miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42479_ssp-MIR444b:mirbase
          Length = 106

 Score =  202 bits (102), Expect = 4e-53
 Identities = 105/106 (99%)
 Strand = Plus / Plus

                                                                       
Query: 9   caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaagatca 68
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1   caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggatca 60

                                                         
Query: 69  tacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 114
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 106




>42478_ssp-MIR444a:mirbase
          Length = 105

 Score =  178 bits (90), Expect = 6e-46
 Identities = 103/106 (97%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                       
Query: 9   caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaagatca 68
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1   caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcagga-ca 59

                                                         
Query: 69  tacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 114
           ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 60  tacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttg 105




>42089_osa-MIR444d:mirbase
          Length = 143

 Score =  147 bits (74), Expect = 2e-36
 Identities = 111/121 (91%), Gaps = 3/121 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattg 60
           |||||||||||||||||||||  |||||||||||||||||||||| |||||||||| | |
Sbjct: 14  ggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattag 73

                                                                       
Query: 61  caagatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcct 120
            | |||  |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 74  -atgat--tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcct 130

            
Query: 121 c 121
           |
Sbjct: 131 c 131



 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 72  ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 119
           ||||| |||||||||||||  |||||||||||||||| ||||| ||||
Sbjct: 64  ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 4   ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
           |||| ||||| |||||||| |||||||  ||||||||||||| |||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82




>42088_osa-MIR444d:mirbase
          Length = 143

 Score =  147 bits (74), Expect = 2e-36
 Identities = 111/121 (91%), Gaps = 3/121 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattg 60
           |||||||||||||||||||||  |||||||||||||||||||||| |||||||||| | |
Sbjct: 14  ggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattag 73

                                                                       
Query: 61  caagatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcct 120
            | |||  |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 74  -atgat--tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcct 130

            
Query: 121 c 121
           |
Sbjct: 131 c 131



 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 72  ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 119
           ||||| |||||||||||||  |||||||||||||||| ||||| ||||
Sbjct: 64  ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 4   ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
           |||| ||||| |||||||| |||||||  ||||||||||||| |||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82




>42087_osa-MIR444d:mirbase
          Length = 143

 Score =  147 bits (74), Expect = 2e-36
 Identities = 111/121 (91%), Gaps = 3/121 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattg 60
           |||||||||||||||||||||  |||||||||||||||||||||| |||||||||| | |
Sbjct: 14  ggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcacaaaatcattag 73

                                                                       
Query: 61  caagatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcct 120
            | |||  |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 74  -atgat--tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgcct 130

            
Query: 121 c 121
           |
Sbjct: 131 c 131



 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 72  ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 119
           ||||| |||||||||||||  |||||||||||||||| ||||| ||||
Sbjct: 64  ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 4   ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
           |||| ||||| |||||||| |||||||  ||||||||||||| |||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82




>42649_tae-MIR444b:mirbase
          Length = 162

 Score = 93.7 bits (47), Expect = 3e-20
 Identities = 53/55 (96%)
 Strand = Plus / Plus

                                                                  
Query: 67  catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
           |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 98  catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctc 152



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 4   ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
           |||| ||||| |||||||| |||||||  ||||||||||||| |||||
Sbjct: 150 ggcagcaagcttgaggcagcaactgcacgacttgcaagaaagccacaa 103



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 4  ggcaccaagcatgaggcaggaactgcattacttgc 38
          |||||| |||||||||||  |||||||||||||||
Sbjct: 15 ggcaccgagcatgaggcaacaactgcattacttgc 49




>41893_hvu-MIR444a:mirbase
          Length = 114

 Score = 91.7 bits (46), Expect = 1e-19
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                 
Query: 67  catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcct 120
           |||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 61  catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 114



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 4   ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
           |||| ||||| |||||||| |||||||  ||||||||||||| |||||
Sbjct: 113 ggcagcaagcttgaggcagcaactgcacgacttgcaagaaagccacaa 66




>41894_hvu-MIR444b:mirbase
          Length = 121

 Score = 89.7 bits (45), Expect = 4e-19
 Identities = 100/117 (85%), Gaps = 1/117 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattg 60
           |||||||||||||||||||||  ||||||||||||| |||| |||| |||||||| | ||
Sbjct: 1   ggtggcaccaagcatgaggcaacaactgcattactttcaaggaagttacaaaatcta-tg 59

                                                                    
Query: 61  caagatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctg 117
                ||||| | ||| ||||||||||||||||||||||| || |||||||||||||
Sbjct: 60  ggtcttcataatcgtgactttcttgcaagttgtgcagttgctgtctcaagcttgctg 116



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 9   caagcatgaggcaggaactgcattacttgcaagaaagtcac 49
           ||||| |||| ||| |||||||  |||||||||||||||||
Sbjct: 113 caagcttgagacagcaactgcacaacttgcaagaaagtcac 73




>42091_osa-MIR444f:mirbase
          Length = 154

 Score = 87.7 bits (44), Expect = 2e-18
 Identities = 44/44 (100%)
 Strand = Plus / Plus

                                                       
Query: 78  ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 152



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                   
Query: 1  ggtggcaccaagcatgaggcaggaactgcattacttgcaag 41
          |||||||||||||||||||    ||||||||||||||||||
Sbjct: 3  ggtggcaccaagcatgaggttacaactgcattacttgcaag 43



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 4   ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtca 48
           |||| ||||| |||||||  |||||||  ||||||||||||||||
Sbjct: 150 ggcagcaagcttgaggcaacaactgcacaacttgcaagaaagtca 106




>42648_tae-MIR444:mirbase
          Length = 426

 Score = 85.7 bits (43), Expect = 7e-18
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                  
Query: 67  catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
           ||||||||||||||||||||||||  |||||||| ||||||||||||||||||||
Sbjct: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctc 176



 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 4   ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 51
           |||| ||||| |||||||| |||||||| ||||||||||||| |||||
Sbjct: 174 ggcagcaagcttgaggcagcaactgcatgacttgcaagaaagccacaa 127



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 4  ggcaccaagcatgaggcaggaactgcattacttgc 38
          |||||| |||||||||||  |||||||||||||||
Sbjct: 22 ggcaccgagcatgaggcaacaactgcattacttgc 56




>42084_osa-MIR444b:mirbase
          Length = 138

 Score = 77.8 bits (39), Expect = 2e-15
 Identities = 42/43 (97%)
 Strand = Plus / Plus

                                                      
Query: 79  tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
           ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 86  tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctc 128



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 79  tttcttgcaagttgtgcagttgttgcctcaagcttg 114
           ||||||||||| |||||||||| |||| ||||||||
Sbjct: 53  tttcttgcaagatgtgcagttgctgccacaagcttg 18




>42083_osa-MIR444b:mirbase
          Length = 138

 Score = 77.8 bits (39), Expect = 2e-15
 Identities = 42/43 (97%)
 Strand = Plus / Plus

                                                      
Query: 79  tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
           ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 86  tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctc 128



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 79  tttcttgcaagttgtgcagttgttgcctcaagcttg 114
           ||||||||||| |||||||||| |||| ||||||||
Sbjct: 53  tttcttgcaagatgtgcagttgctgccacaagcttg 18




>42480_ssp-MIR444c:mirbase
          Length = 108

 Score = 73.8 bits (37), Expect = 3e-14
 Identities = 40/41 (97%)
 Strand = Plus / Plus

                                                    
Query: 79  tttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 119
           ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 68  tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 79  tttcttgcaagttgtgcagttgttgcctcaagcttg 114
           ||||||||||| | |||||||| |||||| ||||||
Sbjct: 41  tttcttgcaagatatgcagttgctgcctctagcttg 6




>42086_osa-MIR444c:mirbase
          Length = 138

 Score = 69.9 bits (35), Expect = 4e-13
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 79  tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
           ||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 84  tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctc 126




>42085_osa-MIR444c:mirbase
          Length = 138

 Score = 69.9 bits (35), Expect = 4e-13
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                      
Query: 79  tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
           ||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 84  tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctc 126




>42082_osa-MIR444a:mirbase
          Length = 131

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 80  ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
           |||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 81  ttcttgcaagttatgcagttgctgcctcaagcttgctgcctc 122



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 4   ggcaccaagcatgaggcaggaactgcattacttgcaagaa 43
           |||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 120 ggcagcaagcttgaggcagcaactgcataacttgcaagaa 81




>42081_osa-MIR444a:mirbase
          Length = 131

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 80  ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctc 121
           |||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 81  ttcttgcaagttatgcagttgctgcctcaagcttgctgcctc 122



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 4   ggcaccaagcatgaggcaggaactgcattacttgcaagaa 43
           |||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 120 ggcagcaagcttgaggcagcaactgcataacttgcaagaa 81




>42090_osa-MIR444e:mirbase
          Length = 140

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 85  gcaagttgtgcagttgttgcctcaagcttgctgcct 120
           ||||||| |||||||| |||||||||||| ||||||
Sbjct: 91  gcaagttatgcagttgctgcctcaagcttactgcct 126




>41805_bdi-MIR444:mirbase
          Length = 110

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 87  aagttgtgcagttgttgcctcaagcttgctgc 118
           ||||| |||||||| |||||||||||||||||
Sbjct: 79  aagttatgcagttgctgcctcaagcttgctgc 110