miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39428_pta-MIR408:mirbase
          Length = 86

 Score =  155 bits (78), Expect = 7e-39
 Identities = 84/86 (97%)
 Strand = Plus / Plus

                                                                      
Query: 9  gagacagggatgagttagggcatgggagttgcatatgcagaaacgtctgcttctgccatt 68
          |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gagacagggacgagttagggcatgggagttgcatatgcagaaacgtctgcttctgccatt 60

                                    
Query: 69 ctcatgcactgcctcttccctggctc 94
          || |||||||||||||||||||||||
Sbjct: 61 cttatgcactgcctcttccctggctc 86




>40405_ahy-MIR408:mirbase
          Length = 122

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 69  ctcatgcactgcctcttccctggctc 94
           ||||||||||||||||||||||||||
Sbjct: 78  ctcatgcactgcctcttccctggctc 103




>40404_ahy-MIR408:mirbase
          Length = 122

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 69  ctcatgcactgcctcttccctggctc 94
           ||||||||||||||||||||||||||
Sbjct: 78  ctcatgcactgcctcttccctggctc 103




>39490_ppt-MIR408b:mirbase
          Length = 144

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 69  ctcatgcactgcctcttccctggct 93
           |||||||||||||||||||||||||
Sbjct: 90  ctcatgcactgcctcttccctggct 114




>41683_vvi-MIR408:mirbase
          Length = 107

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 71 catgcactgcctcttccctggctc 94
          ||||||||||||||||||||||||
Sbjct: 76 catgcactgcctcttccctggctc 99




>41252_csi-MIR408:mirbase
          Length = 153

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 71  catgcactgcctcttccctggctc 94
           ||||||||||||||||||||||||
Sbjct: 119 catgcactgcctcttccctggctc 142




>40108_ath-MIR408:mirbase
          Length = 218

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 71  catgcactgcctcttccctggctc 94
           ||||||||||||||||||||||||
Sbjct: 119 catgcactgcctcttccctggctc 142




>39897_aly-MIR408:mirbase
          Length = 211

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 71  catgcactgcctcttccctggctc 94
           ||||||||||||||||||||||||
Sbjct: 116 catgcactgcctcttccctggctc 139




>41463_ptc-MIR408:mirbase
          Length = 105

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 71 catgcactgcctcttccctggct 93
          |||||||||||||||||||||||
Sbjct: 75 catgcactgcctcttccctggct 97




>41193_aqc-MIR408:mirbase
          Length = 87

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 71 catgcactgcctcttccctggct 93
          |||||||||||||||||||||||
Sbjct: 23 catgcactgcctcttccctggct 1




>42830_zma-MIR408b:mirbase
          Length = 147

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 73  tgcactgcctcttccctggctc 94
           ||||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggctc 147




>42829_zma-MIR408:mirbase
          Length = 191

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 73  tgcactgcctcttccctggctc 94
           ||||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggctc 174




>42647_tae-MIR408:mirbase
          Length = 187

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 73  tgcactgcctcttccctggctc 94
           ||||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggctc 158




>42474_ssp-MIR408d:mirbase
          Length = 180

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 73  tgcactgcctcttccctggctc 94
           ||||||||||||||||||||||
Sbjct: 159 tgcactgcctcttccctggctc 180




>42473_ssp-MIR408a:mirbase
          Length = 248

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 73  tgcactgcctcttccctggctc 94
           ||||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggctc 248




>42465_sof-MIR408d:mirbase
          Length = 215

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 73  tgcactgcctcttccctggctc 94
           ||||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggctc 198




>42464_sof-MIR408c:mirbase
          Length = 286

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 73  tgcactgcctcttccctggctc 94
           ||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctc 269




>42463_sof-MIR408b:mirbase
          Length = 286

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 73  tgcactgcctcttccctggctc 94
           ||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctc 269




>42462_sof-MIR408a:mirbase
          Length = 283

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 73  tgcactgcctcttccctggctc 94
           ||||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggctc 266




>42052_osa-MIR408:mirbase
          Length = 213

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 73  tgcactgcctcttccctggctc 94
           ||||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggctc 175




>39742_smo-MIR408:mirbase
          Length = 109

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 72 atgcactgcctcttccctggct 93
          ||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97




>42600_sbi-MIR408:mirbase
          Length = 205

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 73  tgcactgcctcttccctggct 93
           |||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205




>40391_rco-MIR408:mirbase
          Length = 92

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 73 tgcactgcctcttccctggct 93
          |||||||||||||||||||||
Sbjct: 68 tgcactgcctcttccctggct 88