miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41024_pvu-MIR159a:mirbase
          Length = 174

 Score =  335 bits (169), Expect = 7e-93
 Identities = 172/173 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60

                                                                       
Query: 61  gatcccacagttctacccatctgcatgttttgtggtagtcttgtggcttccatatctggg 120
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gatcccacagttctacccatcagcatgttttgtggtagtcttgtggcttccatatctggg 120

                                                                
Query: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctcta 173
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctcta 173




>41023_pvu-MIR159a:mirbase
          Length = 174

 Score =  335 bits (169), Expect = 7e-93
 Identities = 172/173 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60

                                                                       
Query: 61  gatcccacagttctacccatctgcatgttttgtggtagtcttgtggcttccatatctggg 120
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gatcccacagttctacccatcagcatgttttgtggtagtcttgtggcttccatatctggg 120

                                                                
Query: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctcta 173
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctcta 173




>40432_gma-MIR159a:mirbase
          Length = 214

 Score =  242 bits (122), Expect = 7e-65
 Identities = 163/176 (92%), Gaps = 3/176 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 20  gtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatg 79

                                                                       
Query: 61  gatcccacagttctacccatctgcatg---ttttgtggtagtcttgtggcttccatatct 117
           |||||||||||||||||||||   | |   |||||||||||||||||||||||||||| |
Sbjct: 80  gatcccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatattt 139

                                                                   
Query: 118 ggggagcttcatctgcctctatagtatcatccttctttggattgaagggagctcta 173
           |||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||
Sbjct: 140 ggggagcttcatttgcctttatagtattaaccttctttggattgaagggagctcta 195




>40435_gma-MIR159d:mirbase
          Length = 103

 Score =  129 bits (65), Expect = 8e-31
 Identities = 94/103 (91%), Gaps = 3/103 (2%)
 Strand = Plus / Plus

                                                                       
Query: 36  gggtggattgagctgcttagctatggatcccacagttctacccatctgcatgt---tttg 92
           ||||| ||||||||||||||||||||||||||||||||||||||||   | ||   ||||
Sbjct: 1   gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60

                                                      
Query: 93  tggtagtcttgtggcttccatatctggggagcttcatctgcct 135
           ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61  tggtagtcttgtggcttccatatctggggagcttcatttgcct 103




>40338_rco-MIR159:mirbase
          Length = 180

 Score = 99.6 bits (50), Expect = 7e-22
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                      
Query: 1  gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
          |||||||||||||||||||||| |||||||||  ||||| |||||||||||| |||||||
Sbjct: 3  gtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatg 62

                    
Query: 61 gatcccacag 70
          ||||||||||
Sbjct: 63 gatcccacag 72



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 146 atccttctttggattgaagggagctcta 173
           |||||| |||||||||||||||||||||
Sbjct: 148 atccttgtttggattgaagggagctcta 175




>40397_ahy-MIR159:mirbase
          Length = 197

 Score = 95.6 bits (48), Expect = 1e-20
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                      
Query: 1  gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
          |||||||||||||||||||||  |||| ||||  ||||| |||||||||||| |||||||
Sbjct: 2  gtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatg 61

                              
Query: 61 gatcccacagttctacccat 80
          ||||||||||| ||||||||
Sbjct: 62 gatcccacagtactacccat 81



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 146 atccttctttggattgaagggagctcta 173
           |||||| |||||||||||||||||||||
Sbjct: 150 atccttatttggattgaagggagctcta 177




>41572_vvi-MIR159c:mirbase
          Length = 190

 Score = 91.7 bits (46), Expect = 2e-19
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                      
Query: 1  gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
          |||||||||||||||||||||| |||| ||||||||||| |||||||||||| |  ||||
Sbjct: 8  gtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatg 67

                    
Query: 61 gatcccacag 70
          ||||||||||
Sbjct: 68 gatcccacag 77



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 146 atccttctttggattgaagggagctcta 173
           |||||| |||||||||||||||||||||
Sbjct: 153 atccttgtttggattgaagggagctcta 180




>41301_ptc-MIR159c:mirbase
          Length = 183

 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                      
Query: 1  gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
          |||||||||||||||||||||| |||| |||| |||||| |||| ||||||| |||||||
Sbjct: 10 gtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69

               
Query: 61 gatcc 65
          |||||
Sbjct: 70 gatcc 74



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 153 tttggattgaagggagctcta 173
           |||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174




>41299_ptc-MIR159a:mirbase
          Length = 183

 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                      
Query: 1  gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
          |||||||||||||||||||||| |||| |||| |||||| |||| ||||||| |||||||
Sbjct: 10 gtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69

               
Query: 61 gatcc 65
          |||||
Sbjct: 70 gatcc 74



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 153 tttggattgaagggagctcta 173
           |||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174




>40657_mtr-MIR159a:mirbase
          Length = 183

 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 109/131 (83%), Gaps = 8/131 (6%)
 Strand = Plus / Plus

                                                                       
Query: 45  gagctgcttagctatggatcccacagttctacccatctgcatgt--tttgtggtagtctt 102
           ||||||||||||||||| |||| ||  |||||||||||   |||  ||||||||||| ||
Sbjct: 48  gagctgcttagctatgggtccctcaactctacccatct---tgttctttgtggtagtttt 104

                                                                       
Query: 103 gtggcttccatatctggggagcttcatctgcctctatagtatcatccttctttggattga 162
           ||||||||||||||| |||||| | ||   |  || |||| | ||| |||||||||||||
Sbjct: 105 gtggcttccatatctagggagccttat---cacctttagtttaatctttctttggattga 161

                      
Query: 163 agggagctcta 173
           |||||||||||
Sbjct: 162 agggagctcta 172




>41300_ptc-MIR159b:mirbase
          Length = 187

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                      
Query: 1  gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
          |||||||||||||||||||||| || | || | |||||| ||| |||||||| |||||||
Sbjct: 10 gtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatg 69

                    
Query: 61 gatcccacag 70
           |||||||||
Sbjct: 70 aatcccacag 79



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 153 tttggattgaagggagctcta 173
           |||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178




>41218_csi-MIR159:mirbase
          Length = 216

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 62/72 (86%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  gtggagctccttgaagtccaattgaggatcttact-gggtggattgagctgcttagctat 59
          |||||||||||||||||||||  |||| |||  |  ||||  ||||||||||| ||||||
Sbjct: 11 gtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctat 70

                      
Query: 60 ggatcccacagt 71
          ||||||||||||
Sbjct: 71 ggatcccacagt 82



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 153 tttggattgaagggagctcta 173
           |||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctcta 206




>40311_bra-MIR159a:mirbase
          Length = 185

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 149 cttctttggattgaagggagctcta 173
           |||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctcta 183




>40261_bna-MIR159:mirbase
          Length = 183

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 149 cttctttggattgaagggagctcta 173
           |||||||||||||||||||||||||
Sbjct: 157 cttctttggattgaagggagctcta 181




>40016_ath-MIR159a:mirbase
          Length = 184

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 149 cttctttggattgaagggagctcta 173
           |||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctcta 183




>39804_aly-MIR159a:mirbase
          Length = 222

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 149 cttctttggattgaagggagctcta 173
           |||||||||||||||||||||||||
Sbjct: 179 cttctttggattgaagggagctcta 203




>40017_ath-MIR159b:mirbase
          Length = 196

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 149 cttctttggattgaagggagctct 172
           ||||||||||||||||||||||||
Sbjct: 164 cttctttggattgaagggagctct 187




>39805_aly-MIR159b:mirbase
          Length = 202

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 149 cttctttggattgaagggagctct 172
           ||||||||||||||||||||||||
Sbjct: 165 cttctttggattgaagggagctct 188




>42695_zma-MIR159f:mirbase
          Length = 215

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 151 tctttggattgaagggagctct 172
           ||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213




>42690_zma-MIR159a:mirbase
          Length = 246

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 151 tctttggattgaagggagctct 172
           ||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226




>42635_tae-MIR159b:mirbase
          Length = 255

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 151 tctttggattgaagggagctct 172
           ||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249