miRNEST 2.0, an integrative microRNA resource :: BLAST
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 139 bits (70), Expect = 8e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 6 ggtctctgattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagctggc 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 60
Query: 66 tggacatgactggttgtt 83
| ||||||||||||||||
Sbjct: 61 tcgacatgactggttgtt 78
Score = 79.8 bits (40), Expect = 6e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 124 tagcgaattggatcccgccttgcatcaactgaatcggagg 163
||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagcgaattggatcccgccttgcatcaactgaatcggagg 160
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 105 bits (53), Expect = 1e-23
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 6 ggtctctgattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagctggc 65
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaactgattcggcgatttgattgccagatggc 60
Query: 66 t 66
|
Sbjct: 61 t 61
Score = 69.9 bits (35), Expect = 6e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 128 gaattggatcccgccttgcatcaactgaatcggag 162
|||||||||||||||||||||||||||||||||||
Sbjct: 101 gaattggatcccgccttgcatcaactgaatcggag 135
>40448_gma-MIR168:mirbase
Length = 125
Score = 85.7 bits (43), Expect = 1e-17
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 127 cgaattggatcccgccttgcatcaactgaatcggaggccgcgg 169
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 cgaattggatcccgccttgcatcaactgaatcggaggccgcgg 120
Score = 60.0 bits (30), Expect = 6e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 4 gcggtctctgattcgcttggtgcaggtcgggaac 37
||||||||| ||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
>41101_tcc-MIR168:mirbase
Length = 167
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 127 cgaattggatcccgccttgcatcaactgaatcggaggccgcgg 169
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 117 cgaattggatcccgccttgcatcaactgaatcggagaccgcgg 159
Score = 75.8 bits (38), Expect = 9e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1 ccggcggtctctgattcgcttggtgcaggtcgggaactgatt 42
|||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6 ccggcggtctctaattcgcttggtgcaggtcgggaactgatt 47
>41215_crt-MIR168:mirbase
Length = 201
Score = 75.8 bits (38), Expect = 9e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1 ccggcggtctctgattcgcttggtgcaggtcgggaactgatt 42
|||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6 ccggcggtctctaattcgcttggtgcaggtcgggaactgatt 47
Score = 73.8 bits (37), Expect = 4e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 126 gcgaattggatcccgccttgcatcaactgaatcggag 162
|||||||||||||||||||||||||||||||||||||
Sbjct: 132 gcgaattggatcccgccttgcatcaactgaatcggag 168
>41210_ccl-MIR168:mirbase
Length = 176
Score = 75.8 bits (38), Expect = 9e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1 ccggcggtctctgattcgcttggtgcaggtcgggaactgatt 42
|||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5 ccggcggtctctaattcgcttggtgcaggtcgggaactgatt 46
Score = 73.8 bits (37), Expect = 4e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 126 gcgaattggatcccgccttgcatcaactgaatcggag 162
|||||||||||||||||||||||||||||||||||||
Sbjct: 131 gcgaattggatcccgccttgcatcaactgaatcggag 167
>40044_ath-MIR168b:mirbase
Length = 124
Score = 75.8 bits (38), Expect = 9e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1 ccggcggtctctgattcgcttggtgcaggtcgggaactgatt 42
||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4 ccggcggtctcggattcgcttggtgcaggtcgggaactgatt 45
>39833_aly-MIR168b:mirbase
Length = 176
Score = 75.8 bits (38), Expect = 9e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 1 ccggcggtctctgattcgcttggtgcaggtcgggaactgatt 42
||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 28 ccggcggtctcggattcgcttggtgcaggtcgggaactgatt 69
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 134 gatcccgccttgcatcaactgaatcggag 162
||||||| |||| ||||||||||||||||
Sbjct: 110 gatcccgtcttgtatcaactgaatcggag 138
>40271_bna-MIR168:mirbase
Length = 133
Score = 65.9 bits (33), Expect = 9e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 2 cggcggtctctgattcgcttggtgcaggtcgggaactgatt 42
|||||| |||||| |||||||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactgatt 44
>40355_rco-MIR168:mirbase
Length = 131
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 128 gaattggatcccgccttgcatcaactgaatcg 159
||||||||||||||||||||||||||||||||
Sbjct: 97 gaattggatcccgccttgcatcaactgaatcg 128
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 14 attcgcttggtgcaggtcgggaactgatt 42
|||||||||||||||||||||||||||||
Sbjct: 4 attcgcttggtgcaggtcgggaactgatt 32
>40043_ath-MIR168a:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 130 attggatcccgccttgcatcaactgaatcgga 161
||||||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatcgga 127
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 13 gattcgcttggtgcaggtcgggaactgattcggc 46
||||||||||||||||||||||||| |||||||
Sbjct: 15 gattcgcttggtgcaggtcgggaaccaattcggc 48
>39832_aly-MIR168a:mirbase
Length = 155
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 130 attggatcccgccttgcatcaactgaatcgga 161
||||||||||||||||||||||||||||||||
Sbjct: 102 attggatcccgccttgcatcaactgaatcgga 133
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 13 gattcgcttggtgcaggtcgggaactgattcggc 46
||||||||||||||||||||||||| |||||||
Sbjct: 21 gattcgcttggtgcaggtcgggaaccaattcggc 54
>41596_vvi-MIR168:mirbase
Length = 132
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 134 gatcccgccttgcatcaactgaatcggag 162
|||||||||||||||||||||||||||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggag 127
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 6 ggtctctgattcgcttggtgcaggtcgggaac 37
||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
>42742_zma-MIR168b:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||||||| ||||||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcggag 92
>42741_zma-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||| ||| ||||||||||
Sbjct: 60 ggatcccgccttgcaccaagtgaatcggag 89
>42460_sof-MIR168b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||| ||| ||||||||||
Sbjct: 62 ggatcccgccttgcaccaagtgaatcggag 91
>42459_sof-MIR168a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||| ||| ||||||||||
Sbjct: 63 ggatcccgccttgcaccaagtgaatcggag 92
>41962_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41961_osa-MIR168a:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||| ||| ||||||||||
Sbjct: 55 ggatcccgccttgcaccaagtgaatcggag 84
>41888_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41887_hvu-MIR168:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||| ||| ||||||||||
Sbjct: 66 ggatcccgccttgcaccaagtgaatcggag 95
>41753_bdi-MIR168:mirbase
Length = 136
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 ggatcccgccttgcatcaactgaatcggag 162
||||||||||||||| ||| ||||||||||
Sbjct: 75 ggatcccgccttgcaccaagtgaatcggag 104
