtggtttgcataactcaggagctgca 168
           |||| |||||||||||||||||||| ||  ||||||||||
Sbjct: 162 tttgagataggcttgtggtttgcatgaccgaggagctgca 201



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 189 tttggattgaagggagctctacatc 213
           |||||||||||||||||||| ||||
Sbjct: 223 tttggattgaagggagctctgcatc 247




>42453_sof-MIR159b:mirbase
          Length = 266

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 129 tttgggataggcttgtggtttgcataactcaggagctgca 168
           |||| |||||||||||||||||||| ||  ||||||||||
Sbjct: 166 tttgagataggcttgtggtttgcatgaccgaggagctgca 205



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 189 tttggattgaagggagctctacatc 213
           |||||||||||||||||||| ||||
Sbjct: 227 tttggattgaagggagctctgcatc 251




>42452_sof-MIR159a:mirbase
          Length = 265

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 129 tttgggataggcttgtggtttgcataactcaggagctgca 168
           |||| |||||||||||||||||||| ||  ||||||||||
Sbjct: 165 tttgagataggcttgtggtttgcatgaccgaggagctgca 204



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 189 tttggattgaagggagctctacatc 213
           |||||||||||||||||||| ||||
Sbjct: 226 tttggattgaagggagctctgcatc 250




>40432_gma-MIR159a:mirbase
          Length = 214

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 184 ccttatttggattgaagggagctctaca 211
           |||| |||||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctaca 197



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 gtggagctccttgaagtccaa 41
          |||||||||||||||||||||
Sbjct: 20 gtggagctccttgaagtccaa 40




>41024_pvu-MIR159a:mirbase
          Length = 174

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 184 ccttatttggattgaagggagctctac 210
           |||| ||||||||||||||||||||||
Sbjct: 148 ccttctttggattgaagggagctctac 174



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 gtggagctccttgaagtccaa 41
          |||||||||||||||||||||
Sbjct: 1  gtggagctccttgaagtccaa 21




>41023_pvu-MIR159a:mirbase
          Length = 174

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 184 ccttatttggattgaagggagctctac 210
           |||| ||||||||||||||||||||||
Sbjct: 148 ccttctttggattgaagggagctctac 174



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 gtggagctccttgaagtccaa 41
          |||||||||||||||||||||
Sbjct: 1  gtggagctccttgaagtccaa 21




>40311_bra-MIR159a:mirbase
          Length = 185

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 189 tttggattgaagggagctctaca 211
           |||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185




>40261_bna-MIR159:mirbase
          Length = 183

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 189 tttggattgaagggagctctaca 211
           |||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183




>42691_zma-MIR159b:mirbase
          Length = 221

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 189 tttggattgaagggagctctacatct 214
           |||||||||||||||||||| |||||
Sbjct: 182 tttggattgaagggagctctgcatct 207




>41922_osa-MIR159f:mirbase
          Length = 188

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 190 ttggattgaagggagctctaca 211
           ||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180




>41918_osa-MIR159b:mirbase
          Length = 188

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 189 tttggattgaagggagctctacatct 214
           |||||||||||||||||||| |||||
Sbjct: 158 tttggattgaagggagctctgcatct 183




>41883_hvu-MIR159b:mirbase
          Length = 122

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 189 tttggattgaagggagctctacatct 214
           |||||||||||||||||||| |||||
Sbjct: 11  tttggattgaagggagctctgcatct 36




>41868_far-MIR159:mirbase
          Length = 200

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 189 tttggattgaagggagctctacatct 214
           |||||||||||||||||||| |||||
Sbjct: 169 tttggattgaagggagctctgcatct 194




>41218_csi-MIR159:mirbase
          Length = 216

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 gtggagctccttgaagtccaaa 42
          ||||||||||||||||||||||
Sbjct: 11 gtggagctccttgaagtccaaa 32



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 189 tttggattgaagggagctctac 210
           ||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207




>40017_ath-MIR159b:mirbase
          Length = 196

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 189 tttggattgaagggagctctacatct 214
           |||||||||||||||||||| |||||
Sbjct: 168 tttggattgaagggagctcttcatct 193




>40016_ath-MIR159a:mirbase
          Length = 184

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 189 tttggattgaagggagctctac 210
           ||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184




>39805_aly-MIR159b:mirbase
          Length = 202

 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 189 tttggattgaagggagctctacatct 214
           |||||||||||||||||||| |||||
Sbjct: 169 tttggattgaagggagctcttcatct 194




>42700_zma-MIR159k:mirbase
          Length = 200

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 138 ggcttgtggtttgcataactcaggagctgcatc 170
           |||||||||||||||| ||  ||||||||||||
Sbjct: 126 ggcttgtggtttgcatgaccgaggagctgcatc 158



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 189 tttggattgaagggagctct 208
           ||||||||||||||||||||
Sbjct: 179 tttggattgaagggagctct 198




>42456_sof-MIR159e:mirbase
          Length = 264

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 129 tttgggataggcttgtggtttgcat 153
           |||| ||||||||||||||||||||
Sbjct: 164 tttgagataggcttgtggtttgcat 188




>42455_sof-MIR159d:mirbase
          Length = 265

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 189 tttggattgaagggagctctacatc 213
           |||||||||||||||||||| ||||
Sbjct: 226 tttggattgaagggagctctgcatc 250




>41919_osa-MIR159c:mirbase
          Length = 197

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 190 ttggattgaagggagctctacatct 214
           |||||||||||||||||| ||||||
Sbjct: 168 ttggattgaagggagctccacatct 192




>41528_sly-MIR159:mirbase
          Length = 177

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 189 tttggattgaagggagctcta 209
           |||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 tggagctccttgaagtccaa 41
          ||||||||||||||||||||
Sbjct: 1  tggagctccttgaagtccaa 20




>41301_ptc-MIR159c:mirbase
          Length = 183

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 gtggagctccttgaagtccaa 41
          |||||||||||||||||||||
Sbjct: 10 gtggagctccttgaagtccaa 30



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 189 tttggattgaagggagctcta 209
           |||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174




>41300_ptc-MIR159b:mirbase
          Length = 187

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 gtggagctccttgaagtccaa 41
          |||||||||||||||||||||
Sbjct: 10 gtggagctccttgaagtccaa 30



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 189 tttggattgaagggagctcta 209
           |||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178




>41299_ptc-MIR159a:mirbase
          Length = 183

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 gtggagctccttgaagtccaa 41
          |||||||||||||||||||||
Sbjct: 10 gtggagctccttgaagtccaa 30



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 189 tttggattgaagggagctcta 209
           |||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174