miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39385_pab-MIR482c:mirbase
Length = 137
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 ttgtggatggaagtcttgaggagtgggagcagaggataagactgctgctttgaatattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 ttgtggatggaagtcttgaggagtgggagcagaggataagactgctgctttgaatattat 81
Query: 61 cagtctttcctactcctcccattcctattggcttcaccacaca 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 cagtctttcctactcctcccattcctattggcttcaccacaca 124
>41687_vvi-MIR482:mirbase
Length = 117
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 62 agtctttcctactcctcccattcctattg 90
|||||||||||||||||||||||||||||
Sbjct: 84 agtctttcctactcctcccattcctattg 112
>39383_pab-MIR482a:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 61 cagtctttcctactcctcccattcctattggcttcaccaca 101
||||||| |||||||||||||||||| ||| ||||| ||||
Sbjct: 75 cagtcttccctactcctcccattcctgttgccttcatcaca 115
>39384_pab-MIR482b:mirbase
Length = 121
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 tgtggatggaagtcttgaggagtgggag 29
||||||||||||||||||||| ||||||
Sbjct: 2 tgtggatggaagtcttgaggattgggag 29
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 62 agtctttcctactcctcccattcctattggcttcaccacaca 103
|||||| |||| ||||||||||||||||| || || ||||||
Sbjct: 74 agtcttccctattcctcccattcctattgcctccatcacaca 115
>39430_pta-MIR482b:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 61 cagtctttcctactcctcccattcct 86
||||||| ||||||||||||||||||
Sbjct: 66 cagtcttccctactcctcccattcct 91
>39429_pta-MIR482a:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 61 cagtctttcctactcctcccattcct 86
||||||| ||||||||||||||||||
Sbjct: 66 cagtcttccctactcctcccattcct 91
>39431_pta-MIR482c:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 59 atcagtctttcctactcctcccattcct 86
||||||||| |||| |||||||||||||
Sbjct: 53 atcagtcttccctattcctcccattcct 80
