miRNEST 2.0, an integrative microRNA resource :: BLAST
>40043_ath-MIR168a:mirbase
Length = 138
Score = 81.8 bits (41), Expect = 1e-16
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 70 ttattggtttgtaagcatggattggctcccgccttgcatcaactgaatcggagcctc 126
|||||||||||| |||| ||||||| |||||||||||||||||||||||||| ||||
Sbjct: 76 ttattggtttgtgagcagggattggatcccgccttgcatcaactgaatcggatcctc 132
>39832_aly-MIR168a:mirbase
Length = 155
Score = 79.8 bits (40), Expect = 4e-16
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 70 ttattggtttgtaagcatggattggctcccgccttgcatcaactgaatcgga 121
|||||||||||| |||| ||||||| ||||||||||||||||||||||||||
Sbjct: 82 ttattggtttgtgagcagggattggatcccgccttgcatcaactgaatcgga 133
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 90 attggctcccgccttgcatcaactgaatcggag 122
||||| |||||||||||||||||||||||||||
Sbjct: 103 attggatcccgccttgcatcaactgaatcggag 135
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 90 attggctcccgccttgcatcaactgaatcggag 122
||||| |||||||||||||||||||||||||||
Sbjct: 127 attggatcccgccttgcatcaactgaatcggag 159
>41215_crt-MIR168:mirbase
Length = 201
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 90 attggctcccgccttgcatcaactgaatcggag 122
||||| |||||||||||||||||||||||||||
Sbjct: 136 attggatcccgccttgcatcaactgaatcggag 168
Score = 42.1 bits (21), Expect = 1e-04
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 12 attcgcttggtgcagttcggg-actgattggct 43
||||||||||||||| ||||| |||||||||||
Sbjct: 19 attcgcttggtgcaggtcgggaactgattggct 51
>41210_ccl-MIR168:mirbase
Length = 176
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 90 attggctcccgccttgcatcaactgaatcggag 122
||||| |||||||||||||||||||||||||||
Sbjct: 135 attggatcccgccttgcatcaactgaatcggag 167
Score = 42.1 bits (21), Expect = 1e-04
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 12 attcgcttggtgcagttcggg-actgattggct 43
||||||||||||||| ||||| |||||||||||
Sbjct: 18 attcgcttggtgcaggtcgggaactgattggct 50
>41101_tcc-MIR168:mirbase
Length = 167
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 90 attggctcccgccttgcatcaactgaatcggag 122
||||| |||||||||||||||||||||||||||
Sbjct: 120 attggatcccgccttgcatcaactgaatcggag 152
Score = 44.1 bits (22), Expect = 2e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 12 attcgcttggtgcagttcggg-actgattggctg 44
||||||||||||||| ||||| ||||||||||||
Sbjct: 19 attcgcttggtgcaggtcgggaactgattggctg 52
>40448_gma-MIR168:mirbase
Length = 125
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 90 attggctcccgccttgcatcaactgaatcggag 122
||||| |||||||||||||||||||||||||||
Sbjct: 81 attggatcccgccttgcatcaactgaatcggag 113
>41596_vvi-MIR168:mirbase
Length = 132
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 96 tcccgccttgcatcaactgaatcggag 122
|||||||||||||||||||||||||||
Sbjct: 101 tcccgccttgcatcaactgaatcggag 127
>40044_ath-MIR168b:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 11 gattcgcttggtgcagttcggg-actgattggctgacac 48
|||||||||||||||| ||||| ||||||||||||||||
Sbjct: 16 gattcgcttggtgcaggtcgggaactgattggctgacac 54
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 94 gctcccgccttgcatcaactgaatcggag 122
||||||| |||| ||||||||||||||||
Sbjct: 86 gctcccgtcttgtatcaactgaatcggag 114
>40355_rco-MIR168:mirbase
Length = 131
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 90 attggctcccgccttgcatcaactgaatcg 119
||||| ||||||||||||||||||||||||
Sbjct: 99 attggatcccgccttgcatcaactgaatcg 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 12 attcgcttggtgcagttcggg-actgattggct 43
||||||||||||||| ||||| |||||||||||
Sbjct: 4 attcgcttggtgcaggtcgggaactgattggct 36
>42742_zma-MIR168b:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 96 tcccgccttgcatcaactgaatcggagcc 124
|||||||||||||||| ||||||||||||
Sbjct: 66 tcccgccttgcatcaagtgaatcggagcc 94
>40271_bna-MIR168:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 14 tcgcttggtgcagttcggg-actgattggctgacac 48
||||||||||||| ||||| ||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaactgattggctgacac 53
>39833_aly-MIR168b:mirbase
Length = 176
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 11 gattcgcttggtgcagttcggg-actgattggctgaca 47
|||||||||||||||| ||||| ||||||| |||||||
Sbjct: 40 gattcgcttggtgcaggtcgggaactgattagctgaca 77
>42741_zma-MIR168a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 96 tcccgccttgcatcaactgaatcggagcc 124
|||||||||||| ||| ||||||||||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagcc 94
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 96 tcccgccttgcatcaactgaatcggagcc 124
|||||||||||| ||| ||||||||||||
Sbjct: 63 tcccgccttgcaccaagtgaatcggagcc 91
>42460_sof-MIR168b:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 96 tcccgccttgcatcaactgaatcggagcc 124
|||||||||||| ||| ||||||||||||
Sbjct: 65 tcccgccttgcaccaagtgaatcggagcc 93
>42459_sof-MIR168a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 96 tcccgccttgcatcaactgaatcggagcc 124
|||||||||||| ||| ||||||||||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagcc 94
>41962_osa-MIR168a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 96 tcccgccttgcatcaactgaatcggagcc 124
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>41961_osa-MIR168a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 96 tcccgccttgcatcaactgaatcggagcc 124
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>41888_hvu-MIR168:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 96 tcccgccttgcatcaactgaatcggagcc 124
|||||||||||| ||| ||||||||||||
Sbjct: 69 tcccgccttgcaccaagtgaatcggagcc 97
>41887_hvu-MIR168:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 96 tcccgccttgcatcaactgaatcggagcc 124
|||||||||||| ||| ||||||||||||
Sbjct: 69 tcccgccttgcaccaagtgaatcggagcc 97
>41753_bdi-MIR168:mirbase
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 96 tcccgccttgcatcaactgaatcggagcc 124
|||||||||||| ||| ||||||||||||
Sbjct: 78 tcccgccttgcaccaagtgaatcggagcc 106
