miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40312_bra-MIR160a:mirbase
          Length = 127

 Score =  123 bits (62), Expect = 3e-29
 Identities = 92/102 (90%)
 Strand = Plus / Plus

                                                                       
Query: 27  tatgcctggctccctgtatgccatacactaagctcatcgaccatcgaggacttacgtgga 86
           |||||||||||||||||||||||| | ||||||||||||||||| || ||| | |||| |
Sbjct: 24  tatgcctggctccctgtatgccatcctctaagctcatcgaccattgatgacctccgtgaa 83

                                                     
Query: 87  tggcgtatgaggagccaagcatattttcatatgcatatacat 128
           ||||||||||||||||| |||||||||||||| ||| |||||
Sbjct: 84  tggcgtatgaggagccatgcatattttcatatacatttacat 125




>39807_aly-MIR160a:mirbase
          Length = 158

 Score = 95.6 bits (48), Expect = 8e-21
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                       
Query: 27  tatgcctggctccctgtatgccatacactaagctcatcgaccatcgaggacttacgtgga 86
           |||||||||||||||||||||||||  || ||||||||||  ||||| ||| | ||||||
Sbjct: 40  tatgcctggctccctgtatgccatatgctgagctcatcgagtatcgatgacctccgtgga 99

                                   
Query: 87  tggcgtatgaggagccaagcatat 110
           ||||||||||||||||| ||||||
Sbjct: 100 tggcgtatgaggagccatgcatat 123




>40019_ath-MIR160a:mirbase
          Length = 85

 Score = 87.7 bits (44), Expect = 2e-18
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                       
Query: 27  tatgcctggctccctgtatgccatacactaagctcatcgaccatcgaggacttacgtgga 86
           |||||||||||||||||||||||||  || ||| ||||||  ||||| ||| | ||||||
Sbjct: 2   tatgcctggctccctgtatgccatatgctgagcccatcgagtatcgatgacctccgtgga 61

                                   
Query: 87  tggcgtatgaggagccaagcatat 110
           ||||||||||||||||| ||||||
Sbjct: 62  tggcgtatgaggagccatgcatat 85




>40662_mtr-MIR160e:mirbase
          Length = 91

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 72/84 (85%), Gaps = 1/84 (1%)
 Strand = Plus / Plus

                                                                       
Query: 29  tgcctggctccctgtatgccatacactaagctcatcgacca-tcgaggacttacgtggat 87
           ||||||||||||||||||||||| |  |||||||| ||  | || | ||| |  ||||||
Sbjct: 6   tgcctggctccctgtatgccatatatgaagctcattgaaaaatcaatgacctttgtggat 65

                                   
Query: 88  ggcgtatgaggagccaagcatatt 111
           ||||||||||||||||||||||||
Sbjct: 66  ggcgtatgaggagccaagcatatt 89




>40659_mtr-MIR160b:mirbase
          Length = 91

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 72/84 (85%), Gaps = 1/84 (1%)
 Strand = Plus / Plus

                                                                       
Query: 29  tgcctggctccctgtatgccatacactaagctcatcgacca-tcgaggacttacgtggat 87
           ||||||||||||||||||||||| |  |||||||| ||  | || | ||| |  ||||||
Sbjct: 6   tgcctggctccctgtatgccatatatgaagctcattgaaaaatcaatgacctttgtggat 65

                                   
Query: 88  ggcgtatgaggagccaagcatatt 111
           ||||||||||||||||||||||||
Sbjct: 66  ggcgtatgaggagccaagcatatt 89




>40436_gma-MIR160:mirbase
          Length = 119

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 82  gtggatggcgtatgaggagccaagcatattt 112
           |||||||||||||||||||||||||||||||
Sbjct: 75  gtggatggcgtatgaggagccaagcatattt 105




>41577_vvi-MIR160e:mirbase
          Length = 102

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 75/89 (84%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 23  catatatgcctggctccctgtatgccatacactaagctcatcgac-catcgaggacttac 81
           ||||||||||||||||||||||||||||   |  ||| || || | |||||| | | | |
Sbjct: 5   catatatgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttc 64

                                        
Query: 82  gtggatggcgtatgaggagccaagcatat 110
           |||||||||||||||||||||| ||||||
Sbjct: 65  gtggatggcgtatgaggagccatgcatat 93




>41307_ptc-MIR160c:mirbase
          Length = 98

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 81  cgtggatggcgtatgaggagccaagcatatt 111
           ||||||||||||||||||||||| |||||||
Sbjct: 64  cgtggatggcgtatgaggagccatgcatatt 94



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 24 atatatgcctggctccctgtatgccat 50
          |||| ||||||||||||||||||||||
Sbjct: 6  atatgtgcctggctccctgtatgccat 32




>41306_ptc-MIR160b:mirbase
          Length = 98

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 81  cgtggatggcgtatgaggagccaagcatatt 111
           ||||||||||||||||||||||| |||||||
Sbjct: 64  cgtggatggcgtatgaggagccatgcatatt 94



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 24 atatatgcctggctccctgtatgccat 50
          |||| ||||||||||||||||||||||
Sbjct: 6  atatgtgcctggctccctgtatgccat 32




>41219_csi-MIR160:mirbase
          Length = 143

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 81  cgtggatggcgtatgaggagccaagcatatt 111
           ||||||||||||||||||||||| |||||||
Sbjct: 86  cgtggatggcgtatgaggagccatgcatatt 116



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 tgcctggctccctgtatgccat 50
          ||||||||||||||||||||||
Sbjct: 33 tgcctggctccctgtatgccat 54




>41529_sly-MIR160a:mirbase
          Length = 129

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 25 tatatgcctggctccctgtatgccat 50
          ||||||||||||||||||||||||||
Sbjct: 16 tatatgcctggctccctgtatgccat 41



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 86  atggcgtatgaggagccaagcatatt 111
           ||||||||||||||||||||||||||
Sbjct: 81  atggcgtatgaggagccaagcatatt 106




>42705_zma-MIR160e:mirbase
          Length = 94

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 26 atatgcctggctccctgtatgcca 49
          ||||||||||||||||||||||||
Sbjct: 6  atatgcctggctccctgtatgcca 29




>42704_zma-MIR160d:mirbase
          Length = 142

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 26 atatgcctggctccctgtatgcca 49
          ||||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcca 41




>42636_tae-MIR160:mirbase
          Length = 148

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 26 atatgcctggctccctgtatgcca 49
          ||||||||||||||||||||||||
Sbjct: 19 atatgcctggctccctgtatgcca 42




>41926_osa-MIR160d:mirbase
          Length = 142

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 26 atatgcctggctccctgtatgcca 49
          ||||||||||||||||||||||||
Sbjct: 5  atatgcctggctccctgtatgcca 28




>41731_bdi-MIR160a:mirbase
          Length = 175

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 26 atatgcctggctccctgtatgcca 49
          ||||||||||||||||||||||||
Sbjct: 29 atatgcctggctccctgtatgcca 52




>41088_tcc-MIR160b:mirbase
          Length = 120

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 27 tatgcctggctccctgtatgccat 50
          ||||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgccat 42




>42706_zma-MIR160f:mirbase
          Length = 116

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 26 atatgcctggctccctgtatgcc 48
          |||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcc 40




>41927_osa-MIR160e:mirbase
          Length = 114

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 26 atatgcctggctccctgtatgcc 48
          |||||||||||||||||||||||
Sbjct: 8  atatgcctggctccctgtatgcc 30




>41576_vvi-MIR160d:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 atgcctggctccctgtatgccat 50
          |||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgccat 32




>41308_ptc-MIR160d:mirbase
          Length = 103

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 27 tatgcctggctccctgtatgcca 49
          |||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcca 31




>41305_ptc-MIR160a:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 27 tatgcctggctccctgtatgcca 49
          |||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcca 31




>40340_rco-MIR160b:mirbase
          Length = 96

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 27 tatgcctggctccctgtatgcca 49
          |||||||||||||||||||||||
Sbjct: 4  tatgcctggctccctgtatgcca 26




>40021_ath-MIR160c:mirbase
          Length = 89

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 27 tatgcctggctccctgtatgcca 49
          |||||||||||||||||||||||
Sbjct: 3  tatgcctggctccctgtatgcca 25




>39809_aly-MIR160c:mirbase
          Length = 119

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 27 tatgcctggctccctgtatgcca 49
          |||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgcca 44




>42707_zma-MIR160g:mirbase
          Length = 86

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 28 atgcctggctccctgtatgcca 49
          ||||||||||||||||||||||
Sbjct: 1  atgcctggctccctgtatgcca 22




>41869_far-MIR160:mirbase
          Length = 148

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 28 atgcctggctccctgtatgcca 49
          ||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgcca 73




>41166_aqc-MIR160b:mirbase
          Length = 82

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 tgcctggctccctgtatgccat 50
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccat 22




>40661_mtr-MIR160d:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 tgcctggctccctgtatgccat 50
          ||||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgccat 27




>40658_mtr-MIR160:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 tgcctggctccctgtatgccat 50
          ||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccat 42




>40339_rco-MIR160a:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 tgcctggctccctgtatgccat 50
          ||||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgccat 27




>39731_smo-MIR160a:mirbase
          Length = 106

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 tgcctggctccctgtatgccat 50
          ||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32




>39375_pab-MIR160b:mirbase
          Length = 116

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 tgcctggctccctgtatgccat 50
          ||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccat 41




>42703_zma-MIR160c:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgcca 27




>42702_zma-MIR160b:mirbase
          Length = 121

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>42701_zma-MIR160a:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30




>42677_ttu-MIR160:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 9  tgcctggctccctgtatgcca 29




>42500_sbi-MIR160e:mirbase
          Length = 95

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42499_sbi-MIR160d:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42498_sbi-MIR160c:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42497_sbi-MIR160b:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42496_sbi-MIR160a:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>41925_osa-MIR160c:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgcca 27




>41924_osa-MIR160b:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>41923_osa-MIR160a:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 4  tgcctggctccctgtatgcca 24




>41734_bdi-MIR160d:mirbase
          Length = 150

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41733_bdi-MIR160c:mirbase
          Length = 148

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41732_bdi-MIR160b:mirbase
          Length = 146

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41575_vvi-MIR160c:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>40020_ath-MIR160b:mirbase
          Length = 89

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgcca 25




>39808_aly-MIR160b:mirbase
          Length = 125

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>39732_smo-MIR160b:mirbase
          Length = 108

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33




>39460_ppt-MIR160f:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>39459_ppt-MIR160e:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>39455_ppt-MIR160a:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>39374_pab-MIR160a:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 tgcctggctccctgtatgcca 49
          |||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgcca 34