miRNEST 2.0, an integrative microRNA resource :: BLAST
>40108_ath-MIR408:mirbase
Length = 218
Score = 133 bits (67), Expect = 3e-32
Identities = 100/110 (90%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 12 agggagccagggaagaggcagtgcatgggaagagaccaaacatagtcatttgatgttttg 71
||||||||||||||||||||||||||||| |||||| ||||| |||| ||| |||||||
Sbjct: 145 agggagccagggaagaggcagtgcatgggtagagacaaaacagagtcgtttaatgtttta 86
Query: 72 gtaaaaactcgatccatgctctgcttgttccctgtctctctctcgttacc 121
|| |||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 85 gt--aaactcaatccatgctctgcttgttccctgtctctctctcattacc 38
>39897_aly-MIR408:mirbase
Length = 211
Score = 127 bits (64), Expect = 2e-30
Identities = 94/103 (91%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 12 agggagccagggaagaggcagtgcatgggaagagaccaaacatagtcatttgatgttttg 71
||||||||||||||||||||||||||||| |||||| ||||| |||| ||| |||||||
Sbjct: 142 agggagccagggaagaggcagtgcatgggtagagacaaaacagagtcgtttaatgtttta 83
Query: 72 gtaaaaactcgatccatgctctgcttgttccctgtctctctct 114
|| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 82 gt--aaactcaatccatgctctgcttgttccctgtctctctct 42
>41683_vvi-MIR408:mirbase
Length = 107
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 15 gagccagggaagaggcagtgcatgggaagag 45
|||||||||||||||||||||||||| ||||
Sbjct: 99 gagccagggaagaggcagtgcatgggtagag 69
>41252_csi-MIR408:mirbase
Length = 153
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 15 gagccagggaagaggcagtgcatggga 41
|||||||||||||||||||||||||||
Sbjct: 142 gagccagggaagaggcagtgcatggga 116
>41463_ptc-MIR408:mirbase
Length = 105
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 16 agccagggaagaggcagtgcatgggaagag 45
||||||||||||||||||||||||| ||||
Sbjct: 97 agccagggaagaggcagtgcatgggtagag 68
>41193_aqc-MIR408:mirbase
Length = 87
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 16 agccagggaagaggcagtgcatgggaagag 45
|||||||||||||||||||||||| |||||
Sbjct: 1 agccagggaagaggcagtgcatggaaagag 30
>42464_sof-MIR408c:mirbase
Length = 286
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 13 gggagccagggaagaggcagtgcatggga 41
|||||||||||||||||||||||| ||||
Sbjct: 271 gggagccagggaagaggcagtgcagggga 243
>42463_sof-MIR408b:mirbase
Length = 286
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 13 gggagccagggaagaggcagtgcatggga 41
|||||||||||||||||||||||| ||||
Sbjct: 271 gggagccagggaagaggcagtgcagggga 243
>42462_sof-MIR408a:mirbase
Length = 283
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 13 gggagccagggaagaggcagtgcatggga 41
|||||||||||||||||||||||| ||||
Sbjct: 268 gggagccagggaagaggcagtgcagggga 240
>42052_osa-MIR408:mirbase
Length = 213
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 13 gggagccagggaagaggcagtgcatggga 41
|||||||||||||||||||||||| ||||
Sbjct: 177 gggagccagggaagaggcagtgcagggga 149
>40405_ahy-MIR408:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 6 agaaacagggagccagggaagaggcagtgcatg 38
||||| || ||||||||||||||||||||||||
Sbjct: 112 agaaagagagagccagggaagaggcagtgcatg 80
>40404_ahy-MIR408:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 6 agaaacagggagccagggaagaggcagtgcatg 38
||||| || ||||||||||||||||||||||||
Sbjct: 112 agaaagagagagccagggaagaggcagtgcatg 80
>42829_zma-MIR408:mirbase
Length = 191
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 14 ggagccagggaagaggcagtgcatggga 41
||||||||||||||||||||||| ||||
Sbjct: 175 ggagccagggaagaggcagtgcagggga 148
>42647_tae-MIR408:mirbase
Length = 187
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 13 gggagccagggaagaggcagtgca 36
||||||||||||||||||||||||
Sbjct: 160 gggagccagggaagaggcagtgca 137
>42465_sof-MIR408d:mirbase
Length = 215
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 13 gggagccagggaagaggcagtgca 36
||||||||||||||||||||||||
Sbjct: 200 gggagccagggaagaggcagtgca 177
>42830_zma-MIR408b:mirbase
Length = 147
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 gagccagggaagaggcagtgcatggga 41
|||||||||||||||||||||| ||||
Sbjct: 147 gagccagggaagaggcagtgcagggga 121
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 15 gagccagggaagaggcagtgcatggga 41
|||||||||||||||||||||| ||||
Sbjct: 248 gagccagggaagaggcagtgcagggga 222
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 agccagggaagaggcagtgcatg 38
|||||||||||||||||||||||
Sbjct: 114 agccagggaagaggcagtgcatg 92
>39428_pta-MIR408:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 15 gagccagggaagaggcagtgcat 37
|||||||||||||||||||||||
Sbjct: 86 gagccagggaagaggcagtgcat 64
>42600_sbi-MIR408:mirbase
Length = 205
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 agccagggaagaggcagtgcatggga 41
||||||||||||||||||||| ||||
Sbjct: 205 agccagggaagaggcagtgcagggga 180
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 gagccagggaagaggcagtgca 36
||||||||||||||||||||||
Sbjct: 180 gagccagggaagaggcagtgca 159
>40391_rco-MIR408:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 16 agccagggaagaggcagtgcatgggaagag 45
||||||||||||||||||||| ||| ||||
Sbjct: 88 agccagggaagaggcagtgcaggggtagag 59
>39742_smo-MIR408:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 16 agccagggaagaggcagtgcat 37
||||||||||||||||||||||
Sbjct: 97 agccagggaagaggcagtgcat 76
>42466_sof-MIR408e:mirbase
Length = 283
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 13 gggagccagggaagaggcagtgca 36
|||||||||||||||| |||||||
Sbjct: 268 gggagccagggaagagtcagtgca 245
