miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41024_pvu-MIR159a:mirbase
          Length = 174

 Score =  337 bits (170), Expect = 2e-93
 Identities = 173/174 (99%)
 Strand = Plus / Plus

                                                                       
Query: 6   gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60

                                                                       
Query: 66  gatcccacagttctacccatctgcatgttttgtggtagtcttgtggcttccatatctggg 125
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gatcccacagttctacccatcagcatgttttgtggtagtcttgtggcttccatatctggg 120

                                                                 
Query: 126 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 174




>41023_pvu-MIR159a:mirbase
          Length = 174

 Score =  337 bits (170), Expect = 2e-93
 Identities = 173/174 (99%)
 Strand = Plus / Plus

                                                                       
Query: 6   gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60

                                                                       
Query: 66  gatcccacagttctacccatctgcatgttttgtggtagtcttgtggcttccatatctggg 125
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gatcccacagttctacccatcagcatgttttgtggtagtcttgtggcttccatatctggg 120

                                                                 
Query: 126 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 174




>40432_gma-MIR159a:mirbase
          Length = 214

 Score =  246 bits (124), Expect = 5e-66
 Identities = 165/178 (92%), Gaps = 3/178 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   agtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctat 64
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 19  agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78

                                                                       
Query: 65  ggatcccacagttctacccatctgcatg---ttttgtggtagtcttgtggcttccatatc 121
           ||||||||||||||||||||||   | |   |||||||||||||||||||||||||||| 
Sbjct: 79  ggatcccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatt 138

                                                                     
Query: 122 tggggagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 179
           ||||||||||||| ||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 139 tggggagcttcatttgcctttatagtattaaccttctttggattgaagggagctctac 196




>40435_gma-MIR159d:mirbase
          Length = 103

 Score =  129 bits (65), Expect = 8e-31
 Identities = 94/103 (91%), Gaps = 3/103 (2%)
 Strand = Plus / Plus

                                                                       
Query: 41  gggtggattgagctgcttagctatggatcccacagttctacccatctgcatgt---tttg 97
           ||||| ||||||||||||||||||||||||||||||||||||||||   | ||   ||||
Sbjct: 1   gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60

                                                      
Query: 98  tggtagtcttgtggcttccatatctggggagcttcatctgcct 140
           ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61  tggtagtcttgtggcttccatatctggggagcttcatttgcct 103




>40338_rco-MIR159:mirbase
          Length = 180

 Score =  103 bits (52), Expect = 4e-23
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                      
Query: 4  gagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagcta 63
          |||||||||||||||||||||||| |||||||||  ||||| |||||||||||| |||||
Sbjct: 1  gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60

                      
Query: 64 tggatcccacag 75
          ||||||||||||
Sbjct: 61 tggatcccacag 72




>41572_vvi-MIR159c:mirbase
          Length = 190

 Score = 99.6 bits (50), Expect = 7e-22
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                      
Query: 2  tggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagc 61
          |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| |  
Sbjct: 4  tggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgact 63

                        
Query: 62 tatggatcccacag 75
          ||||||||||||||
Sbjct: 64 tatggatcccacag 77



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 151 atccttctttggattgaagggagctctac 179
           |||||| ||||||||||||||||||||||
Sbjct: 153 atccttgtttggattgaagggagctctac 181




>40397_ahy-MIR159:mirbase
          Length = 197

 Score = 97.6 bits (49), Expect = 3e-21
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                      
Query: 5  agtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctat 64
          ||||||||||||||||||||||  |||| ||||  ||||| |||||||||||| ||||||
Sbjct: 1  agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60

                               
Query: 65 ggatcccacagttctacccat 85
          |||||||||||| ||||||||
Sbjct: 61 ggatcccacagtactacccat 81



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 151 atccttctttggattgaagggagctctac 179
           |||||| ||||||||||||||||||||||
Sbjct: 150 atccttatttggattgaagggagctctac 178




>41301_ptc-MIR159c:mirbase
          Length = 183

 Score = 87.7 bits (44), Expect = 3e-18
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                      
Query: 3  ggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagct 62
          ||||||||||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||
Sbjct: 7  ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66

                  
Query: 63 atggatcc 70
          ||||||||
Sbjct: 67 atggatcc 74



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 tttggattgaagggagctcta 178
           |||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174




>41299_ptc-MIR159a:mirbase
          Length = 183

 Score = 87.7 bits (44), Expect = 3e-18
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                      
Query: 3  ggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagct 62
          ||||||||||||||||||||||||| |||| |||| |||||| |||| ||||||| ||||
Sbjct: 7  ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66

                  
Query: 63 atggatcc 70
          ||||||||
Sbjct: 67 atggatcc 74



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 tttggattgaagggagctcta 178
           |||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174




>41300_ptc-MIR159b:mirbase
          Length = 187

 Score = 77.8 bits (39), Expect = 3e-15
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1  atggagtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttag 60
          ||||||||||||||||||||||||||| || | || | |||||| ||| |||||||| ||
Sbjct: 5  atggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgag 64

                         
Query: 61 ctatggatcccacag 75
          ||||| |||||||||
Sbjct: 65 ctatgaatcccacag 79



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 tttggattgaagggagctcta 178
           |||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178




>40657_mtr-MIR159a:mirbase
          Length = 183

 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 110/132 (83%), Gaps = 8/132 (6%)
 Strand = Plus / Plus

                                                                       
Query: 50  gagctgcttagctatggatcccacagttctacccatctgcatgt--tttgtggtagtctt 107
           ||||||||||||||||| |||| ||  |||||||||||   |||  ||||||||||| ||
Sbjct: 48  gagctgcttagctatgggtccctcaactctacccatct---tgttctttgtggtagtttt 104

                                                                       
Query: 108 gtggcttccatatctggggagcttcatctgcctctatagtatcatccttctttggattga 167
           ||||||||||||||| |||||| | ||   |  || |||| | ||| |||||||||||||
Sbjct: 105 gtggcttccatatctagggagccttat---cacctttagtttaatctttctttggattga 161

                       
Query: 168 agggagctctac 179
           ||||||||||||
Sbjct: 162 agggagctctac 173




>41218_csi-MIR159:mirbase
          Length = 216

 Score = 61.9 bits (31), Expect = 2e-10
 Identities = 65/75 (86%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                      
Query: 3  ggagtggagctccttgaagtccaattgaggatcttact-gggtggattgagctgcttagc 61
          ||||||||||||||||||||||||  |||| |||  |  ||||  ||||||||||| |||
Sbjct: 8  ggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagc 67

                         
Query: 62 tatggatcccacagt 76
          |||||||||||||||
Sbjct: 68 tatggatcccacagt 82



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 158 tttggattgaagggagctctac 179
           ||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207




>40311_bra-MIR159a:mirbase
          Length = 185

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 154 cttctttggattgaagggagctctac 179
           ||||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctctac 184




>40261_bna-MIR159:mirbase
          Length = 183

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 154 cttctttggattgaagggagctctac 179
           ||||||||||||||||||||||||||
Sbjct: 157 cttctttggattgaagggagctctac 182




>40016_ath-MIR159a:mirbase
          Length = 184

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 154 cttctttggattgaagggagctctac 179
           ||||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctctac 184




>39804_aly-MIR159a:mirbase
          Length = 222

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 154 cttctttggattgaagggagctctac 179
           ||||||||||||||||||||||||||
Sbjct: 179 cttctttggattgaagggagctctac 204




>40017_ath-MIR159b:mirbase
          Length = 196

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 154 cttctttggattgaagggagctct 177
           ||||||||||||||||||||||||
Sbjct: 164 cttctttggattgaagggagctct 187




>39805_aly-MIR159b:mirbase
          Length = 202

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 154 cttctttggattgaagggagctct 177
           ||||||||||||||||||||||||
Sbjct: 165 cttctttggattgaagggagctct 188