miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41557_sly-MIR5301:mirbase
Length = 188
Score = 60.0 bits (30), Expect = 7e-10
Identities = 46/50 (92%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 133 ctactcctcccatacc-atgacttccactaacttctccctctcttgattt 181
|||||||||||||||| ||||||||||||| ||||||||| |||| ||||
Sbjct: 118 ctactcctcccatacccatgacttccactagcttctccctttcttcattt 167
Score = 58.0 bits (29), Expect = 3e-09
Identities = 48/53 (90%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 21 gaaagggatgaggatattgggaagttattgg-tgcgggtggggtggaaagatt 72
|||||||||||| |||||||||||| |||| || ||||||||||||||||||
Sbjct: 31 gaaagggatgagagtattgggaagttgttggttgtgggtggggtggaaagatt 83
