miRNEST 2.0, an integrative microRNA resource :: BLAST
>40296_bna-MIR396a:mirbase
Length = 117
Score = 173 bits (86), Expect = 3e-44
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 42 tagagtgttaaatgttagagatttttagttatttaatttcgctstaaaataagggaaatg 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tagagtgttaaatgttagagatttttagttatttaatttcgctstaaaataagggaaatg 29
Query: 102 aaaaagaaagttcaagaaagctgtggaa 129
||||||||||||||||||||||||||||
Sbjct: 28 aaaaagaaagttcaagaaagctgtggaa 1
>39878_aly-MIR396b:mirbase
Length = 188
Score = 85.0 bits (42), Expect = 1e-17
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 95 ggaaatgaaaaagaaagttcaagaaagctgtggaaaaatataacca 140
||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 66 ggaaatgaaaaagaaagttcaagaaagctgtggaaaaatatgacca 21
Score = 58.9 bits (29), Expect = 1e-09
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1 attgtcatgttttcccacagctttsttgagc 31
|||||||||||||||||||||||| ||||||
Sbjct: 165 attgtcatgttttcccacagctttcttgagc 135
>40086_ath-MIR396b:mirbase
Length = 135
Score = 75.0 bits (37), Expect = 1e-14
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 95 ggaaatgaaaaagaaagttcaagaaagctgtggaaaa 131
|||||||||||||||||||||||||||||||||||||
Sbjct: 45 ggaaatgaaaaagaaagttcaagaaagctgtggaaaa 9
Score = 54.8 bits (27), Expect = 2e-08
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 3 tgtcatgttttcccacagctttsttgagc 31
|||||||||||||||||||||| ||||||
Sbjct: 135 tgtcatgttttcccacagctttcttgagc 107
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 56.8 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 104 aaagaaagttcaagaaagctgtggaaaa 131
||||||||||||||||||||||||||||
Sbjct: 46 aaagaaagttcaagaaagctgtggaaaa 19
Score = 50.8 bits (25), Expect = 3e-07
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1 attgtcatgttttcccacagctttsttgagc 31
|||| ||||||||||||||||||| ||||||
Sbjct: 142 attgccatgttttcccacagctttcttgagc 112
>41242_csi-MIR396b:mirbase
Length = 134
Score = 50.8 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaaaaata 134
|||||||||||||||||||||||||
Sbjct: 39 agttcaagaaagctgtggaaaaata 15
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 48.8 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaaaa 132
||||||||||||||||||||||||
Sbjct: 31 aagttcaagaaagctgtggaaaaa 8
>41243_csi-MIR396c:mirbase
Length = 178
Score = 48.8 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaaaa 132
||||||||||||||||||||||||
Sbjct: 33 aagttcaagaaagctgtggaaaaa 10
Score = 42.8 bits (21), Expect = 7e-05
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 3 tgtcatgttttcccacagctttsttga 29
||||||||||| |||||||||| ||||
Sbjct: 3 tgtcatgtttttccacagctttcttga 29
>39426_pta-MIR396:mirbase
Length = 119
Score = 48.8 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 108 aaagttcaagaaagctgtggaaaa 131
||||||||||||||||||||||||
Sbjct: 38 aaagttcaagaaagctgtggaaaa 15
>39379_pab-MIR396a:mirbase
Length = 100
Score = 48.8 bits (24), Expect = 1e-06
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 catgttttcccacagctttsttgagc 31
||||||||||||||||||| ||||||
Sbjct: 90 catgttttcccacagctttcttgagc 65
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 35 agttcaagaaagctgtggaa 16
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 46.8 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaaa 131
|||||||||||||||||||||||
Sbjct: 34 aagttcaagaaagctgtggaaaa 12
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 46.8 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaaa 131
|||||||||||||||||||||||
Sbjct: 31 aagttcaagaaagctgtggaaaa 9
Score = 40.7 bits (20), Expect = 3e-04
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 6 catgttttcccacagctttsttgagc 31
|||||| |||||||||||| ||||||
Sbjct: 144 catgttctcccacagctttcttgagc 119
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 46.8 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaaa 131
|||||||||||||||||||||||
Sbjct: 31 aagttcaagaaagctgtggaaaa 9
>41212_ccl-MIR396:mirbase
Length = 277
Score = 46.8 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaaa 131
|||||||||||||||||||||||
Sbjct: 163 aagttcaagaaagctgtggaaaa 141
Score = 40.7 bits (20), Expect = 3e-04
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 6 catgttttcccacagctttsttgagc 31
|||||| |||||||||||| ||||||
Sbjct: 259 catgttctcccacagctttcttgagc 234
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 46.8 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaaa 131
|||||||||||||||||||||||
Sbjct: 26 aagttcaagaaagctgtggaaaa 4
>40476_gma-MIR396d:mirbase
Length = 108
Score = 46.8 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaaa 131
|||||||||||||||||||||||
Sbjct: 31 aagttcaagaaagctgtggaaaa 9
>40475_gma-MIR396c:mirbase
Length = 117
Score = 46.8 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaaa 131
|||||||||||||||||||||||
Sbjct: 41 aagttcaagaaagctgtggaaaa 19
>40474_gma-MIR396b:mirbase
Length = 126
Score = 46.8 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaaa 131
|||||||||||||||||||||||
Sbjct: 41 aagttcaagaaagctgtggaaaa 19
>40379_rco-MIR396:mirbase
Length = 124
Score = 46.8 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaaa 131
|||||||||||||||||||||||
Sbjct: 26 aagttcaagaaagctgtggaaaa 4
>39381_pab-MIR396c:mirbase
Length = 143
Score = 46.8 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaaaatat 135
|||||||||||||| ||||||||||||
Sbjct: 45 aagttcaagaaagccgtggaaaaatat 19
>42812_zma-MIR396f:mirbase
Length = 117
Score = 44.8 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaa 130
||||||||||||||||||||||
Sbjct: 22 aagttcaagaaagctgtggaaa 1
>42811_zma-MIR396e:mirbase
Length = 166
Score = 44.8 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaa 130
||||||||||||||||||||||
Sbjct: 22 aagttcaagaaagctgtggaaa 1
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 44.8 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaa 130
||||||||||||||||||||||
Sbjct: 41 aagttcaagaaagctgtggaaa 20
>42028_osa-MIR396c:mirbase
Length = 141
Score = 44.8 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaa 130
||||||||||||||||||||||
Sbjct: 31 aagttcaagaaagctgtggaaa 10
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 44.8 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaaa 130
||||||||||||||||||||||
Sbjct: 52 aagttcaagaaagctgtggaaa 31
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 44.8 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaaaa 131
||||||||||||||||||||||
Sbjct: 33 agttcaagaaagctgtggaaaa 12
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 44.8 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 108 aaagttcaagaaagctgtggaa 129
||||||||||||||||||||||
Sbjct: 22 aaagttcaagaaagctgtggaa 1
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 44.8 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaaaa 131
||||||||||||||||||||||
Sbjct: 40 agttcaagaaagctgtggaaaa 19
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 42.8 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaaaaata 134
|||||||||||||||||||| ||||
Sbjct: 30 agttcaagaaagctgtggaagaata 6
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 42.8 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaaaaata 134
|||||||||||||||||||| ||||
Sbjct: 30 agttcaagaaagctgtggaagaata 6
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 42.8 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaaaaata 134
|||||||||||||||||||| ||||
Sbjct: 30 agttcaagaaagctgtggaagaata 6
>41241_csi-MIR396a:mirbase
Length = 153
Score = 42.8 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 105 aagaaagttcaagaaagctgtggaa 129
|||| ||||||||||||||||||||
Sbjct: 45 aagacagttcaagaaagctgtggaa 21
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 112 ttcaagaaagctgtggaaaa 131
||||||||||||||||||||
Sbjct: 90 ttcaagaaagctgtggaaaa 109
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 42.8 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 109 aagttcaagaaagctgtggaa 129
|||||||||||||||||||||
Sbjct: 41 aagttcaagaaagctgtggaa 21
>41141_tcc-MIR396d:mirbase
Length = 182
Score = 42.8 bits (21), Expect = 7e-05
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 5 tcatgttttcccacagctttsttgagc 31
|||||||||||||| ||||| ||||||
Sbjct: 168 tcatgttttcccacggctttcttgagc 142
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 42.8 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaaaaata 134
|||||||||||||||||||| ||||
Sbjct: 40 agttcaagaaagctgtggaagaata 16
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 42.8 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaaaaata 134
|||||||||||||||||||| ||||
Sbjct: 30 agttcaagaaagctgtggaagaata 6
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 42.8 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaaaaata 134
|||||||||||||||||||| ||||
Sbjct: 30 agttcaagaaagctgtggaagaata 6
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 42.8 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaaaaata 134
|||||||||||||||||||| ||||
Sbjct: 25 agttcaagaaagctgtggaagaata 1
>40646_lja-MIR396:mirbase
Length = 108
Score = 42.8 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaaaaata 134
|||||||||||||||||||| ||||
Sbjct: 35 agttcaagaaagctgtggaagaata 11
>40473_gma-MIR396a:mirbase
Length = 140
Score = 42.8 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaaaaata 134
|||||||||||||||||||| ||||
Sbjct: 40 agttcaagaaagctgtggaagaata 16
>40085_ath-MIR396a:mirbase
Length = 151
Score = 42.8 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaaaaata 134
|||||||||||||||||||| ||||
Sbjct: 30 agttcaagaaagctgtggaagaata 6
>39877_aly-MIR396a:mirbase
Length = 172
Score = 42.8 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaaaaata 134
|||||||||||||||||||| ||||
Sbjct: 43 agttcaagaaagctgtggaagaata 19
>42814_zma-MIR396h:mirbase
Length = 124
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 79 agttcaagaaagctgtggaa 98
>42813_zma-MIR396g:mirbase
Length = 114
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 92 agttcaagaaagctgtggaa 111
>42808_zma-MIR396b:mirbase
Length = 136
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 40 agttcaagaaagctgtggaa 21
>42807_zma-MIR396a:mirbase
Length = 137
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 40 agttcaagaaagctgtggaa 21
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 40 agttcaagaaagctgtggaa 21
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 40 agttcaagaaagctgtggaa 21
>42472_ssp-MIR396:mirbase
Length = 95
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 20 agttcaagaaagctgtggaa 1
>42461_sof-MIR396:mirbase
Length = 134
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 40 agttcaagaaagctgtggaa 21
>42027_osa-MIR396b:mirbase
Length = 116
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 30 agttcaagaaagctgtggaa 11
>42026_osa-MIR396a:mirbase
Length = 154
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 30 agttcaagaaagctgtggaa 11
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 52 agttcaagaaagctgtggaa 33
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 52 agttcaagaaagctgtggaa 33
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 30 agttcaagaaagctgtggaa 11
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 20 agttcaagaaagctgtggaa 1
>40477_gma-MIR396e:mirbase
Length = 114
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 110 agttcaagaaagctgtggaa 129
||||||||||||||||||||
Sbjct: 26 agttcaagaaagctgtggaa 7
