miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42079_osa-MIR442:mirbase
          Length = 233

 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 93/107 (86%), Gaps = 5/107 (4%)
 Strand = Plus / Plus

                                                                       
Query: 61  ttgcgagacgaatcttttaagcctaattagtccatgat-taaccataat-tgctacagta 118
           ||||||||||||||||||||||||||||  |||||||| | || ||    ||||||||||
Sbjct: 63  ttgcgagacgaatcttttaagcctaattgctccatgatctgacaatgtggtgctacagta 122

                                                          
Query: 119 acacacatatgctaatgacggattaattagacttaataaattcgtct 165
           |   |||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 123 a---acatttgctaatgacggattaattaggcttaataaattcgtct 166



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 62  tgcgagacgaatcttttaagcctaatta 89
           |||||||||||| | |||||||||||||
Sbjct: 170 tgcgagacgaatttattaagcctaatta 143




>42374_osa-MIR2124e:mirbase
          Length = 247

 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 90/107 (84%), Gaps = 5/107 (4%)
 Strand = Plus / Plus

                                                                       
Query: 61  ttgcgagacgaatcttttaagcctaattagtccatgattaaccataat--tgctacagta 118
           ||||||||||||||||||||||||||||  |||||||||   ||   |  ||||||| ||
Sbjct: 66  ttgcgagacgaatcttttaagcctaattgctccatgatttgacaatgtggtgctacaata 125

                                                          
Query: 119 acacacatatgctaatgacggattaattagacttaataaattcgtct 165
           |   |||| |||||||||| |||||||||||| ||||||||||||||
Sbjct: 126 a---acatttgctaatgacagattaattagacataataaattcgtct 169




>42376_osa-MIR2124g:mirbase
          Length = 251

 Score = 60.0 bits (30), Expect = 8e-10
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 123 acatatgctaatgacggattaattagacttaataaattcgtcttacggtttccaggcg 180
           |||| ||||||| ||| ||||||||| ||||||||||||||||  |||||| ||||||
Sbjct: 131 acatttgctaataacgaattaattagtcttaataaattcgtctcgcggtttacaggcg 188




>42370_osa-MIR2124a:mirbase
          Length = 249

 Score = 60.0 bits (30), Expect = 8e-10
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 128 tgctaatgacggattaattagacttaataaattcgtct 165
           ||||||||||||||||||||| ||||||||||| ||||
Sbjct: 134 tgctaatgacggattaattaggcttaataaatttgtct 171




>42094_osa-MIR445c:mirbase
          Length = 260

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 64  cgagacgaatcttttaagcctaattagtccatgatta 100
           ||||||||||||||||||||||||||  |||||||||
Sbjct: 173 cgagacgaatcttttaagcctaattacaccatgatta 137



 Score = 54.0 bits (27), Expect = 5e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 62  tgcgagacgaatcttttaagcctaattagtccatgatta 100
           |||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 86  tgcgagacgaattttttaagcctaattaatccataatta 124



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 138 ggattaattagacttaataaattcgtct 165
           ||||||||||| ||||| ||||||||||
Sbjct: 117 ggattaattaggcttaaaaaattcgtct 90




>42377_osa-MIR2124h:mirbase
          Length = 275

 Score = 54.0 bits (27), Expect = 5e-08
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 123 acatatgctaatgacggattaattagacttaataaattcgtct 165
           ||||||||||| || ||||||||||| ||||||||||| ||||
Sbjct: 152 acatatgctaacgagggattaattaggcttaataaatttgtct 194



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 64  cgagacgaatcttttaagcctaatt 88
           ||||| |||||||||||||||||||
Sbjct: 81  cgagatgaatcttttaagcctaatt 105




>42373_osa-MIR2124d:mirbase
          Length = 250

 Score = 54.0 bits (27), Expect = 5e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 128 tgctaatgacggattaattagacttaataaattcg 162
           ||||||||||| ||||||||| |||||||||||||
Sbjct: 135 tgctaatgacgaattaattaggcttaataaattcg 169



 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 61 ttgcgagacgaatcttttaagcctaatt 88
          |||||||| |||||||||||||||||||
Sbjct: 69 ttgcgagaggaatcttttaagcctaatt 96




>42099_osa-MIR445h:mirbase
          Length = 277

 Score = 54.0 bits (27), Expect = 5e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 62  tgcgagacgaatcttttaagcctaattagtccatgatta 100
           |||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 94  tgcgagacgaattttttaagcctaattaatccataatta 132



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 63  gcgagacgaatcttttaagcctaattagtccatgatta 100
           |||||||||||||||| || |||||||  |||||||||
Sbjct: 182 gcgagacgaatcttttgagtctaattacaccatgatta 145



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 138 ggattaattagacttaataaattcgtct 165
           ||||||||||| ||||| ||||||||||
Sbjct: 125 ggattaattaggcttaaaaaattcgtct 98




>42098_osa-MIR445g:mirbase
          Length = 275

 Score = 54.0 bits (27), Expect = 5e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 62  tgcgagacgaatcttttaagcctaattagtccatgatta 100
           |||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 93  tgcgagacgaattttttaagcctaattaatccataatta 131



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 138 ggattaattagacttaataaattcgtct 165
           ||||||||||| ||||| ||||||||||
Sbjct: 124 ggattaattaggcttaaaaaattcgtct 97




>42096_osa-MIR445e:mirbase
          Length = 265

 Score = 54.0 bits (27), Expect = 5e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 62  tgcgagacgaatcttttaagcctaattagtccatgatta 100
           |||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 88  tgcgagacgaattttttaagcctaattaatccataatta 126



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 63  gcgagacgaatcttttaagcctaattagtccatgatta 100
           |||||||||||||||| || |||||||  |||||||||
Sbjct: 176 gcgagacgaatcttttgagtctaattacaccatgatta 139



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 138 ggattaattagacttaataaattcgtct 165
           ||||||||||| ||||| ||||||||||
Sbjct: 119 ggattaattaggcttaaaaaattcgtct 92




>42092_osa-MIR445a:mirbase
          Length = 268

 Score = 54.0 bits (27), Expect = 5e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 62  tgcgagacgaatcttttaagcctaattagtccatgatta 100
           |||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 81  tgcgagacgaattttttaagcctaattaatccataatta 119



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 63  gcgagacgaatcttttaagcctaattagtccatgatt 99
           |||||||||||||||| || |||||||  ||||||||
Sbjct: 186 gcgagacgaatcttttgagtctaattacaccatgatt 150



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 138 ggattaattagacttaataaattcgtct 165
           ||||||||||| ||||| ||||||||||
Sbjct: 112 ggattaattaggcttaaaaaattcgtct 85




>42372_osa-MIR2124c:mirbase
          Length = 248

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 128 tgctaatgacggattaattagacttaataaattcgtct 165
           |||||||||  |||||||||| ||||||||||||||||
Sbjct: 133 tgctaatgatagattaattaggcttaataaattcgtct 170



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 61 ttgcgagacgaatcttttaagcctaatt 88
          ||||||||| ||||||||||| ||||||
Sbjct: 67 ttgcgagacaaatcttttaagtctaatt 94




>42371_osa-MIR2124b:mirbase
          Length = 239

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                     
Query: 123 acatatgctaatgacggattaattagacttaataaattcgtcttacggtttccaggcg 180
           |||| |||||||  |||||||||||| |||||||||||||| |  |||||| ||||||
Sbjct: 132 acatttgctaataccggattaattaggcttaataaattcgtgtcgcggtttacaggcg 189




>42378_osa-MIR2124i:mirbase
          Length = 250

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 68  acgaatcttttaagcctaattagtccatgat 98
           |||||||||||||||||||||  ||||||||
Sbjct: 76  acgaatcttttaagcctaattgctccatgat 106




>42097_osa-MIR445f:mirbase
          Length = 305

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 62  tgcgagacgaatcttttaagcctaattagtccatgatta 100
           |||| ||||||| ||||||||||||||| ||||| ||||
Sbjct: 109 tgcgggacgaattttttaagcctaattaatccataatta 147



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 63  gcgagacgaatcttttaagcctaattagtccatgatta 100
           |||||||||||||||| || |||||||  |||||||||
Sbjct: 197 gcgagacgaatcttttgagtctaattacaccatgatta 160




>42093_osa-MIR445b:mirbase
          Length = 264

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 62  tgcgagacgaatcttttaagcctaattagtccatgatta 100
           |||||||||||  ||||||||||||||| ||||| ||||
Sbjct: 87  tgcgagacgaactttttaagcctaattaatccataatta 125



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 63  gcgagacgaatcttttaagcctaattagtccatgatta 100
           |||||||||||||||| || |||||||  |||||||||
Sbjct: 175 gcgagacgaatcttttgagtctaattacaccatgatta 138




>42095_osa-MIR445d:mirbase
          Length = 312

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 75  ttttaagcctaattagtccatgattaac 102
           ||||||||||||||| ||||| ||||||
Sbjct: 195 ttttaagcctaattaatccataattaac 168