miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40312_bra-MIR160a:mirbase
          Length = 127

 Score = 99.6 bits (50), Expect = 4e-22
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                       
Query: 12  atgtatatgcctggctccctgtatgccatacactaagttcatcgaccatcggcgacctcg 71
           |||| |||||||||||||||||||||||| | ||||| ||||||||||| |  |||||| 
Sbjct: 19  atgtgtatgcctggctccctgtatgccatcctctaagctcatcgaccattgatgacctcc 78

                                         
Query: 72  gtggatggcgtatgaggagccaagcatatt 101
           ||| |||||||||||||||||| |||||||
Sbjct: 79  gtgaatggcgtatgaggagccatgcatatt 108




>39807_aly-MIR160a:mirbase
          Length = 158

 Score = 99.6 bits (50), Expect = 4e-22
 Identities = 92/105 (87%), Gaps = 2/105 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtattatatatgtatatgcctggctccctgtatgccatacactaagttcatcgaccat 60
           |||||||||||||||||  ||||||||||||||||||||||  || || |||||||  ||
Sbjct: 26  atgtattatatatgtat--gcctggctccctgtatgccatatgctgagctcatcgagtat 83

                                                        
Query: 61  cggcgacctcggtggatggcgtatgaggagccaagcatattctca 105
           ||  |||||| |||||||||||||||||||||| |||||| ||||
Sbjct: 84  cgatgacctccgtggatggcgtatgaggagccatgcatatcctca 128




>40019_ath-MIR160a:mirbase
          Length = 85

 Score = 79.8 bits (40), Expect = 4e-16
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 17  tatgcctggctccctgtatgccatacactaagttcatcgaccatcggcgacctcggtgga 76
           |||||||||||||||||||||||||  || ||  ||||||  ||||  |||||| |||||
Sbjct: 2   tatgcctggctccctgtatgccatatgctgagcccatcgagtatcgatgacctccgtgga 61

                                   
Query: 77  tggcgtatgaggagccaagcatat 100
           ||||||||||||||||| ||||||
Sbjct: 62  tggcgtatgaggagccatgcatat 85




>40662_mtr-MIR160e:mirbase
          Length = 91

 Score = 61.9 bits (31), Expect = 9e-11
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 72  gtggatggcgtatgaggagccaagcatattc 102
           |||||||||||||||||||||||||||||||
Sbjct: 60  gtggatggcgtatgaggagccaagcatattc 90




>40659_mtr-MIR160b:mirbase
          Length = 91

 Score = 61.9 bits (31), Expect = 9e-11
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 72  gtggatggcgtatgaggagccaagcatattc 102
           |||||||||||||||||||||||||||||||
Sbjct: 60  gtggatggcgtatgaggagccaagcatattc 90




>40436_gma-MIR160:mirbase
          Length = 119

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                         
Query: 72  gtggatggcgtatgaggagccaagcatatt 101
           ||||||||||||||||||||||||||||||
Sbjct: 75  gtggatggcgtatgaggagccaagcatatt 104




>41307_ptc-MIR160c:mirbase
          Length = 98

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 67  cctcggtggatggcgtatgaggagccaagcatattc 102
           |||| |||||||||||||||||||||| ||||||||
Sbjct: 60  cctccgtggatggcgtatgaggagccatgcatattc 95



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 19 tgcctggctccctgtatgccat 40
          ||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32




>41306_ptc-MIR160b:mirbase
          Length = 98

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 67  cctcggtggatggcgtatgaggagccaagcatattc 102
           |||| |||||||||||||||||||||| ||||||||
Sbjct: 60  cctccgtggatggcgtatgaggagccatgcatattc 95



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 19 tgcctggctccctgtatgccat 40
          ||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32




>41219_csi-MIR160:mirbase
          Length = 143

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 67  cctcggtggatggcgtatgaggagccaagcatattc 102
           |||| |||||||||||||||||||||| ||||||||
Sbjct: 82  cctccgtggatggcgtatgaggagccatgcatattc 117




>41529_sly-MIR160a:mirbase
          Length = 129

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 14 gtatatgcctggctccctgtatgccat 40
          |||||||||||||||||||||||||||
Sbjct: 15 gtatatgcctggctccctgtatgccat 41



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 76  atggcgtatgaggagccaagcatattc 102
           |||||||||||||||||||||||||||
Sbjct: 81  atggcgtatgaggagccaagcatattc 107




>41577_vvi-MIR160e:mirbase
          Length = 102

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 15 tatatgcctggctccctgtatgccat 40
          ||||||||||||||||||||||||||
Sbjct: 7  tatatgcctggctccctgtatgccat 32



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 72  gtggatggcgtatgaggagccaagcatat 100
           |||||||||||||||||||||| ||||||
Sbjct: 65  gtggatggcgtatgaggagccatgcatat 93




>42705_zma-MIR160e:mirbase
          Length = 94

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 16 atatgcctggctccctgtatgcca 39
          ||||||||||||||||||||||||
Sbjct: 6  atatgcctggctccctgtatgcca 29




>42704_zma-MIR160d:mirbase
          Length = 142

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 16 atatgcctggctccctgtatgcca 39
          ||||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcca 41




>42636_tae-MIR160:mirbase
          Length = 148

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 16 atatgcctggctccctgtatgcca 39
          ||||||||||||||||||||||||
Sbjct: 19 atatgcctggctccctgtatgcca 42




>41926_osa-MIR160d:mirbase
          Length = 142

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 16 atatgcctggctccctgtatgcca 39
          ||||||||||||||||||||||||
Sbjct: 5  atatgcctggctccctgtatgcca 28




>41731_bdi-MIR160a:mirbase
          Length = 175

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 16 atatgcctggctccctgtatgcca 39
          ||||||||||||||||||||||||
Sbjct: 29 atatgcctggctccctgtatgcca 52




>41088_tcc-MIR160b:mirbase
          Length = 120

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 17 tatgcctggctccctgtatgccat 40
          ||||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgccat 42




>42706_zma-MIR160f:mirbase
          Length = 116

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 16 atatgcctggctccctgtatgcc 38
          |||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcc 40




>41927_osa-MIR160e:mirbase
          Length = 114

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 16 atatgcctggctccctgtatgcc 38
          |||||||||||||||||||||||
Sbjct: 8  atatgcctggctccctgtatgcc 30




>41576_vvi-MIR160d:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 18 atgcctggctccctgtatgccat 40
          |||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgccat 32




>41308_ptc-MIR160d:mirbase
          Length = 103

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 17 tatgcctggctccctgtatgcca 39
          |||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcca 31




>41305_ptc-MIR160a:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 17 tatgcctggctccctgtatgcca 39
          |||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcca 31




>40340_rco-MIR160b:mirbase
          Length = 96

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 17 tatgcctggctccctgtatgcca 39
          |||||||||||||||||||||||
Sbjct: 4  tatgcctggctccctgtatgcca 26




>40021_ath-MIR160c:mirbase
          Length = 89

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 17 tatgcctggctccctgtatgcca 39
          |||||||||||||||||||||||
Sbjct: 3  tatgcctggctccctgtatgcca 25




>39809_aly-MIR160c:mirbase
          Length = 119

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 17 tatgcctggctccctgtatgcca 39
          |||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgcca 44




>42707_zma-MIR160g:mirbase
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 18 atgcctggctccctgtatgcca 39
          ||||||||||||||||||||||
Sbjct: 1  atgcctggctccctgtatgcca 22




>41869_far-MIR160:mirbase
          Length = 148

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 18 atgcctggctccctgtatgcca 39
          ||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgcca 73




>41166_aqc-MIR160b:mirbase
          Length = 82

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 19 tgcctggctccctgtatgccat 40
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccat 22




>40661_mtr-MIR160d:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 19 tgcctggctccctgtatgccat 40
          ||||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgccat 27




>40658_mtr-MIR160:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 19 tgcctggctccctgtatgccat 40
          ||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccat 42




>40339_rco-MIR160a:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 19 tgcctggctccctgtatgccat 40
          ||||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgccat 27




>39731_smo-MIR160a:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 19 tgcctggctccctgtatgccat 40
          ||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32




>39375_pab-MIR160b:mirbase
          Length = 116

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 19 tgcctggctccctgtatgccat 40
          ||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccat 41




>42703_zma-MIR160c:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgcca 27




>42702_zma-MIR160b:mirbase
          Length = 121

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>42701_zma-MIR160a:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30




>42677_ttu-MIR160:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 9  tgcctggctccctgtatgcca 29




>42500_sbi-MIR160e:mirbase
          Length = 95

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42499_sbi-MIR160d:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42498_sbi-MIR160c:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42497_sbi-MIR160b:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42496_sbi-MIR160a:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>41925_osa-MIR160c:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgcca 27




>41924_osa-MIR160b:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>41923_osa-MIR160a:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 4  tgcctggctccctgtatgcca 24




>41734_bdi-MIR160d:mirbase
          Length = 150

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41733_bdi-MIR160c:mirbase
          Length = 148

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41732_bdi-MIR160b:mirbase
          Length = 146

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41575_vvi-MIR160c:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>40020_ath-MIR160b:mirbase
          Length = 89

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgcca 25




>39808_aly-MIR160b:mirbase
          Length = 125

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>39732_smo-MIR160b:mirbase
          Length = 108

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33




>39460_ppt-MIR160f:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>39459_ppt-MIR160e:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>39455_ppt-MIR160a:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>39374_pab-MIR160a:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 19 tgcctggctccctgtatgcca 39
          |||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgcca 34