miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41356_ptc-MIR169b:mirbase
          Length = 113

 Score =  167 bits (84), Expect = 3e-42
 Identities = 110/119 (92%), Gaps = 6/119 (5%)
 Strand = Plus / Plus

                                                                       
Query: 20  aagattgatgcagccaaggatgacttgccgacgactcgcttttgcttttgcttccatcaa 79
           |||||||||||||||||||||||||||||||||||||| |||||||||      ||||||
Sbjct: 1   aagattgatgcagccaaggatgacttgccgacgactcgtttttgcttt------catcaa 54

                                                                      
Query: 80  tataggcataatcaagaagagatgaatccgttggcaggttgttcttggctacatttttc 138
           |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55  tatacgcataattaagaagagatgaatccgttggcaggttgttcttggctacatttttc 113




>41357_ptc-MIR169c:mirbase
          Length = 102

 Score = 65.9 bits (33), Expect = 8e-12
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 24 ttgatgcagccaaggatgacttgccgacgactc 56
          |||||||||||||||||||||||||||||||||
Sbjct: 5  ttgatgcagccaaggatgacttgccgacgactc 37



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 94  agaagagatgaatccgttggcaggttgttcttggctacatttt 136
           |||||||||||||  ||||||||||| | ||||||||||||||
Sbjct: 58  agaagagatgaataggttggcaggttttccttggctacatttt 100




>41102_tcc-MIR169a:mirbase
          Length = 147

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 112 ggcaggttgttcttggctacatttttctttctgctcc 148
           |||||||||| ||||||||||| ||||||||||||||
Sbjct: 109 ggcaggttgtccttggctacatgtttctttctgctcc 145



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tgcagccaaggatgacttgccga 50
          |||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccga 41




>41349_ptc-MIR169a:mirbase
          Length = 165

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 27 atgcagccaaggatgacttgccgac 51
          |||||||||||||||||||||||||
Sbjct: 8  atgcagccaaggatgacttgccgac 32




>41104_tcc-MIR169c:mirbase
          Length = 142

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 28 tgcagccaaggatgacttgccgacgactc 56
          |||||||||||||||||||||||| ||||
Sbjct: 19 tgcagccaaggatgacttgccgactactc 47



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 124 ttggctacatttttctttctgctcctc 150
           |||||||||||||||||||| ||||||
Sbjct: 116 ttggctacatttttctttctcctcctc 142




>40679_mtr-MIR169b:mirbase
          Length = 121

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 27 atgcagccaaggatgacttgccgac 51
          |||||||||||||||||||||||||
Sbjct: 18 atgcagccaaggatgacttgccgac 42




>40678_mtr-MIR169a:mirbase
          Length = 121

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 27 atgcagccaaggatgacttgccgac 51
          |||||||||||||||||||||||||
Sbjct: 18 atgcagccaaggatgacttgccgac 42




>40449_gma-MIR169a:mirbase
          Length = 121

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 25 tgatgcagccaaggatgacttgccg 49
          |||||||||||||||||||||||||
Sbjct: 16 tgatgcagccaaggatgacttgccg 40




>42745_zma-MIR169c:mirbase
          Length = 134

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 26 gatgcagccaaggatgacttgccg 49
          ||||||||||||||||||||||||
Sbjct: 17 gatgcagccaaggatgacttgccg 40




>41979_osa-MIR169p:mirbase
          Length = 126

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 26  gatgcagccaaggatgacttgccg 49
           ||||||||||||||||||||||||
Sbjct: 120 gatgcagccaaggatgacttgccg 97




>41966_osa-MIR169c:mirbase
          Length = 112

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 26 gatgcagccaaggatgacttgccg 49
          ||||||||||||||||||||||||
Sbjct: 7  gatgcagccaaggatgacttgccg 30




>41758_bdi-MIR169f:mirbase
          Length = 151

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 26 gatgcagccaaggatgacttgccg 49
          ||||||||||||||||||||||||
Sbjct: 29 gatgcagccaaggatgacttgccg 52




>41755_bdi-MIR169c:mirbase
          Length = 151

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 26 gatgcagccaaggatgacttgccg 49
          ||||||||||||||||||||||||
Sbjct: 29 gatgcagccaaggatgacttgccg 52




>41603_vvi-MIR169g:mirbase
          Length = 121

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 28 tgcagccaaggatgacttgccgac 51
          ||||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccgac 34




>42744_zma-MIR169b:mirbase
          Length = 156

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tgcagccaaggatgacttgccga 50
          |||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccga 41




>42743_zma-MIR169a:mirbase
          Length = 130

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tgcagccaaggatgacttgccga 50
          |||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccga 41




>41965_osa-MIR169b:mirbase
          Length = 128

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 27 atgcagccaaggatgacttgccg 49
          |||||||||||||||||||||||
Sbjct: 8  atgcagccaaggatgacttgccg 30




>41964_osa-MIR169a:mirbase
          Length = 173

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tgcagccaaggatgacttgccga 50
          |||||||||||||||||||||||
Sbjct: 36 tgcagccaaggatgacttgccga 58



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 110 ttggcaggttgttcttggctacat 133
           |||||| |||||||||||||||||
Sbjct: 112 ttggcaagttgttcttggctacat 135




>41602_vvi-MIR169f:mirbase
          Length = 184

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tgcagccaaggatgacttgccga 50
          |||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccga 33




>41599_vvi-MIR169c:mirbase
          Length = 90

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 27 atgcagccaaggatgacttgccg 49
          |||||||||||||||||||||||
Sbjct: 10 atgcagccaaggatgacttgccg 32




>41597_vvi-MIR169a:mirbase
          Length = 124

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 27 atgcagccaaggatgacttgccg 49
          |||||||||||||||||||||||
Sbjct: 10 atgcagccaaggatgacttgccg 32




>41536_sly-MIR169c:mirbase
          Length = 147

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tgcagccaaggatgacttgccga 50
          |||||||||||||||||||||||
Sbjct: 39 tgcagccaaggatgacttgccga 61




>41361_ptc-MIR169g:mirbase
          Length = 106

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 27 atgcagccaaggatgacttgccg 49
          |||||||||||||||||||||||
Sbjct: 8  atgcagccaaggatgacttgccg 30




>41358_ptc-MIR169d:mirbase
          Length = 111

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 27 atgcagccaaggatgacttgccg 49
          |||||||||||||||||||||||
Sbjct: 8  atgcagccaaggatgacttgccg 30




>41176_aqc-MIR169c:mirbase
          Length = 111

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 27 atgcagccaaggatgacttgccg 49
          |||||||||||||||||||||||
Sbjct: 2  atgcagccaaggatgacttgccg 24




>41106_tcc-MIR169e:mirbase
          Length = 147

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tgcagccaaggatgacttgccga 50
          |||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccga 41



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 112 ggcaggttgttcttggctacatttttctttctgctcc 148
           |||| ||||| ||||||||||| ||||||| ||||||
Sbjct: 109 ggcaagttgtccttggctacatgtttctttttgctcc 145




>40684_mtr-MIR169g:mirbase
          Length = 211

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 27 atgcagccaaggatgacttgccg 49
          |||||||||||||||||||||||
Sbjct: 3  atgcagccaaggatgacttgccg 25




>40450_gma-MIR169b:mirbase
          Length = 183

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tgcagccaaggatgacttgccga 50
          |||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccga 31




>40273_bna-MIR169b:mirbase
          Length = 188

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tgcagccaaggatgacttgccga 50
          |||||||||||||||||||||||
Sbjct: 16 tgcagccaaggatgacttgccga 38




>40272_bna-MIR169a:mirbase
          Length = 132

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tgcagccaaggatgacttgccga 50
          |||||||||||||||||||||||
Sbjct: 17 tgcagccaaggatgacttgccga 39




>40046_ath-MIR169b:mirbase
          Length = 181

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 27 atgcagccaaggatgacttgccg 49
          |||||||||||||||||||||||
Sbjct: 40 atgcagccaaggatgacttgccg 62




>40045_ath-MIR169a:mirbase
          Length = 226

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tgcagccaaggatgacttgccga 50
          |||||||||||||||||||||||
Sbjct: 16 tgcagccaaggatgacttgccga 38




>39835_aly-MIR169b:mirbase
          Length = 173

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 27 atgcagccaaggatgacttgccg 49
          |||||||||||||||||||||||
Sbjct: 43 atgcagccaaggatgacttgccg 65




>39834_aly-MIR169a:mirbase
          Length = 263

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tgcagccaaggatgacttgccga 50
          |||||||||||||||||||||||
Sbjct: 25 tgcagccaaggatgacttgccga 47




>41619_vvi-MIR169w:mirbase
          Length = 143

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 28 tgcagccaaggatgacttgccg 49
          ||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32




>41615_vvi-MIR169s:mirbase
          Length = 99

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 28 tgcagccaaggatgacttgccg 49
          ||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32




>41607_vvi-MIR169k:mirbase
          Length = 122

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 28 tgcagccaaggatgacttgccg 49
          ||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32




>41606_vvi-MIR169j:mirbase
          Length = 122

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 28 tgcagccaaggatgacttgccg 49
          ||||||||||||||||||||||
Sbjct: 11 tgcagccaaggatgacttgccg 32




>41534_sly-MIR169a:mirbase
          Length = 149

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 28 tgcagccaaggatgacttgccg 49
          ||||||||||||||||||||||
Sbjct: 39 tgcagccaaggatgacttgccg 60




>41360_ptc-MIR169f:mirbase
          Length = 239

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 28 tgcagccaaggatgacttgccg 49
          ||||||||||||||||||||||
Sbjct: 9  tgcagccaaggatgacttgccg 30




>41113_tcc-MIR169l:mirbase
          Length = 122

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 28 tgcagccaaggatgacttgccg 49
          ||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40




>41112_tcc-MIR169k:mirbase
          Length = 132

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 28 tgcagccaaggatgacttgccg 49
          ||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40




>41103_tcc-MIR169b:mirbase
          Length = 193

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 28 tgcagccaaggatgacttgccg 49
          ||||||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccg 40




>40687_mtr-MIR169j:mirbase
          Length = 77

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 28 tgcagccaaggatgacttgccg 49
          ||||||||||||||||||||||
Sbjct: 4  tgcagccaaggatgacttgccg 25




>40451_gma-MIR169c:mirbase
          Length = 115

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 26 gatgcagccaaggatgacttgccgac 51
          |||| |||||||||||||||||||||
Sbjct: 7  gatgaagccaaggatgacttgccgac 32




>42760_zma-MIR169r:mirbase
          Length = 126

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 gcagccaaggatgacttgccg 49
          |||||||||||||||||||||
Sbjct: 1  gcagccaaggatgacttgccg 21




>42529_sbi-MIR169a:mirbase
          Length = 91

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 cagccaaggatgacttgccga 50
          |||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccga 21




>41373_ptc-MIR169s:mirbase
          Length = 120

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 25 tgatgcagccaaggatgacttgccg 49
          |||| ||||||||||||||||||||
Sbjct: 7  tgattcagccaaggatgacttgccg 31




>41359_ptc-MIR169e:mirbase
          Length = 166

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 gcagccaaggatgacttgccg 49
          |||||||||||||||||||||
Sbjct: 10 gcagccaaggatgacttgccg 30




>42539_sbi-MIR169k:mirbase
          Length = 97

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 30 cagccaaggatgacttgccg 49
          ||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccg 20




>42530_sbi-MIR169b:mirbase
          Length = 102

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 30 cagccaaggatgacttgccg 49
          ||||||||||||||||||||
Sbjct: 1  cagccaaggatgacttgccg 20




>41380_ptc-MIR169z:mirbase
          Length = 118

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 112 ggcaggttgttcttggctacattt 135
           |||| |||||||||||||||||||
Sbjct: 92  ggcaagttgttcttggctacattt 115




>41362_ptc-MIR169h:mirbase
          Length = 118

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 30 cagccaaggatgacttgccg 49
          ||||||||||||||||||||
Sbjct: 11 cagccaaggatgacttgccg 30




>40689_mtr-MIR169l:mirbase
          Length = 240

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 26 gatgcagccaaggatgacttgccg 49
          |||| |||||||||||||||||||
Sbjct: 2  gatgaagccaaggatgacttgccg 25




>40681_mtr-MIR169d:mirbase
          Length = 240

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 26 gatgcagccaaggatgacttgccg 49
          |||| |||||||||||||||||||
Sbjct: 2  gatgaagccaaggatgacttgccg 25




>40357_rco-MIR169b:mirbase
          Length = 93

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 30 cagccaaggatgacttgccg 49
          ||||||||||||||||||||
Sbjct: 6  cagccaaggatgacttgccg 25




>40356_rco-MIR169a:mirbase
          Length = 92

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 30 cagccaaggatgacttgccg 49
          ||||||||||||||||||||
Sbjct: 6  cagccaaggatgacttgccg 25




>40049_ath-MIR169e:mirbase
          Length = 217

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 31 agccaaggatgacttgccga 50
          ||||||||||||||||||||
Sbjct: 71 agccaaggatgacttgccga 90




>40048_ath-MIR169d:mirbase
          Length = 154

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 31 agccaaggatgacttgccga 50
          ||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccga 62




>40047_ath-MIR169c:mirbase
          Length = 411

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  cagccaaggatgacttgccg 49
           ||||||||||||||||||||
Sbjct: 113 cagccaaggatgacttgccg 132




>39838_aly-MIR169e:mirbase
          Length = 174

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 31 agccaaggatgacttgccga 50
          ||||||||||||||||||||
Sbjct: 53 agccaaggatgacttgccga 72




>39837_aly-MIR169d:mirbase
          Length = 155

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 31 agccaaggatgacttgccga 50
          ||||||||||||||||||||
Sbjct: 43 agccaaggatgacttgccga 62




>39836_aly-MIR169c:mirbase
          Length = 292

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 30 cagccaaggatgacttgccg 49
          ||||||||||||||||||||
Sbjct: 45 cagccaaggatgacttgccg 64