miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41636_vvi-MIR319c:mirbase
          Length = 182

 Score =  107 bits (54), Expect = 3e-24
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                       
Query: 108 agtaaatgattgaatgatgcgggagacaaattggatcttaagtgtcctgtatttggactg 167
           ||||||||||||||||||||||||||||||||||||||||||   |||||  ||||||||
Sbjct: 99  agtaaatgattgaatgatgcgggagacaaattggatcttaagctccctgtgcttggactg 158

                         
Query: 168 aagggagctccctt 181
           ||||||||||||||
Sbjct: 159 aagggagctccctt 172




>40367_rco-MIR319a:mirbase
          Length = 211

 Score =  107 bits (54), Expect = 3e-24
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                       
Query: 108 agtaaatgattgaatgatgcgggagacaaattggatcttaagtgtcctgtatttggactg 167
           ||||||||| ||||||||||||||||||||||| ||||||||  ||||||| ||||||||
Sbjct: 134 agtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtacttggactg 193

                         
Query: 168 aagggagctccctt 181
           ||||||||||||||
Sbjct: 194 aagggagctccctt 207



 Score = 69.9 bits (35), Expect = 7e-13
 Identities = 66/75 (88%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                      
Query: 8  aagagagctttcttcggtccactcacgggttacgataagatatcaattagctgccgactc 67
          ||||||||||||||| ||||||||| ||||  || || ||| | ||||||||||||||||
Sbjct: 3  aagagagctttcttcagtccactcatgggtggcggtaggattt-aattagctgccgactc 61

                         
Query: 68 attcacccaaatact 82
          ||||| |||||||||
Sbjct: 62 attcatccaaatact 76




>40464_gma-MIR319a:mirbase
          Length = 207

 Score =  105 bits (53), Expect = 1e-23
 Identities = 65/69 (94%)
 Strand = Plus / Plus

                                                                       
Query: 113 atgattgaatgatgcgggagacaaattggatcttaagtgtcctgtatttggactgaaggg 172
           |||| ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||
Sbjct: 122 atgagtgaatgatgcgggagacaaattgaatcttaagtttcctgtacttggactgaaggg 181

                    
Query: 173 agctccctt 181
           |||||||||
Sbjct: 182 agctccctt 190




>40465_gma-MIR319b:mirbase
          Length = 208

 Score =  103 bits (52), Expect = 5e-23
 Identities = 146/175 (83%), Gaps = 3/175 (1%)
 Strand = Plus / Plus

                                                                       
Query: 8   aagagagctttcttcggtccactcacgggttacgataagatatcaattagctgccgactc 67
           ||||||||||||||| ||||||| | |||| || ||||||| ||||||||||||||||||
Sbjct: 19  aagagagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgactc 78

                                                                       
Query: 68  attcacccaaatactaggccaaaatctgtttatag-tgcttagtaaatgattgaatgatg 126
           ||||| |||||| ||  |  |||    |   | || | || || |||||| |||||||||
Sbjct: 79  attcatccaaatgctgagtgaaagc--gaagaaagatactcagcaaatgagtgaatgatg 136

                                                                  
Query: 127 cgggagacaaattggatcttaagtgtcctgtatttggactgaagggagctccctt 181
           ||||||||||||||  |||||||| ||||||| ||||||||||||||||||||||
Sbjct: 137 cgggagacaaattgattcttaagtttcctgtacttggactgaagggagctccctt 191




>40704_mtr-MIR319b:mirbase
          Length = 180

 Score =  101 bits (51), Expect = 2e-22
 Identities = 66/71 (92%)
 Strand = Plus / Plus

                                                                       
Query: 111 aaatgattgaatgatgcgggagacaaattggatcttaagtgtcctgtatttggactgaag 170
           |||||| ||||||||||||||||||||||| ||||||||| |||| || |||||||||||
Sbjct: 107 aaatgagtgaatgatgcgggagacaaattgaatcttaagtttcctatacttggactgaag 166

                      
Query: 171 ggagctccctt 181
           |||||||||||
Sbjct: 167 ggagctccctt 177




>41404_ptc-MIR319a:mirbase
          Length = 188

 Score = 99.6 bits (50), Expect = 7e-22
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                       
Query: 108 agtaaatgattgaatgatgcgggagacaaattggatcttaagtgtcctgtatttggactg 167
           ||||||||| ||||||||||||||||||||||| ||| ||||  ||||||| ||||||||
Sbjct: 108 agtaaatgagtgaatgatgcgggagacaaattgaatcctaagcttcctgtacttggactg 167

                         
Query: 168 aagggagctccctt 181
           ||||||||||||||
Sbjct: 168 aagggagctccctt 181




>41282_ctr-MIR319:mirbase
          Length = 186

 Score = 95.6 bits (48), Expect = 1e-20
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                       
Query: 108 agtaaatgattgaatgatgcgggagacaaattggatcttaagtgtcctgtatttggactg 167
           ||||||||| ||||||||||||||||||||||| ||||||||  ||||||  ||||||||
Sbjct: 105 agtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtgcttggactg 164

                       
Query: 168 aagggagctccc 179
           ||||||||||||
Sbjct: 165 aagggagctccc 176




>41185_aqc-MIR319:mirbase
          Length = 177

 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                       
Query: 109 gtaaatgattgaatgatgcgggagacaaattggatcttaagtgtcctgtatttggactga 168
           |||||||| |||||||| |||||||  |||||||||||| |  || |||| |||||||||
Sbjct: 104 gtaaatgaatgaatgatccgggagattaattggatcttatgcttcttgtacttggactga 163

                       
Query: 169 agggagctccct 180
           ||||||||||||
Sbjct: 164 agggagctccct 175




>41405_ptc-MIR319b:mirbase
          Length = 185

 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                       
Query: 108 agtaaatgattgaatgatgcgggagacaaattggatcttaagtgtcctgtatttggactg 167
           ||||||||| ||| ||||||||||||||||||  |||||||   |||| |  ||||||||
Sbjct: 105 agtaaatgaatgagtgatgcgggagacaaattaaatcttaaacttcctatcattggactg 164

                         
Query: 168 aagggagctccctt 181
           ||||||||||||||
Sbjct: 165 aagggagctccctt 178




>40069_ath-MIR319a:mirbase
          Length = 176

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 110 taaatgattgaatgatgcgggagacaaattggatc 144
           ||||||| |||||||||||| ||||||||||||||
Sbjct: 104 taaatgaatgaatgatgcggtagacaaattggatc 138



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                          
Query: 50 tcaattagctgccgactcattcacccaaatac 81
          |||||||||| |||||||||||| ||||||||
Sbjct: 43 tcaattagcttccgactcattcatccaaatac 74




>39858_aly-MIR319a:mirbase
          Length = 221

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 110 taaatgattgaatgatgcgggagacaaattggatc 144
           ||||||| |||||||||||| ||||||||||||||
Sbjct: 127 taaatgaatgaatgatgcggtagacaaattggatc 161



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 51 caattagctgccgactcattcacccaaatac 81
          ||||||||| |||||||||||| ||||||||
Sbjct: 67 caattagcttccgactcattcatccaaatac 97




>42781_zma-MIR319b:mirbase
          Length = 213

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 52 aattagctgccgactcattcaccca 76
          |||||||||||||||||||||||||
Sbjct: 63 aattagctgccgactcattcaccca 87




>42563_sbi-MIR319:mirbase
          Length = 249

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 52 aattagctgccgactcattcaccca 76
          |||||||||||||||||||||||||
Sbjct: 75 aattagctgccgactcattcaccca 99




>41995_osa-MIR319b:mirbase
          Length = 197

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 52 aattagctgccgactcattcaccca 76
          |||||||||||||||||||||||||
Sbjct: 53 aattagctgccgactcattcaccca 77




>39859_aly-MIR319b:mirbase
          Length = 246

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 8  aagagagctttcttcggtccactca 32
          |||||||||||||||||||||||||
Sbjct: 39 aagagagctttcttcggtccactca 63



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 109 gtaaatgattgaatgatgcgggagacaaattg 140
           |||||||| ||||||||||| |||||||||||
Sbjct: 140 gtaaatgaatgaatgatgcgagagacaaattg 171




>42783_zma-MIR319d:mirbase
          Length = 212

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 53 attagctgccgactcattcaccca 76
          ||||||||||||||||||||||||
Sbjct: 63 attagctgccgactcattcaccca 86




>40070_ath-MIR319b:mirbase
          Length = 172

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 9  agagagctttcttcggtccactca 32
          ||||||||||||||||||||||||
Sbjct: 1  agagagctttcttcggtccactca 24



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 109 gtaaatgattgaatgatgcgggagacaaattg 140
           |||||||| ||||||||||| |||||||||||
Sbjct: 101 gtaaatgaatgaatgatgcgagagacaaattg 132




>41635_vvi-MIR319b:mirbase
          Length = 194

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 160 ttggactgaagggagctcccttatatt 186
           |||||||||||||||||||||| ||||
Sbjct: 163 ttggactgaagggagctcccttgtatt 189




>41544_sly-MIR319:mirbase
          Length = 168

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 152 tcctgtatttggactgaagggagctcc 178
           ||||||| |||||||||||||||||||
Sbjct: 142 tcctgtacttggactgaagggagctcc 168



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 50 tcaattagctgccgactcattcacccaaat 79
          |||||| |||||||||||||||| ||||||
Sbjct: 37 tcaatttgctgccgactcattcatccaaat 66




>41638_vvi-MIR319f:mirbase
          Length = 193

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 160 ttggactgaagggagctccctt 181
           ||||||||||||||||||||||
Sbjct: 162 ttggactgaagggagctccctt 183



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 53 attagctgccgactcattca 72
          ||||||||||||||||||||
Sbjct: 54 attagctgccgactcattca 73




>41407_ptc-MIR319d:mirbase
          Length = 193

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 160 ttggactgaagggagctccctt 181
           ||||||||||||||||||||||
Sbjct: 165 ttggactgaagggagctccctt 186



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 53 attagctgccgactcattca 72
          ||||||||||||||||||||
Sbjct: 54 attagctgccgactcattca 73




>41406_ptc-MIR319c:mirbase
          Length = 196

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 160 ttggactgaagggagctccctt 181
           ||||||||||||||||||||||
Sbjct: 168 ttggactgaagggagctccctt 189



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 8  aagagagctttcttcggtccactca 32
          ||||||||||||||| |||||||||
Sbjct: 9  aagagagctttcttcagtccactca 33



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 53 attagctgccgactcattca 72
          ||||||||||||||||||||
Sbjct: 54 attagctgccgactcattca 73




>40703_mtr-MIR319:mirbase
          Length = 207

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 160 ttggactgaagggagctccctt 181
           ||||||||||||||||||||||
Sbjct: 169 ttggactgaagggagctccctt 190




>40369_rco-MIR319c:mirbase
          Length = 188

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 160 ttggactgaagggagctccctt 181
           ||||||||||||||||||||||
Sbjct: 163 ttggactgaagggagctccctt 184




>39740_smo-MIR319:mirbase
          Length = 215

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 160 ttggactgaagggagctccctt 181
           ||||||||||||||||||||||
Sbjct: 186 ttggactgaagggagctccctt 207




>42642_tae-MIR319:mirbase
          Length = 211

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 ttggactgaagggagctccct 180
           |||||||||||||||||||||
Sbjct: 184 ttggactgaagggagctccct 204




>41770_bdi-MIR319:mirbase
          Length = 280

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 ttggactgaagggagctccct 180
           |||||||||||||||||||||
Sbjct: 226 ttggactgaagggagctccct 246




>41409_ptc-MIR319f:mirbase
          Length = 202

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 52 aattagctgccgactcattca 72
          |||||||||||||||||||||
Sbjct: 55 aattagctgccgactcattca 75




>40368_rco-MIR319b:mirbase
          Length = 179

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 ttggactgaagggagctccct 180
           |||||||||||||||||||||
Sbjct: 154 ttggactgaagggagctccct 174




>40071_ath-MIR319c:mirbase
          Length = 199

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 154 ctgtatttggactgaagggagctcc 178
           |||| ||||||||||||||||||||
Sbjct: 164 ctgtgtttggactgaagggagctcc 188




>39861_aly-MIR319d:mirbase
          Length = 267

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 154 ctgtatttggactgaagggagctcc 178
           |||| ||||||||||||||||||||
Sbjct: 198 ctgtgtttggactgaagggagctcc 222




>39860_aly-MIR319c:mirbase
          Length = 271

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 154 ctgtatttggactgaagggagctcc 178
           |||| ||||||||||||||||||||
Sbjct: 198 ctgtgtttggactgaagggagctcc 222




>41639_vvi-MIR319g:mirbase
          Length = 222

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 ttggactgaagggagctccc 179
           ||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211




>41637_vvi-MIR319e:mirbase
          Length = 107

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 tttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 76  tttggactgaagggagctcc 95




>41236_csi-MIR319:mirbase
          Length = 123

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 tttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 90  tttggactgaagggagctcc 109




>41129_tcc-MIR319:mirbase
          Length = 133

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 tttggactgaagggagctcc 178
           ||||||||||||||||||||
Sbjct: 93  tttggactgaagggagctcc 112




>39484_ppt-MIR319e:mirbase
          Length = 174

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 ttggactgaagggagctccc 179
           ||||||||||||||||||||
Sbjct: 148 ttggactgaagggagctccc 167




>39483_ppt-MIR319d:mirbase
          Length = 170

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 ttggactgaagggagctccc 179
           ||||||||||||||||||||
Sbjct: 146 ttggactgaagggagctccc 165




>39482_ppt-MIR319c:mirbase
          Length = 189

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 ttggactgaagggagctccc 179
           ||||||||||||||||||||
Sbjct: 155 ttggactgaagggagctccc 174




>39419_pta-MIR159c:mirbase
          Length = 85

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 160 ttggactgaagggagctcccttat 183
           ||||| ||||||||||||||||||
Sbjct: 50  ttggattgaagggagctcccttat 73