miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41320_ptc-MIR164e:mirbase
          Length = 155

 Score = 60.0 bits (30), Expect = 7e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 31 atggagaagcagggtacgtgcattactaactcat 64
          |||||||||||||| |||||||||||||||||||
Sbjct: 10 atggagaagcagggcacgtgcattactaactcat 43




>40345_rco-MIR164c:mirbase
          Length = 116

 Score = 60.0 bits (30), Expect = 7e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 31 atggagaagcagggtacgtgcattactaactcat 64
          |||||||||||||| |||||||||||||||||||
Sbjct: 5  atggagaagcagggcacgtgcattactaactcat 38



 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 156 ttcatgtgcccgtcttctccatcatgac 183
           ||||||||||||||||| ||||||||||
Sbjct: 89  ttcatgtgcccgtcttccccatcatgac 116




>41278_ctr-MIR164:mirbase
          Length = 297

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 31 atggagaagcagggtacgtgcattactaactca 63
          |||||||||||||| ||||||||||||||||||
Sbjct: 21 atggagaagcagggcacgtgcattactaactca 53



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 156 ttcatgtgcccgtcttctccatcatgacc 184
           ||||||||||| ||||| |||||||||||
Sbjct: 169 ttcatgtgcccttcttccccatcatgacc 197




>41221_csi-MIR164:mirbase
          Length = 278

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 31 atggagaagcagggtacgtgcattactaactca 63
          |||||||||||||| ||||||||||||||||||
Sbjct: 13 atggagaagcagggcacgtgcattactaactca 45



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 156 ttcatgtgcccgtcttctccatcatgacc 184
           ||||||||||| ||||| |||||||||||
Sbjct: 161 ttcatgtgcccttcttccccatcatgacc 189




>39817_aly-MIR164b:mirbase
          Length = 161

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                             
Query: 31 atggagaagcagggtacgtgcattactaactcatc 65
          |||||||||||||| ||||||||||||| ||||||
Sbjct: 2  atggagaagcagggcacgtgcattactagctcatc 36




>41581_vvi-MIR164c:mirbase
          Length = 97

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 31 atggagaagcagggtacgtgcattactaactcat 64
          |||||||||||||| ||||||||||||| |||||
Sbjct: 10 atggagaagcagggcacgtgcattactagctcat 43




>41317_ptc-MIR164b:mirbase
          Length = 162

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 31 atggagaagcagggtacgtgcattactaactcat 64
          |||||||||||||| ||||||| |||||||||||
Sbjct: 10 atggagaagcagggcacgtgcactactaactcat 43




>40665_mtr-MIR164b:mirbase
          Length = 144

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 31 atggagaagcagggtacgtgcattactaactcat 64
          |||||||||||||| ||||||| |||||||||||
Sbjct: 5  atggagaagcagggcacgtgcaatactaactcat 38




>40028_ath-MIR164b:mirbase
          Length = 153

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                            
Query: 31 atggagaagcagggtacgtgcattactaactcat 64
          |||||||||||||| ||||||||||||| |||||
Sbjct: 2  atggagaagcagggcacgtgcattactagctcat 35




>42710_zma-MIR164b:mirbase
          Length = 128

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 32 tggagaagcagggtacgtgcattac 56
          ||||||||||||| |||||||||||
Sbjct: 21 tggagaagcagggcacgtgcattac 45




>42503_sbi-MIR164:mirbase
          Length = 126

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 32 tggagaagcagggtacgtgcattac 56
          ||||||||||||| |||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattac 25




>41933_osa-MIR164c:mirbase
          Length = 119

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 32 tggagaagcagggtacgtgca 52
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggtacgtgca 31




>41932_osa-MIR164b:mirbase
          Length = 109

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 32 tggagaagcagggtacgtgcattac 56
          ||||||||||||| |||||||||||
Sbjct: 9  tggagaagcagggcacgtgcattac 33



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 156 ttcatgtgcccgtcttctcca 176
           |||||||||||||||||||||
Sbjct: 81  ttcatgtgcccgtcttctcca 101