miRNEST 2.0, an integrative microRNA resource :: BLAST
>42594_sbi-MIR399f:mirbase
Length = 120
Score = 101 bits (51), Expect = 9e-23
Identities = 84/95 (88%)
Strand = Plus / Plus
Query: 6 gattactgggccatttctccttgggcagagtgatcaaacctcacattgctggatctgttt 65
|||||| |||||||||||||||||||||||| || || | || |||||||||| | ||
Sbjct: 16 gattaccgggccatttctccttgggcagagtaattgaattttactttgctggatccggtt 75
Query: 66 tgctctgccaaaggagatttgcccagcgatccaca 100
||||||||||||||||||||||||||| |||||||
Sbjct: 76 tgctctgccaaaggagatttgcccagcaatccaca 110
>42046_osa-MIR399f:mirbase
Length = 117
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 68 ctctgccaaaggagatttgcccagcgatccaca 100
||||||||||||||||||||||||| |||||||
Sbjct: 84 ctctgccaaaggagatttgcccagcaatccaca 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 6 gattactgggccatttctccttgggcagag 35
|||||| ||||||| |||||||||||||||
Sbjct: 6 gattaccgggccatgtctccttgggcagag 35
>42047_osa-MIR399g:mirbase
Length = 119
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 69 tctgccaaaggagatttgcccagcgat 95
|||||||||||||||||||||||||||
Sbjct: 87 tctgccaaaggagatttgcccagcgat 113
>40736_mtr-MIR399f:mirbase
Length = 104
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 69 tctgccaaaggagatttgcccagcgat 95
|||||||||||||||||||||||||||
Sbjct: 77 tctgccaaaggagatttgcccagcgat 103
>40735_mtr-MIR399e:mirbase
Length = 134
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 69 tctgccaaaggagatttgcccagcgat 95
|||||||||||||||||||||||||||
Sbjct: 93 tctgccaaaggagatttgcccagcgat 119
>40731_mtr-MIR399a:mirbase
Length = 134
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 69 tctgccaaaggagatttgcccagcgat 95
|||||||||||||||||||||||||||
Sbjct: 93 tctgccaaaggagatttgcccagcgat 119
>40387_rco-MIR399e:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 69 tctgccaaaggagatttgcccagc 92
||||||||||||||||||||||||
Sbjct: 81 tctgccaaaggagatttgcccagc 104
>42593_sbi-MIR399e:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 ctgccaaaggagatttgcccagc 92
|||||||||||||||||||||||
Sbjct: 86 ctgccaaaggagatttgcccagc 108
>42045_osa-MIR399e:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 ctgccaaaggagatttgcccagc 92
|||||||||||||||||||||||
Sbjct: 87 ctgccaaaggagatttgcccagc 109
>40737_mtr-MIR399g:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 ctgccaaaggagatttgcccagc 92
|||||||||||||||||||||||
Sbjct: 78 ctgccaaaggagatttgcccagc 100
>41672_vvi-MIR399e:mirbase
Length = 112
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 ctctgccaaaggagatttgccc 89
||||||||||||||||||||||
Sbjct: 79 ctctgccaaaggagatttgccc 100
>41147_tcc-MIR399b:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 ctctgccaaaggagatttgccc 89
||||||||||||||||||||||
Sbjct: 92 ctctgccaaaggagatttgccc 113
>40299_bna-MIR399:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 ctctgccaaaggagatttgccc 89
||||||||||||||||||||||
Sbjct: 78 ctctgccaaaggagatttgccc 99
>40097_ath-MIR399f:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 ctctgccaaaggagatttgccc 89
||||||||||||||||||||||
Sbjct: 85 ctctgccaaaggagatttgccc 106
>40096_ath-MIR399e:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 63 ttttgctctgccaaaggagatttgcc 88
|||| |||||||||||||||||||||
Sbjct: 71 ttttcctctgccaaaggagatttgcc 96
>40095_ath-MIR399d:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 ctctgccaaaggagatttgccc 89
||||||||||||||||||||||
Sbjct: 67 ctctgccaaaggagatttgccc 88
>39889_aly-MIR399f:mirbase
Length = 167
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 ctctgccaaaggagatttgccc 89
||||||||||||||||||||||
Sbjct: 109 ctctgccaaaggagatttgccc 130
>39888_aly-MIR399e:mirbase
Length = 191
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 63 ttttgctctgccaaaggagatttgcc 88
|||| |||||||||||||||||||||
Sbjct: 110 ttttcctctgccaaaggagatttgcc 135
>39887_aly-MIR399d:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 ctctgccaaaggagatttgccc 89
||||||||||||||||||||||
Sbjct: 81 ctctgccaaaggagatttgccc 102
>39884_aly-MIR399a:mirbase
Length = 162
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 ctctgccaaaggagatttgccc 89
||||||||||||||||||||||
Sbjct: 110 ctctgccaaaggagatttgccc 131
>41246_csi-MIR399a:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctgccaaaggagatttgccc 89
|||||||||||||||||||||
Sbjct: 112 tctgccaaaggagatttgccc 132
>41149_tcc-MIR399d:mirbase
Length = 136
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctgccaaaggagatttgccc 89
|||||||||||||||||||||
Sbjct: 94 tctgccaaaggagatttgccc 114
>41148_tcc-MIR399c:mirbase
Length = 141
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 ctctgccaaaggagatttgcccagc 92
||||||||| |||||||||||||||
Sbjct: 98 ctctgccaatggagatttgcccagc 122
>40385_rco-MIR399c:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 tgccaaaggagatttgcccagcgat 95
||||||||||||||||||| |||||
Sbjct: 71 tgccaaaggagatttgcccggcgat 95
>40092_ath-MIR399a:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tctgccaaaggagatttgccc 89
|||||||||||||||||||||
Sbjct: 91 tctgccaaaggagatttgccc 111
>41674_vvi-MIR399g:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 ctgccaaaggagatttgccc 89
||||||||||||||||||||
Sbjct: 82 ctgccaaaggagatttgccc 101
>41668_vvi-MIR399a:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 66 tgctctgccaaaggagatttgccc 89
||||||||||||||||| ||||||
Sbjct: 62 tgctctgccaaaggagaattgccc 85
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 ctgccaaaggagatttgccc 89
||||||||||||||||||||
Sbjct: 90 ctgccaaaggagatttgccc 109
>41153_tcc-MIR399h:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 ctgccaaaggagatttgccc 89
||||||||||||||||||||
Sbjct: 76 ctgccaaaggagatttgccc 95
>40384_rco-MIR399b:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 ctgccaaaggagatttgccc 89
||||||||||||||||||||
Sbjct: 80 ctgccaaaggagatttgccc 99
>39892_aly-MIR399i:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 ctgccaaaggagatttgccc 89
||||||||||||||||||||
Sbjct: 91 ctgccaaaggagatttgccc 110
>39890_aly-MIR399g:mirbase
Length = 157
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 ctgccaaaggagatttgccc 89
||||||||||||||||||||
Sbjct: 110 ctgccaaaggagatttgccc 129
