miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41300_ptc-MIR159b:mirbase
          Length = 187

 Score =  297 bits (150), Expect = 2e-81
 Identities = 176/187 (94%)
 Strand = Plus / Plus

                                                                       
Query: 12  gattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 71
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 60

                                                                       
Query: 72  tgagctatgaatcccacagccctatcaccatctgttattttgacgggcctgcggcttgca 131
           |||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 61  tgagctatgaatcccacagccctatcaccatcagtcattttgatgggcctgcggcttgca 120

                                                                       
Query: 132 tatctcaggagctttattacctaatgttggatcnnnnnnnggattgaagggagctctaaa 191
           |||||||||||||||||||||||||||| ||||       ||||||||||||||||||||
Sbjct: 121 tatctcaggagctttattacctaatgttagatctttttttggattgaagggagctctaaa 180

                  
Query: 192 cctttga 198
           |||||||
Sbjct: 181 cctttga 187




>40338_rco-MIR159:mirbase
          Length = 180

 Score =  107 bits (54), Expect = 3e-24
 Identities = 72/78 (92%)
 Strand = Plus / Plus

                                                                      
Query: 19 gagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagcta 78
          ||||||||||||||||||||||||||| | || || ||||||||| ||||||||||||||
Sbjct: 1  gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60

                            
Query: 79 tgaatcccacagccctat 96
          || |||||||||||||||
Sbjct: 61 tggatcccacagccctat 78




>41572_vvi-MIR159c:mirbase
          Length = 190

 Score = 97.6 bits (49), Expect = 3e-21
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                      
Query: 17 tggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagc 76
          ||||||||||||||||||||||||||||| | || | |||||||||| ||||||||||  
Sbjct: 4  tggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgact 63

                               
Query: 77 tatgaatcccacagccctatc 97
          |||| ||||||||||||||||
Sbjct: 64 tatggatcccacagccctatc 84




>41299_ptc-MIR159a:mirbase
          Length = 183

 Score = 97.6 bits (49), Expect = 3e-21
 Identities = 150/183 (81%), Gaps = 6/183 (3%)
 Strand = Plus / Plus

                                                                       
Query: 12  gattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 71
           ||||| |||||||||||||||||||||||||||| | || ||||||||||||  ||||||
Sbjct: 1   gattagggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgc 60

                                                                       
Query: 72  tgagctatgaatcccacagccctatc-accatctgttattttgacgggcctgcggcttgc 130
           | ||||||| |||| |||| |||||| | || |||       ||  ||  ||||||||||
Sbjct: 61  taagctatggatcc-acagtcctatctatcaactgaag----gataggtttgcggcttgc 115

                                                                       
Query: 131 atatctcaggagctttattacctaatgttggatcnnnnnnnggattgaagggagctctaa 190
           ||||||||||||||||||| ||||||||| ||||       |||||||||||||||||||
Sbjct: 116 atatctcaggagctttattgcctaatgttagatccctttttggattgaagggagctctaa 175

              
Query: 191 acc 193
           |||
Sbjct: 176 acc 178




>41301_ptc-MIR159c:mirbase
          Length = 183

 Score = 89.7 bits (45), Expect = 8e-19
 Identities = 149/183 (81%), Gaps = 6/183 (3%)
 Strand = Plus / Plus

                                                                       
Query: 12  gattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 71
           ||||| |||||||||||||||||||||||||||| | || ||||||||||||  ||||||
Sbjct: 1   gattagggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgc 60

                                                                       
Query: 72  tgagctatgaatcccacagccctatc-accatctgttattttgacgggcctgcggcttgc 130
           | ||||||| |||| |||| |||||| | || | |       ||  ||  ||||||||||
Sbjct: 61  taagctatggatcc-acagtcctatctatcaaccgaag----gataggtttgcggcttgc 115

                                                                       
Query: 131 atatctcaggagctttattacctaatgttggatcnnnnnnnggattgaagggagctctaa 190
           ||||||||||||||||||| ||||||||| ||||       |||||||||||||||||||
Sbjct: 116 atatctcaggagctttattgcctaatgttagatccctttttggattgaagggagctctaa 175

              
Query: 191 acc 193
           |||
Sbjct: 176 acc 178




>40397_ahy-MIR159:mirbase
          Length = 197

 Score = 77.8 bits (39), Expect = 3e-15
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                      
Query: 20 agtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctat 79
          |||||||||||||||||||||| ||| | || || ||||||||| |||||||| ||||||
Sbjct: 1  agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60

                     
Query: 80 gaatcccacag 90
          | |||||||||
Sbjct: 61 ggatcccacag 71




>40432_gma-MIR159a:mirbase
          Length = 214

 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                      
Query: 11 ggattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctg 70
          |||||||| ||||||||||||||||||||||| || | || | ||||||  || ||||||
Sbjct: 10 ggattatgaagtggagctccttgaagtccaattgaggatcttactgggtgaattgagctg 69

                              
Query: 71 ctgagctatgaatcccacag 90
          || ||||||| |||||||||
Sbjct: 70 cttagctatggatcccacag 89




>41024_pvu-MIR159a:mirbase
          Length = 174

 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                      
Query: 21 gtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatg 80
          |||||||||||||||||||||| || | || | |||||| ||| |||||||| |||||||
Sbjct: 1  gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60

                    
Query: 81 aatcccacag 90
           |||||||||
Sbjct: 61 gatcccacag 70




>41023_pvu-MIR159a:mirbase
          Length = 174

 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                      
Query: 21 gtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatg 80
          |||||||||||||||||||||| || | || | |||||| ||| |||||||| |||||||
Sbjct: 1  gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60

                    
Query: 81 aatcccacag 90
           |||||||||
Sbjct: 61 gatcccacag 70




>41218_csi-MIR159:mirbase
          Length = 216

 Score = 63.9 bits (32), Expect = 5e-11
 Identities = 69/80 (86%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                      
Query: 18 ggagtggagctccttgaagtccaatagaagctcctgct-gggtagatcgagctgctgagc 76
          |||||||||||||||||||||||| ||| | ||  ||  ||||| || ||||||||||||
Sbjct: 8  ggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagc 67

                              
Query: 77 tatgaatcccacagccctat 96
          |||| ||||||||| |||||
Sbjct: 68 tatggatcccacagtcctat 87




>39804_aly-MIR159a:mirbase
          Length = 222

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 124 ggcttgcatatctcaggagcttta 147
           ||||||||||||||||||||||||
Sbjct: 131 ggcttgcatatctcaggagcttta 154




>40016_ath-MIR159a:mirbase
          Length = 184

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 127 ttgcatatctcaggagcttta 147
           |||||||||||||||||||||
Sbjct: 114 ttgcatatctcaggagcttta 134




>41528_sly-MIR159:mirbase
          Length = 177

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 22 tggagctccttgaagtccaa 41
          ||||||||||||||||||||
Sbjct: 1  tggagctccttgaagtccaa 20




>40311_bra-MIR159a:mirbase
          Length = 185

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 124 ggcttgcatatctcaggagcttta 147
           ||||| ||||||||||||||||||
Sbjct: 111 ggcttacatatctcaggagcttta 134




>40261_bna-MIR159:mirbase
          Length = 183

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 124 ggcttgcatatctcaggagcttta 147
           ||||| ||||||||||||||||||
Sbjct: 109 ggcttacatatctcaggagcttta 132